RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.74■□□□□ 0.75
MSRB3-209ENST00000540804 GPR162Q16538 588 aa19.74■□□□□ 0.75
MSRB3-209ENST00000540804 SLC4A9Q96Q91 983 aa19.74■□□□□ 0.75
MSRB3-209ENST00000540804 MTHFSP49914 203 aa19.73■□□□□ 0.75
MSRB3-209ENST00000540804 FLAD1Q8NFF5 587 aa19.72■□□□□ 0.75
MSRB3-209ENST00000540804 DCAF5Q96JK2 942 aa19.72■□□□□ 0.75
MSRB3-209ENST00000540804 RBM42Q9BTD8 480 aaKnown RBP19.72■□□□□ 0.75
MSRB3-209ENST00000540804 ERVV-2B6SEH9 535 aa19.71■□□□□ 0.75
MSRB3-209ENST00000540804 GNPATO15228 680 aa19.71■□□□□ 0.75
MSRB3-209ENST00000540804 AMOTQ4VCS5 1084 aa19.71■□□□□ 0.75
MSRB3-209ENST00000540804 HMOX1P09601 288 aa19.7■□□□□ 0.74
MSRB3-209ENST00000540804 CABP4P57796 275 aa19.7■□□□□ 0.74
MSRB3-209ENST00000540804 KDRP35968 1356 aa19.7■□□□□ 0.74
MSRB3-209ENST00000540804 HSP90AB1P08238 724 aaKnown RBP19.69■□□□□ 0.74
MSRB3-209ENST00000540804 PLEKHG2Q9H7P9 1386 aa19.69■□□□□ 0.74
MSRB3-209ENST00000540804 YBX3P16989 372 aaKnown RBP eCLIP19.68■□□□□ 0.74
MSRB3-209ENST00000540804 C1orf141Q5JVX7 400 aa19.68■□□□□ 0.74
MSRB3-209ENST00000540804 ZNF784Q8NCA9 323 aaPredicted RBP19.68■□□□□ 0.74
MSRB3-209ENST00000540804 SSFA2P28290 1259 aa19.67■□□□□ 0.74
MSRB3-209ENST00000540804 NFATC2IPQ8NCF5 419 aa19.67■□□□□ 0.74
MSRB3-209ENST00000540804 UBR3Q6ZT12 1888 aa19.67■□□□□ 0.74
MSRB3-209ENST00000540804 GOLGB1Q14789 3259 aaKnown RBP19.66■□□□□ 0.74
MSRB3-209ENST00000540804 PTCD1O75127 700 aaKnown RBP19.66■□□□□ 0.74
MSRB3-209ENST00000540804 WWC3Q9ULE0 1092 aa19.66■□□□□ 0.74
MSRB3-209ENST00000540804 LGR6Q9HBX8 967 aa19.65■□□□□ 0.74
MSRB3-209ENST00000540804 HMGB2P26583 209 aaKnown RBP19.64■□□□□ 0.73
MSRB3-209ENST00000540804 DIAPH1O60610 1272 aaKnown RBP19.63■□□□□ 0.73
MSRB3-209ENST00000540804 MTHFSDQ2M296 383 aaKnown RBP19.62■□□□□ 0.73
MSRB3-209ENST00000540804 AKAP4Q5JQC9 854 aa19.62■□□□□ 0.73
MSRB3-209ENST00000540804 CD2APQ9Y5K6 639 aa19.62■□□□□ 0.73
MSRB3-209ENST00000540804 ARHGEF1Q92888 912 aaKnown RBP19.61■□□□□ 0.73
MSRB3-209ENST00000540804 RTCBQ9Y3I0 505 aaKnown RBP19.61■□□□□ 0.73
MSRB3-209ENST00000540804 TRAPPC3LQ5T215 181 aa19.6■□□□□ 0.73
MSRB3-209ENST00000540804 CNTNAP4Q9C0A0 1308 aa19.59■□□□□ 0.73
MSRB3-209ENST00000540804 MMP10P09238 476 aa19.59■□□□□ 0.73
MSRB3-209ENST00000540804 COL3A1P02461 1466 aaPredicted RBP19.59■□□□□ 0.73
MSRB3-209ENST00000540804 U2SURPO15042 1029 aaKnown RBP19.58■□□□□ 0.72
MSRB3-209ENST00000540804 RNMTO43148 476 aaKnown RBP19.58■□□□□ 0.72
MSRB3-209ENST00000540804 RPS6KA4O75676 772 aa19.58■□□□□ 0.72
MSRB3-209ENST00000540804 SLC39A6Q13433 755 aa19.58■□□□□ 0.72
MSRB3-209ENST00000540804 RC3H1Q5TC82 1133 aaKnown RBP19.58■□□□□ 0.72
MSRB3-209ENST00000540804 SLC52A2Q9HAB3 445 aa19.58■□□□□ 0.72
MSRB3-209ENST00000540804 CRKLP46109 303 aaKnown RBP19.57■□□□□ 0.72
MSRB3-209ENST00000540804 NPC1L1Q9UHC9 1359 aa19.57■□□□□ 0.72
MSRB3-209ENST00000540804 GYS1P13807 737 aa19.56■□□□□ 0.72
MSRB3-209ENST00000540804 SRP68Q9UHB9 627 aaKnown RBP19.56■□□□□ 0.72
MSRB3-209ENST00000540804 COL5A3P25940 1745 aaPredicted RBP19.56■□□□□ 0.72
MSRB3-209ENST00000540804 GRIN3BO60391 1043 aa19.55■□□□□ 0.72
MSRB3-209ENST00000540804 RFC4P35249 363 aa19.55■□□□□ 0.72
MSRB3-209ENST00000540804 DNAJC10Q8IXB1 793 aa19.55■□□□□ 0.72
MSRB3-209ENST00000540804 ZNF831Q5JPB2 1677 aa19.55■□□□□ 0.72
MSRB3-209ENST00000540804 INTS5Q6P9B9 1019 aaKnown RBP19.54■□□□□ 0.72
MSRB3-209ENST00000540804 TJP1Q07157 1748 aa19.54■□□□□ 0.72
MSRB3-209ENST00000540804 SCN11AQ9UI33 1791 aa19.53■□□□□ 0.72
MSRB3-209ENST00000540804 CICQ96RK0 1608 aaPredicted RBP19.52■□□□□ 0.72
MSRB3-209ENST00000540804 ADRA2BP18089 450 aa19.52■□□□□ 0.72
MSRB3-209ENST00000540804 NLGN1Q8N2Q7 840 aa19.52■□□□□ 0.72
MSRB3-209ENST00000540804 MRC1P22897 1456 aa19.52■□□□□ 0.72
MSRB3-209ENST00000540804 CHD4Q14839 1912 aa19.51■□□□□ 0.71
MSRB3-209ENST00000540804 MYH14Q7Z406 1995 aaKnown RBP19.5■□□□□ 0.71
MSRB3-209ENST00000540804 A0A0G2JLW4 131 aa19.5■□□□□ 0.71
MSRB3-209ENST00000540804 FKBP8Q14318 412 aa19.5■□□□□ 0.71
MSRB3-209ENST00000540804 IL17REQ8NFR9 667 aa19.5■□□□□ 0.71
MSRB3-209ENST00000540804 KCPQ6ZWJ8 1503 aa19.5■□□□□ 0.71
MSRB3-209ENST00000540804 CYP19A1P11511 503 aaPredicted RBP19.49■□□□□ 0.71
MSRB3-209ENST00000540804 PHACTR3Q96KR7 559 aa19.49■□□□□ 0.71
MSRB3-209ENST00000540804 PXDNLA1KZ92 1463 aa19.48■□□□□ 0.71
MSRB3-209ENST00000540804 C4AP0C0L4 1744 aa19.48■□□□□ 0.71
MSRB3-209ENST00000540804 PPP2R1AP30153 589 aa19.48■□□□□ 0.71
MSRB3-209ENST00000540804 CCDC87Q9NVE4 849 aa19.48■□□□□ 0.71
MSRB3-209ENST00000540804 PARP3Q9Y6F1 533 aa19.48■□□□□ 0.71
MSRB3-209ENST00000540804 USP42Q9H9J4 1324 aaKnown RBP19.48■□□□□ 0.71
MSRB3-209ENST00000540804 ADAMTS7Q9UKP4 1686 aa19.47■□□□□ 0.71
MSRB3-209ENST00000540804 DDR1Q08345 913 aa19.47■□□□□ 0.71
MSRB3-209ENST00000540804 ZBTB1Q9Y2K1 713 aa19.47■□□□□ 0.71
MSRB3-209ENST00000540804 C10orf71Q711Q0 1435 aa19.47■□□□□ 0.71
MSRB3-209ENST00000540804 DPEP1P16444 411 aa19.46■□□□□ 0.71
MSRB3-209ENST00000540804 PRKAR2BP31323 418 aa19.46■□□□□ 0.71
MSRB3-209ENST00000540804 USPL1Q5W0Q7 1092 aa19.46■□□□□ 0.71
MSRB3-209ENST00000540804 RSPH6AQ9H0K4 717 aa19.46■□□□□ 0.71
MSRB3-209ENST00000540804 SOS1Q07889 1333 aaPredicted RBP19.46■□□□□ 0.71
MSRB3-209ENST00000540804 GNAT3A8MTJ3 354 aa19.45■□□□□ 0.7
MSRB3-209ENST00000540804 GAS2L2Q8NHY3 880 aa19.45■□□□□ 0.7
MSRB3-209ENST00000540804 ATP10DQ9P241 1426 aa19.44■□□□□ 0.7
MSRB3-209ENST00000540804 C1QTNF8P60827 252 aa19.44■□□□□ 0.7
MSRB3-209ENST00000540804 ZNF526Q8TF50 670 aaPredicted RBP19.44■□□□□ 0.7
MSRB3-209ENST00000540804 CFAP53Q96M91 514 aa19.44■□□□□ 0.7
MSRB3-209ENST00000540804 KIAA1551Q9HCM1 1747 aa19.44■□□□□ 0.7
MSRB3-209ENST00000540804 CANXP27824 592 aaKnown RBP19.43■□□□□ 0.7
MSRB3-209ENST00000540804 TGFB2P61812 414 aa19.43■□□□□ 0.7
MSRB3-209ENST00000540804 TEFQ10587 303 aa19.43■□□□□ 0.7
MSRB3-209ENST00000540804 BCS1LQ9Y276 419 aa19.43■□□□□ 0.7
MSRB3-209ENST00000540804 KCNQ3O43525 872 aa19.42■□□□□ 0.7
MSRB3-209ENST00000540804 GIGYF1O75420 1035 aaPredicted RBP19.42■□□□□ 0.7
MSRB3-209ENST00000540804 U2AF1L5P0DN76 240 aaPredicted RBP19.42■□□□□ 0.7
MSRB3-209ENST00000540804 TM4SF1P30408 202 aa19.42■□□□□ 0.7
MSRB3-209ENST00000540804 U2AF1Q01081 240 aaKnown RBP eCLIP19.42■□□□□ 0.7
MSRB3-209ENST00000540804 TTC5Q8N0Z6 440 aa19.42■□□□□ 0.7
MSRB3-209ENST00000540804 ZNF496Q96IT1 587 aaPredicted RBP19.42■□□□□ 0.7
MSRB3-209ENST00000540804 N4BP2Q86UW6 1770 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms