RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 PIM2Q9P1W9 311 aa14.85□□□□□ -0.03
SSPN-207ENST00000540266 LTN1O94822 1766 aa14.85□□□□□ -0.03
SSPN-207ENST00000540266 SLC12A5Q9H2X9 1139 aa14.84□□□□□ -0.03
SSPN-207ENST00000540266 CCDC87Q9NVE4 849 aa14.84□□□□□ -0.03
SSPN-207ENST00000540266 TAF1LQ8IZX4 1826 aa14.84□□□□□ -0.03
SSPN-207ENST00000540266 KIF13BQ9NQT8 1826 aa14.84□□□□□ -0.03
SSPN-207ENST00000540266 PCDH11XQ9BZA7 1347 aa14.84□□□□□ -0.03
SSPN-207ENST00000540266 PCDH11YQ9BZA8 1340 aa14.84□□□□□ -0.03
SSPN-207ENST00000540266 UBR3Q6ZT12 1888 aa14.84□□□□□ -0.03
SSPN-207ENST00000540266 EDC4Q6P2E9 1401 aaKnown RBP14.83□□□□□ -0.03
SSPN-207ENST00000540266 NKX1-1Q15270 411 aaPredicted RBP14.83□□□□□ -0.04
SSPN-207ENST00000540266 DALRD3Q5D0E6 543 aaKnown RBP14.83□□□□□ -0.04
SSPN-207ENST00000540266 RAPGEF4Q8WZA2 1011 aa14.83□□□□□ -0.04
SSPN-207ENST00000540266 ZC3H4Q9UPT8 1303 aaKnown RBP14.83□□□□□ -0.04
SSPN-207ENST00000540266 GLTPD2A6NH11 291 aa14.82□□□□□ -0.04
SSPN-207ENST00000540266 AMPHP49418 695 aa14.82□□□□□ -0.04
SSPN-207ENST00000540266 USHBP1Q8N6Y0 703 aa14.82□□□□□ -0.04
SSPN-207ENST00000540266 MON2Q7Z3U7 1717 aa14.82□□□□□ -0.04
SSPN-207ENST00000540266 POTECB2RU33 542 aa14.81□□□□□ -0.04
SSPN-207ENST00000540266 GYS1P13807 737 aa14.81□□□□□ -0.04
SSPN-207ENST00000540266 TATP17735 454 aaPredicted RBP14.81□□□□□ -0.04
SSPN-207ENST00000540266 TRAPPC3LQ5T215 181 aa14.81□□□□□ -0.04
SSPN-207ENST00000540266 HDGFL2Q7Z4V5 671 aaPredicted RBP14.81□□□□□ -0.04
SSPN-207ENST00000540266 CREBZFQ9NS37 354 aa14.81□□□□□ -0.04
SSPN-207ENST00000540266 KDM6AO15550 1401 aaPredicted RBP14.81□□□□□ -0.04
SSPN-207ENST00000540266 RGS19P49795 217 aa14.8□□□□□ -0.04
SSPN-207ENST00000540266 ARHGEF1Q92888 912 aaKnown RBP14.8□□□□□ -0.04
SSPN-207ENST00000540266 ASAP1Q9ULH1 1129 aa14.8□□□□□ -0.04
SSPN-207ENST00000540266 N4BP2Q86UW6 1770 aaPredicted RBP14.8□□□□□ -0.04
SSPN-207ENST00000540266 ATP6V1AP38606 617 aa14.79□□□□□ -0.04
SSPN-207ENST00000540266 CTCFP49711 727 aaPredicted RBP14.79□□□□□ -0.04
SSPN-207ENST00000540266 ABHD8Q96I13 439 aa14.79□□□□□ -0.04
SSPN-207ENST00000540266 MKRN1Q9UHC7 482 aaKnown RBP14.79□□□□□ -0.04
SSPN-207ENST00000540266 A0A1W2PP64 1363 aa14.78□□□□□ -0.04
SSPN-207ENST00000540266 TMC1Q8TDI8 760 aa14.78□□□□□ -0.04
SSPN-207ENST00000540266 TERF2IPQ9NYB0 399 aa14.78□□□□□ -0.04
SSPN-207ENST00000540266 RTCBQ9Y3I0 505 aaKnown RBP14.78□□□□□ -0.04
SSPN-207ENST00000540266 PARP3Q9Y6F1 533 aa14.78□□□□□ -0.04
SSPN-207ENST00000540266 TNRC6CQ9HCJ0 1690 aaKnown RBP14.77□□□□□ -0.04
SSPN-207ENST00000540266 RTL1A6NKG5 1358 aa14.76□□□□□ -0.05
SSPN-207ENST00000540266 MAP2P11137 1827 aaKnown RBP14.76□□□□□ -0.05
SSPN-207ENST00000540266 LMNB1P20700 586 aa14.76□□□□□ -0.05
SSPN-207ENST00000540266 RC3H1Q5TC82 1133 aaKnown RBP14.76□□□□□ -0.05
SSPN-207ENST00000540266 COG3Q96JB2 828 aa14.76□□□□□ -0.05
SSPN-207ENST00000540266 SLC4A9Q96Q91 983 aa14.76□□□□□ -0.05
SSPN-207ENST00000540266 ATG3Q9NT62 314 aa14.76□□□□□ -0.05
SSPN-207ENST00000540266 WBP1LQ9NX94 342 aa14.76□□□□□ -0.05
SSPN-207ENST00000540266 PKD1L3Q7Z443 1732 aa14.75□□□□□ -0.05
SSPN-207ENST00000540266 CNTNAP1P78357 1384 aa14.75□□□□□ -0.05
SSPN-207ENST00000540266 CHRNA5P30532 468 aa14.75□□□□□ -0.05
SSPN-207ENST00000540266 MLLT1Q03111 559 aaPredicted RBP14.75□□□□□ -0.05
SSPN-207ENST00000540266 L3MBTL2Q969R5 705 aa14.75□□□□□ -0.05
SSPN-207ENST00000540266 BRCA1P38398 1863 aaKnown RBP14.75□□□□□ -0.05
SSPN-207ENST00000540266 LBX1P52954 281 aa14.74□□□□□ -0.05
SSPN-207ENST00000540266 RASSF7Q02833 373 aa14.74□□□□□ -0.05
SSPN-207ENST00000540266 RRS1Q15050 365 aaKnown RBP14.74□□□□□ -0.05
SSPN-207ENST00000540266 RPS6KA4O75676 772 aa14.73□□□□□ -0.05
SSPN-207ENST00000540266 RFC4P35249 363 aa14.73□□□□□ -0.05
SSPN-207ENST00000540266 DDR1Q08345 913 aa14.73□□□□□ -0.05
SSPN-207ENST00000540266 HSP90AB2PQ58FF8 381 aa14.73□□□□□ -0.05
SSPN-207ENST00000540266 PUS7Q96PZ0 661 aaKnown RBP14.73□□□□□ -0.05
SSPN-207ENST00000540266 TMOD3Q9NYL9 352 aa14.73□□□□□ -0.05
SSPN-207ENST00000540266 C4AP0C0L4 1744 aa14.72□□□□□ -0.05
SSPN-207ENST00000540266 ARFGEF1Q9Y6D6 1849 aa14.72□□□□□ -0.05
SSPN-207ENST00000540266 VEGFBP49765 207 aa14.72□□□□□ -0.05
SSPN-207ENST00000540266 ROCK2O75116 1388 aaKnown RBP14.72□□□□□ -0.05
SSPN-207ENST00000540266 KDRP35968 1356 aa14.72□□□□□ -0.05
SSPN-207ENST00000540266 RGPD2P0DJD1 1756 aa14.71□□□□□ -0.05
SSPN-207ENST00000540266 CHADLQ6NUI6 762 aa14.71□□□□□ -0.05
SSPN-207ENST00000540266 AIDAQ96BJ3 306 aa14.71□□□□□ -0.05
SSPN-207ENST00000540266 INSRP06213 1382 aa14.71□□□□□ -0.06
SSPN-207ENST00000540266 CNTNAP4Q9C0A0 1308 aa14.7□□□□□ -0.06
SSPN-207ENST00000540266 PASKQ96RG2 1323 aa14.69□□□□□ -0.06
SSPN-207ENST00000540266 HSPA8P11142 646 aaKnown RBP14.69□□□□□ -0.06
SSPN-207ENST00000540266 TM4SF1P30408 202 aa14.69□□□□□ -0.06
SSPN-207ENST00000540266 SMG6Q86US8 1419 aaKnown RBP14.68□□□□□ -0.06
SSPN-207ENST00000540266 POTEIP0CG38 1075 aa14.68□□□□□ -0.06
SSPN-207ENST00000540266 POTEJP0CG39 1038 aa14.68□□□□□ -0.06
SSPN-207ENST00000540266 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.68□□□□□ -0.06
SSPN-207ENST00000540266 SPG7Q9UQ90 795 aa14.68□□□□□ -0.06
SSPN-207ENST00000540266 NFKBIEO00221 500 aa14.67□□□□□ -0.06
SSPN-207ENST00000540266 POLRMTO00411 1230 aaKnown RBP14.67□□□□□ -0.06
SSPN-207ENST00000540266 DPY19L2Q6NUT2 758 aa14.67□□□□□ -0.06
SSPN-207ENST00000540266 SRP68Q9UHB9 627 aaKnown RBP14.67□□□□□ -0.06
SSPN-207ENST00000540266 SBF1O95248 1867 aa14.67□□□□□ -0.06
SSPN-207ENST00000540266 NCAPD2Q15021 1401 aa14.66□□□□□ -0.06
SSPN-207ENST00000540266 ITGB4P16144 1822 aa14.66□□□□□ -0.06
SSPN-207ENST00000540266 FYB1O15117 783 aa14.66□□□□□ -0.06
SSPN-207ENST00000540266 PLCB2Q00722 1185 aa14.66□□□□□ -0.06
SSPN-207ENST00000540266 USP42Q9H9J4 1324 aaKnown RBP14.66□□□□□ -0.06
SSPN-207ENST00000540266 CCDC85CA6NKD9 419 aa14.65□□□□□ -0.06
SSPN-207ENST00000540266 ITGBL1O95965 494 aaPredicted RBP14.65□□□□□ -0.06
SSPN-207ENST00000540266 PRKCSHP14314 528 aaPredicted RBP14.65□□□□□ -0.06
SSPN-207ENST00000540266 PHKG2P15735 406 aa14.65□□□□□ -0.06
SSPN-207ENST00000540266 KIF24Q5T7B8 1368 aa14.64□□□□□ -0.07
SSPN-207ENST00000540266 FLT4P35916 1363 aa14.63□□□□□ -0.07
SSPN-207ENST00000540266 TONSLQ96HA7 1378 aa14.63□□□□□ -0.07
SSPN-207ENST00000540266 TMEM88BA6NKF7 163 aa14.63□□□□□ -0.07
SSPN-207ENST00000540266 IFNL2Q8IZJ0 200 aa14.63□□□□□ -0.07
SSPN-207ENST00000540266 TTLL6Q8N841 843 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms