RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 DEPDC4Q8N2C3 294 aa10.06□□□□□ -0.8
CIT-211ENST00000541841 SERTAD1Q9UHV2 236 aa10.06□□□□□ -0.8
CIT-211ENST00000541841 ADAMTS2O95450 1211 aa10.05□□□□□ -0.8
CIT-211ENST00000541841 FLIIQ13045 1269 aa10.05□□□□□ -0.8
CIT-211ENST00000541841 MAP7D1Q3KQU3 841 aa10.05□□□□□ -0.8
CIT-211ENST00000541841 SVOPQ8N4V2 548 aa10.05□□□□□ -0.8
CIT-211ENST00000541841 CLUAP1Q96AJ1 413 aa10.05□□□□□ -0.8
CIT-211ENST00000541841 SIRT1Q96EB6 747 aa10.04□□□□□ -0.8
CIT-211ENST00000541841 ARXQ96QS3 562 aa10.04□□□□□ -0.8
CIT-211ENST00000541841 F11P03951 625 aa10.03□□□□□ -0.8
CIT-211ENST00000541841 INHAP05111 366 aa10.03□□□□□ -0.8
CIT-211ENST00000541841 SLURP2P0DP57 97 aa10.03□□□□□ -0.8
CIT-211ENST00000541841 TMEM132AQ24JP5 1023 aa10.03□□□□□ -0.8
CIT-211ENST00000541841 GNASQ5JWF2 1037 aa10.03□□□□□ -0.8
CIT-211ENST00000541841 NUCKS1Q9H1E3 243 aaKnown RBP10.03□□□□□ -0.8
CIT-211ENST00000541841 TMEM229AB2RXF0 380 aa10.02□□□□□ -0.81
CIT-211ENST00000541841 NCOA4Q13772 614 aa10.02□□□□□ -0.81
CIT-211ENST00000541841 WDR44Q5JSH3 913 aa10.02□□□□□ -0.81
CIT-211ENST00000541841 WWC1Q8IX03 1113 aa10.02□□□□□ -0.81
CIT-211ENST00000541841 RUBCNLQ9H714 662 aa10.02□□□□□ -0.81
CIT-211ENST00000541841 H7C1W4 665 aa10.01□□□□□ -0.81
CIT-211ENST00000541841 GTF2E1P29083 439 aaPredicted RBP10.01□□□□□ -0.81
CIT-211ENST00000541841 PLA2G4AP47712 749 aa10.01□□□□□ -0.81
CIT-211ENST00000541841 LYPD4Q6UWN0 246 aa10.01□□□□□ -0.81
CIT-211ENST00000541841 ADAMTS8Q9UP79 889 aa10.01□□□□□ -0.81
CIT-211ENST00000541841 PCDHGA11Q9Y5H2 935 aa10.01□□□□□ -0.81
CIT-211ENST00000541841 USP3Q9Y6I4 520 aa10.01□□□□□ -0.81
CIT-211ENST00000541841 MSX1P28360 303 aa10□□□□□ -0.81
CIT-211ENST00000541841 EML3Q32P44 896 aa10□□□□□ -0.81
CIT-211ENST00000541841 PPARGC1BQ86YN6 1023 aaKnown RBP10□□□□□ -0.81
CIT-211ENST00000541841 RHBDD1Q8TEB9 315 aa10□□□□□ -0.81
CIT-211ENST00000541841 A0A1B0GTH6 734 aa9.99□□□□□ -0.81
CIT-211ENST00000541841 USP17L5A8MUK1 530 aa9.99□□□□□ -0.81
CIT-211ENST00000541841 GTF2IP78347 998 aa9.99□□□□□ -0.81
CIT-211ENST00000541841 SRSF11Q05519 484 aaKnown RBP9.99□□□□□ -0.81
CIT-211ENST00000541841 HDGFL1Q5TGJ6 251 aa9.99□□□□□ -0.81
CIT-211ENST00000541841 FOXR1Q6PIV2 292 aa9.99□□□□□ -0.81
CIT-211ENST00000541841 GMCL1Q96IK5 515 aa9.99□□□□□ -0.81
CIT-211ENST00000541841 UCN2Q96RP3 112 aa9.99□□□□□ -0.81
CIT-211ENST00000541841 SMTNP53814 917 aa9.98□□□□□ -0.81
CIT-211ENST00000541841 MBIPQ9NS73 344 aa9.98□□□□□ -0.81
CIT-211ENST00000541841 IGF1RP08069 1367 aa9.98□□□□□ -0.81
CIT-211ENST00000541841 ARHGEF15O94989 841 aa9.97□□□□□ -0.81
CIT-211ENST00000541841 PSME1Q06323 249 aa9.97□□□□□ -0.81
CIT-211ENST00000541841 TBC1D9Q6ZT07 1266 aa9.97□□□□□ -0.81
CIT-211ENST00000541841 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
CIT-211ENST00000541841 TRERF1Q96PN7 1200 aa9.97□□□□□ -0.81
CIT-211ENST00000541841 NOD1Q9Y239 953 aa9.97□□□□□ -0.81
CIT-211ENST00000541841 CELA2BP08218 269 aaPredicted RBP9.96□□□□□ -0.82
CIT-211ENST00000541841 UBAP2LQ14157 1087 aaKnown RBP9.95□□□□□ -0.82
CIT-211ENST00000541841 AIDAQ96BJ3 306 aa9.95□□□□□ -0.82
CIT-211ENST00000541841 PARP3Q9Y6F1 533 aa9.95□□□□□ -0.82
CIT-211ENST00000541841 A6NJY4 79 aa9.94□□□□□ -0.82
CIT-211ENST00000541841 MX2P20592 715 aa9.94□□□□□ -0.82
CIT-211ENST00000541841 GSK3AP49840 483 aa9.94□□□□□ -0.82
CIT-211ENST00000541841 NFATC2IPQ8NCF5 419 aa9.94□□□□□ -0.82
CIT-211ENST00000541841 ACDQ96AP0 544 aa9.94□□□□□ -0.82
CIT-211ENST00000541841 ZNF358Q9NW07 568 aa9.94□□□□□ -0.82
CIT-211ENST00000541841 KIAA1024Q9UPX6 916 aa9.94□□□□□ -0.82
CIT-211ENST00000541841 CSB-PGBD3P0DP91 1061 aa9.93□□□□□ -0.82
CIT-211ENST00000541841 ATP4AP20648 1035 aa9.93□□□□□ -0.82
CIT-211ENST00000541841 TBCELQ5QJ74 424 aa9.93□□□□□ -0.82
CIT-211ENST00000541841 PROSER2Q86WR7 435 aaPredicted RBP9.93□□□□□ -0.82
CIT-211ENST00000541841 ZNF295-AS1Q8N0V1 137 aa9.93□□□□□ -0.82
CIT-211ENST00000541841 PGBD3Q8N328 593 aa9.93□□□□□ -0.82
CIT-211ENST00000541841 IQSEC3Q9UPP2 1182 aaPredicted RBP9.93□□□□□ -0.82
CIT-211ENST00000541841 USP17L3A6NCW0 530 aa9.92□□□□□ -0.82
CIT-211ENST00000541841 USP17L4A6NCW7 530 aa9.92□□□□□ -0.82
CIT-211ENST00000541841 USP17L2Q6R6M4 530 aa9.92□□□□□ -0.82
CIT-211ENST00000541841 ERICH6Q7L0X2 663 aa9.92□□□□□ -0.82
CIT-211ENST00000541841 USP17L1Q7RTZ2 530 aa9.92□□□□□ -0.82
CIT-211ENST00000541841 FNBP4Q8N3X1 1017 aaPredicted RBP9.92□□□□□ -0.82
CIT-211ENST00000541841 ABHD17AQ96GS6 310 aa9.92□□□□□ -0.82
CIT-211ENST00000541841 SLC4A9Q96Q91 983 aa9.92□□□□□ -0.82
CIT-211ENST00000541841 NIFKQ9BYG3 293 aaKnown RBP9.92□□□□□ -0.82
CIT-211ENST00000541841 MTFR1Q15390 333 aa9.91□□□□□ -0.82
CIT-211ENST00000541841 GLMNQ92990 594 aa9.91□□□□□ -0.82
CIT-211ENST00000541841 CABP1Q9NZU7 370 aa9.91□□□□□ -0.82
CIT-211ENST00000541841 CLDN10P78369 228 aa9.9□□□□□ -0.82
CIT-211ENST00000541841 MAP3K10Q02779 954 aa9.9□□□□□ -0.82
CIT-211ENST00000541841 EFHC2Q5JST6 749 aa9.9□□□□□ -0.82
CIT-211ENST00000541841 CDK2AP1O14519 115 aa9.89□□□□□ -0.83
CIT-211ENST00000541841 ATP9BO43861 1147 aa9.89□□□□□ -0.83
CIT-211ENST00000541841 BNIP3LO60238 219 aa9.89□□□□□ -0.83
CIT-211ENST00000541841 TNS4Q8IZW8 715 aa9.89□□□□□ -0.83
CIT-211ENST00000541841 TPCN2Q8NHX9 752 aa9.89□□□□□ -0.83
CIT-211ENST00000541841 ZDHHC1Q8WTX9 485 aa9.89□□□□□ -0.83
CIT-211ENST00000541841 ZBTB7BO15156 539 aaPredicted RBP9.88□□□□□ -0.83
CIT-211ENST00000541841 LZTS3O60299 673 aaPredicted RBP9.88□□□□□ -0.83
CIT-211ENST00000541841 MARSP56192 900 aaKnown RBP9.88□□□□□ -0.83
CIT-211ENST00000541841 KCNMA1Q12791 1236 aa9.88□□□□□ -0.83
CIT-211ENST00000541841 C14orf37Q86TY3 774 aa9.88□□□□□ -0.83
CIT-211ENST00000541841 CFHR5Q9BXR6 569 aa9.88□□□□□ -0.83
CIT-211ENST00000541841 CRISPLD1Q9H336 500 aa9.88□□□□□ -0.83
CIT-211ENST00000541841 DNAAF2Q9NVR5 837 aaKnown RBP9.88□□□□□ -0.83
CIT-211ENST00000541841 HCN2Q9UL51 889 aa9.88□□□□□ -0.83
CIT-211ENST00000541841 C2CD2LO14523 706 aa9.87□□□□□ -0.83
CIT-211ENST00000541841 IRS1P35568 1242 aa9.87□□□□□ -0.83
CIT-211ENST00000541841 TXLNAP40222 546 aa9.87□□□□□ -0.83
CIT-211ENST00000541841 CTBSQ01459 385 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms