RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 ITGB4P16144 1822 aa23.49■■□□□ 1.35
TRPT1-212ENST00000542040 C5P01031 1676 aa23.49■■□□□ 1.35
TRPT1-212ENST00000542040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.49■■□□□ 1.35
TRPT1-212ENST00000542040 PHF14O94880 888 aa23.49■■□□□ 1.35
TRPT1-212ENST00000542040 GNPATO15228 680 aa23.48■■□□□ 1.35
TRPT1-212ENST00000542040 CNGB1Q14028 1251 aaPredicted RBP23.48■■□□□ 1.35
TRPT1-212ENST00000542040 RTCBQ9Y3I0 505 aaKnown RBP23.48■■□□□ 1.35
TRPT1-212ENST00000542040 TOGARAM1Q9Y4F4 1720 aa23.47■■□□□ 1.35
TRPT1-212ENST00000542040 TRAPPC3LQ5T215 181 aa23.47■■□□□ 1.35
TRPT1-212ENST00000542040 NFATC2IPQ8NCF5 419 aa23.47■■□□□ 1.35
TRPT1-212ENST00000542040 LINC00116Q8NCU8 138 aa23.47■■□□□ 1.35
TRPT1-212ENST00000542040 NUDCQ9Y266 331 aa23.47■■□□□ 1.35
TRPT1-212ENST00000542040 HMOX1P09601 288 aa23.46■■□□□ 1.35
TRPT1-212ENST00000542040 RC3H1Q5TC82 1133 aaKnown RBP23.46■■□□□ 1.35
TRPT1-212ENST00000542040 MSL1Q68DK7 614 aa23.46■■□□□ 1.35
TRPT1-212ENST00000542040 C4BP0C0L5 1744 aa23.45■■□□□ 1.34
TRPT1-212ENST00000542040 U2SURPO15042 1029 aaKnown RBP23.45■■□□□ 1.34
TRPT1-212ENST00000542040 ADRA2BP18089 450 aa23.45■■□□□ 1.34
TRPT1-212ENST00000542040 CD2APQ9Y5K6 639 aa23.45■■□□□ 1.34
TRPT1-212ENST00000542040 ITPK1Q13572 414 aa23.44■■□□□ 1.34
TRPT1-212ENST00000542040 PELP1Q8IZL8 1130 aaKnown RBP23.44■■□□□ 1.34
TRPT1-212ENST00000542040 GRIN3BO60391 1043 aa23.43■■□□□ 1.34
TRPT1-212ENST00000542040 KDM6AO15550 1401 aaPredicted RBP23.42■■□□□ 1.34
TRPT1-212ENST00000542040 PTCD1O75127 700 aaKnown RBP23.41■■□□□ 1.34
TRPT1-212ENST00000542040 NLGN1Q8N2Q7 840 aa23.41■■□□□ 1.34
TRPT1-212ENST00000542040 GAS2L2Q8NHY3 880 aa23.41■■□□□ 1.34
TRPT1-212ENST00000542040 SLC52A2Q9HAB3 445 aa23.41■■□□□ 1.34
TRPT1-212ENST00000542040 CNTNAP4Q9C0A0 1308 aa23.4■■□□□ 1.34
TRPT1-212ENST00000542040 RFC4P35249 363 aa23.4■■□□□ 1.34
TRPT1-212ENST00000542040 TAF1LQ8IZX4 1826 aa23.4■■□□□ 1.34
TRPT1-212ENST00000542040 TUBGCP6Q96RT7 1819 aa23.39■■□□□ 1.33
TRPT1-212ENST00000542040 RNMTO43148 476 aaKnown RBP23.39■■□□□ 1.33
TRPT1-212ENST00000542040 RPS6KA4O75676 772 aa23.38■■□□□ 1.33
TRPT1-212ENST00000542040 MTHFSDQ2M296 383 aaKnown RBP23.38■■□□□ 1.33
TRPT1-212ENST00000542040 COL24A1Q17RW2 1714 aa23.37■■□□□ 1.33
TRPT1-212ENST00000542040 GNAT3A8MTJ3 354 aa23.35■■□□□ 1.33
TRPT1-212ENST00000542040 NEFMP07197 916 aa23.35■■□□□ 1.33
TRPT1-212ENST00000542040 TTC5Q8N0Z6 440 aa23.35■■□□□ 1.33
TRPT1-212ENST00000542040 NLGN2Q8NFZ4 835 aa23.35■■□□□ 1.33
TRPT1-212ENST00000542040 LGR6Q9HBX8 967 aa23.35■■□□□ 1.33
TRPT1-212ENST00000542040 TEFQ10587 303 aa23.34■■□□□ 1.33
TRPT1-212ENST00000542040 ARHGEF1Q92888 912 aaKnown RBP23.34■■□□□ 1.33
TRPT1-212ENST00000542040 ZNF831Q5JPB2 1677 aa23.34■■□□□ 1.33
TRPT1-212ENST00000542040 SLC4A9Q96Q91 983 aa23.33■■□□□ 1.33
TRPT1-212ENST00000542040 CRKLP46109 303 aaKnown RBP23.32■■□□□ 1.32
TRPT1-212ENST00000542040 AMIGO3Q86WK7 504 aa23.32■■□□□ 1.32
TRPT1-212ENST00000542040 VSIG10Q8N0Z9 540 aa23.31■■□□□ 1.32
TRPT1-212ENST00000542040 PARP3Q9Y6F1 533 aa23.31■■□□□ 1.32
TRPT1-212ENST00000542040 UBR3Q6ZT12 1888 aa23.3■■□□□ 1.32
TRPT1-212ENST00000542040 MMP10P09238 476 aa23.3■■□□□ 1.32
TRPT1-212ENST00000542040 U2AF1L5P0DN76 240 aaPredicted RBP23.3■■□□□ 1.32
TRPT1-212ENST00000542040 PPP2R1AP30153 589 aa23.3■■□□□ 1.32
TRPT1-212ENST00000542040 U2AF1Q01081 240 aaKnown RBP eCLIP23.3■■□□□ 1.32
TRPT1-212ENST00000542040 SMIM5Q71RC9 77 aa23.3■■□□□ 1.32
TRPT1-212ENST00000542040 CCDC87Q9NVE4 849 aa23.3■■□□□ 1.32
TRPT1-212ENST00000542040 ZPR1O75312 459 aa23.29■■□□□ 1.32
TRPT1-212ENST00000542040 FCHSD2O94868 740 aa23.29■■□□□ 1.32
TRPT1-212ENST00000542040 RTF1Q92541 710 aaKnown RBP23.29■■□□□ 1.32
TRPT1-212ENST00000542040 TEX13AQ9BXU3 409 aaPredicted RBP23.29■■□□□ 1.32
TRPT1-212ENST00000542040 STARD3NLO95772 234 aa23.28■■□□□ 1.32
TRPT1-212ENST00000542040 PNNQ9H307 717 aaKnown RBP23.28■■□□□ 1.32
TRPT1-212ENST00000542040 PRKAR2BP31323 418 aa23.27■■□□□ 1.32
TRPT1-212ENST00000542040 TGFB2P61812 414 aa23.27■■□□□ 1.32
TRPT1-212ENST00000542040 NPM2Q86SE8 214 aaKnown RBP23.27■■□□□ 1.32
TRPT1-212ENST00000542040 COL3A1P02461 1466 aaPredicted RBP23.26■■□□□ 1.31
TRPT1-212ENST00000542040 SLC39A6Q13433 755 aa23.26■■□□□ 1.31
TRPT1-212ENST00000542040 SCN11AQ9UI33 1791 aa23.26■■□□□ 1.31
TRPT1-212ENST00000542040 GYS1P13807 737 aa23.25■■□□□ 1.31
TRPT1-212ENST00000542040 DNAJC10Q8IXB1 793 aa23.25■■□□□ 1.31
TRPT1-212ENST00000542040 ZNF784Q8NCA9 323 aaPredicted RBP23.25■■□□□ 1.31
TRPT1-212ENST00000542040 RSPH6AQ9H0K4 717 aa23.24■■□□□ 1.31
TRPT1-212ENST00000542040 MRC1P22897 1456 aa23.24■■□□□ 1.31
TRPT1-212ENST00000542040 INTS5Q6P9B9 1019 aaKnown RBP23.23■■□□□ 1.31
TRPT1-212ENST00000542040 A0A087WZG4 1122 aa23.22■■□□□ 1.31
TRPT1-212ENST00000542040 CYP19A1P11511 503 aaPredicted RBP23.22■■□□□ 1.31
TRPT1-212ENST00000542040 YBX3P16989 372 aaKnown RBP eCLIP23.22■■□□□ 1.31
TRPT1-212ENST00000542040 HTATSF1O43719 755 aaKnown RBP23.21■■□□□ 1.31
TRPT1-212ENST00000542040 ZNF790Q6PG37 636 aa23.21■■□□□ 1.31
TRPT1-212ENST00000542040 IL17REQ8NFR9 667 aa23.21■■□□□ 1.31
TRPT1-212ENST00000542040 FMNL2Q96PY5 1086 aa23.21■■□□□ 1.31
TRPT1-212ENST00000542040 USP42Q9H9J4 1324 aaKnown RBP23.21■■□□□ 1.31
TRPT1-212ENST00000542040 BTBD11A6QL63 1104 aa23.2■■□□□ 1.3
TRPT1-212ENST00000542040 CHD4Q14839 1912 aa23.2■■□□□ 1.3
TRPT1-212ENST00000542040 COL5A3P25940 1745 aaPredicted RBP23.19■■□□□ 1.3
TRPT1-212ENST00000542040 PHACTR3Q96KR7 559 aa23.18■■□□□ 1.3
TRPT1-212ENST00000542040 SOS1Q07889 1333 aaPredicted RBP23.17■■□□□ 1.3
TRPT1-212ENST00000542040 RALBP1Q15311 655 aa23.17■■□□□ 1.3
TRPT1-212ENST00000542040 NARFQ9UHQ1 456 aa23.17■■□□□ 1.3
TRPT1-212ENST00000542040 SRP68Q9UHB9 627 aaKnown RBP23.16■■□□□ 1.3
TRPT1-212ENST00000542040 CICQ96RK0 1608 aaPredicted RBP23.15■■□□□ 1.3
TRPT1-212ENST00000542040 CANXP27824 592 aaKnown RBP23.15■■□□□ 1.3
TRPT1-212ENST00000542040 FKBP8Q14318 412 aa23.15■■□□□ 1.3
TRPT1-212ENST00000542040 USPL1Q5W0Q7 1092 aa23.15■■□□□ 1.3
TRPT1-212ENST00000542040 CEMIPQ8WUJ3 1361 aa23.14■■□□□ 1.3
TRPT1-212ENST00000542040 HEG1Q9ULI3 1381 aa23.14■■□□□ 1.3
TRPT1-212ENST00000542040 ADAMTS7Q9UKP4 1686 aa23.14■■□□□ 1.29
TRPT1-212ENST00000542040 ZNF496Q96IT1 587 aaPredicted RBP23.14■■□□□ 1.29
TRPT1-212ENST00000542040 COL15A1P39059 1388 aa23.14■■□□□ 1.29
TRPT1-212ENST00000542040 ZBTB1Q9Y2K1 713 aa23.13■■□□□ 1.29
TRPT1-212ENST00000542040 A0A0G2JLW4 131 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms