RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 IL13P35225 146 aa27.21■■□□□ 1.95
DDX11-220ENST00000542244 FLAD1Q8NFF5 587 aa27.21■■□□□ 1.95
DDX11-220ENST00000542244 GOLGB1Q14789 3259 aaKnown RBP27.21■■□□□ 1.95
DDX11-220ENST00000542244 CHD4Q14839 1912 aa27.21■■□□□ 1.95
DDX11-220ENST00000542244 KDRP35968 1356 aa27.21■■□□□ 1.95
DDX11-220ENST00000542244 PLEKHO1Q53GL0 409 aaPredicted RBP27.2■■□□□ 1.94
DDX11-220ENST00000542244 SULT6B1Q6IMI4 303 aa27.2■■□□□ 1.94
DDX11-220ENST00000542244 GNPATO15228 680 aa27.19■■□□□ 1.94
DDX11-220ENST00000542244 DCAF5Q96JK2 942 aa27.18■■□□□ 1.94
DDX11-220ENST00000542244 ERVV-2B6SEH9 535 aa27.17■■□□□ 1.94
DDX11-220ENST00000542244 RBM42Q9BTD8 480 aaKnown RBP27.17■■□□□ 1.94
DDX11-220ENST00000542244 WWC3Q9ULE0 1092 aa27.17■■□□□ 1.94
DDX11-220ENST00000542244 PER1O15534 1290 aaPredicted RBP27.16■■□□□ 1.94
DDX11-220ENST00000542244 SSFA2P28290 1259 aa27.16■■□□□ 1.94
DDX11-220ENST00000542244 PLEKHG2Q9H7P9 1386 aa27.15■■□□□ 1.94
DDX11-220ENST00000542244 MTHFSP49914 203 aa27.13■■□□□ 1.93
DDX11-220ENST00000542244 CABP4P57796 275 aa27.13■■□□□ 1.93
DDX11-220ENST00000542244 AMOTQ4VCS5 1084 aa27.13■■□□□ 1.93
DDX11-220ENST00000542244 CD2APQ9Y5K6 639 aa27.13■■□□□ 1.93
DDX11-220ENST00000542244 CC2D1BQ5T0F9 858 aaKnown RBP27.12■■□□□ 1.93
DDX11-220ENST00000542244 HSP90AB1P08238 724 aaKnown RBP27.11■■□□□ 1.93
DDX11-220ENST00000542244 NFATC2IPQ8NCF5 419 aa27.11■■□□□ 1.93
DDX11-220ENST00000542244 HMOX1P09601 288 aa27.1■■□□□ 1.93
DDX11-220ENST00000542244 CNGB1Q14028 1251 aaPredicted RBP27.1■■□□□ 1.93
DDX11-220ENST00000542244 PTCD1O75127 700 aaKnown RBP27.09■■□□□ 1.93
DDX11-220ENST00000542244 COL5A3P25940 1745 aaPredicted RBP27.08■■□□□ 1.93
DDX11-220ENST00000542244 HMGB2P26583 209 aaKnown RBP27.08■■□□□ 1.93
DDX11-220ENST00000542244 C1orf141Q5JVX7 400 aa27.08■■□□□ 1.93
DDX11-220ENST00000542244 LGR6Q9HBX8 967 aa27.08■■□□□ 1.93
DDX11-220ENST00000542244 ARHGEF1Q92888 912 aaKnown RBP27.07■■□□□ 1.92
DDX11-220ENST00000542244 MMP10P09238 476 aa27.06■■□□□ 1.92
DDX11-220ENST00000542244 MYH14Q7Z406 1995 aaKnown RBP27.06■■□□□ 1.92
DDX11-220ENST00000542244 ZNF831Q5JPB2 1677 aa27.05■■□□□ 1.92
DDX11-220ENST00000542244 RTCBQ9Y3I0 505 aaKnown RBP27.05■■□□□ 1.92
DDX11-220ENST00000542244 GRIN3BO60391 1043 aa27.04■■□□□ 1.92
DDX11-220ENST00000542244 TRAPPC3LQ5T215 181 aa27.04■■□□□ 1.92
DDX11-220ENST00000542244 RC3H1Q5TC82 1133 aaKnown RBP27.03■■□□□ 1.92
DDX11-220ENST00000542244 CNTNAP4Q9C0A0 1308 aa27.03■■□□□ 1.92
DDX11-220ENST00000542244 RPS6KA4O75676 772 aa27.02■■□□□ 1.92
DDX11-220ENST00000542244 SCN11AQ9UI33 1791 aa27.02■■□□□ 1.92
DDX11-220ENST00000542244 TJP1Q07157 1748 aa27.02■■□□□ 1.92
DDX11-220ENST00000542244 GYS1P13807 737 aa27.01■■□□□ 1.91
DDX11-220ENST00000542244 CRKLP46109 303 aaKnown RBP27■■□□□ 1.91
DDX11-220ENST00000542244 MTHFSDQ2M296 383 aaKnown RBP27■■□□□ 1.91
DDX11-220ENST00000542244 AKAP4Q5JQC9 854 aa27■■□□□ 1.91
DDX11-220ENST00000542244 SRP68Q9UHB9 627 aaKnown RBP27■■□□□ 1.91
DDX11-220ENST00000542244 CICQ96RK0 1608 aaPredicted RBP27■■□□□ 1.91
DDX11-220ENST00000542244 C1QTNF8P60827 252 aa26.99■■□□□ 1.91
DDX11-220ENST00000542244 SLC39A6Q13433 755 aa26.99■■□□□ 1.91
DDX11-220ENST00000542244 COL3A1P02461 1466 aaPredicted RBP26.99■■□□□ 1.91
DDX11-220ENST00000542244 KIAA1551Q9HCM1 1747 aa26.99■■□□□ 1.91
DDX11-220ENST00000542244 RNMTO43148 476 aaKnown RBP26.98■■□□□ 1.91
DDX11-220ENST00000542244 C4AP0C0L4 1744 aa26.98■■□□□ 1.91
DDX11-220ENST00000542244 DIAPH1O60610 1272 aaKnown RBP26.97■■□□□ 1.91
DDX11-220ENST00000542244 INTS5Q6P9B9 1019 aaKnown RBP26.97■■□□□ 1.91
DDX11-220ENST00000542244 SLC52A2Q9HAB3 445 aa26.97■■□□□ 1.91
DDX11-220ENST00000542244 PXDNLA1KZ92 1463 aa26.97■■□□□ 1.91
DDX11-220ENST00000542244 DNAJC10Q8IXB1 793 aa26.96■■□□□ 1.91
DDX11-220ENST00000542244 RFC4P35249 363 aa26.95■■□□□ 1.9
DDX11-220ENST00000542244 ATP10DQ9P241 1426 aa26.95■■□□□ 1.9
DDX11-220ENST00000542244 A0A0G2JLW4 131 aa26.94■■□□□ 1.9
DDX11-220ENST00000542244 ADRA2BP18089 450 aa26.94■■□□□ 1.9
DDX11-220ENST00000542244 NLGN1Q8N2Q7 840 aa26.94■■□□□ 1.9
DDX11-220ENST00000542244 MRC1P22897 1456 aa26.93■■□□□ 1.9
DDX11-220ENST00000542244 C10orf71Q711Q0 1435 aa26.93■■□□□ 1.9
DDX11-220ENST00000542244 N4BP2Q86UW6 1770 aaPredicted RBP26.93■■□□□ 1.9
DDX11-220ENST00000542244 ADAMTS7Q9UKP4 1686 aa26.92■■□□□ 1.9
DDX11-220ENST00000542244 FKBP8Q14318 412 aa26.92■■□□□ 1.9
DDX11-220ENST00000542244 ADCY9O60503 1353 aa26.92■■□□□ 1.9
DDX11-220ENST00000542244 KIF13BQ9NQT8 1826 aa26.92■■□□□ 1.9
DDX11-220ENST00000542244 KCPQ6ZWJ8 1503 aa26.91■■□□□ 1.9
DDX11-220ENST00000542244 NPC1L1Q9UHC9 1359 aa26.9■■□□□ 1.9
DDX11-220ENST00000542244 GIGYF1O75420 1035 aaPredicted RBP26.9■■□□□ 1.9
DDX11-220ENST00000542244 DDR1Q08345 913 aa26.9■■□□□ 1.9
DDX11-220ENST00000542244 VIRMAQ69YN4 1812 aaKnown RBP26.89■■□□□ 1.9
DDX11-220ENST00000542244 SENP3-EIF4A1A0A087X0R7 540 aa26.89■■□□□ 1.9
DDX11-220ENST00000542244 DPEP1P16444 411 aa26.89■■□□□ 1.9
DDX11-220ENST00000542244 ZNF526Q8TF50 670 aaPredicted RBP26.89■■□□□ 1.9
DDX11-220ENST00000542244 USP42Q9H9J4 1324 aaKnown RBP26.89■■□□□ 1.89
DDX11-220ENST00000542244 U2SURPO15042 1029 aaKnown RBP26.88■■□□□ 1.89
DDX11-220ENST00000542244 CYP19A1P11511 503 aaPredicted RBP26.88■■□□□ 1.89
DDX11-220ENST00000542244 CCDC87Q9NVE4 849 aa26.87■■□□□ 1.89
DDX11-220ENST00000542244 KCNA3P22001 575 aa26.86■■□□□ 1.89
DDX11-220ENST00000542244 PARP3Q9Y6F1 533 aa26.86■■□□□ 1.89
DDX11-220ENST00000542244 TGFB2P61812 414 aa26.85■■□□□ 1.89
DDX11-220ENST00000542244 IL17REQ8NFR9 667 aa26.85■■□□□ 1.89
DDX11-220ENST00000542244 BCS1LQ9Y276 419 aa26.85■■□□□ 1.89
DDX11-220ENST00000542244 SOS1Q07889 1333 aaPredicted RBP26.85■■□□□ 1.89
DDX11-220ENST00000542244 ZBTB1Q9Y2K1 713 aa26.84■■□□□ 1.89
DDX11-220ENST00000542244 USPL1Q5W0Q7 1092 aa26.83■■□□□ 1.89
DDX11-220ENST00000542244 PHACTR3Q96KR7 559 aa26.83■■□□□ 1.89
DDX11-220ENST00000542244 TM4SF1P30408 202 aa26.81■■□□□ 1.88
DDX11-220ENST00000542244 BCL2L12Q9HB09 334 aa26.81■■□□□ 1.88
DDX11-220ENST00000542244 POLRMTO00411 1230 aaKnown RBP26.8■■□□□ 1.88
DDX11-220ENST00000542244 UBR2Q8IWV8 1755 aa26.79■■□□□ 1.88
DDX11-220ENST00000542244 CHRNA5P30532 468 aa26.79■■□□□ 1.88
DDX11-220ENST00000542244 GPBP1L1Q9HC44 474 aaPredicted RBP26.78■■□□□ 1.88
DDX11-220ENST00000542244 BRCA1P38398 1863 aaKnown RBP26.77■■□□□ 1.88
DDX11-220ENST00000542244 KCNQ3O43525 872 aa26.77■■□□□ 1.88
DDX11-220ENST00000542244 FCHSD2O94868 740 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms