RNA–Protein interactions for RNA: ENST00000540114.5

PPFIBP1-210, Transcript of PPFIA binding protein 1, humanhuman

TSL 2

Gene PPFIBP1, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-210ENST00000540114 RAPGEF4Q8WZA2 1011 aa18.61■□□□□ 0.57
PPFIBP1-210ENST00000540114 CEMIPQ8WUJ3 1361 aa18.61■□□□□ 0.57
PPFIBP1-210ENST00000540114 INTS3Q68E01 1043 aaKnown RBP18.6■□□□□ 0.57
PPFIBP1-210ENST00000540114 ANO8Q9HCE9 1232 aaPredicted RBP18.6■□□□□ 0.57
PPFIBP1-210ENST00000540114 BABAM1Q9NWV8 329 aa18.6■□□□□ 0.57
PPFIBP1-210ENST00000540114 PXDNQ92626 1479 aa18.6■□□□□ 0.57
PPFIBP1-210ENST00000540114 BTBD11A6QL63 1104 aa18.6■□□□□ 0.57
PPFIBP1-210ENST00000540114 EIF2S2P20042 333 aaKnown RBP18.6■□□□□ 0.57
PPFIBP1-210ENST00000540114 SMC5Q8IY18 1101 aa18.6■□□□□ 0.57
PPFIBP1-210ENST00000540114 KCNQ3O43525 872 aa18.59■□□□□ 0.57
PPFIBP1-210ENST00000540114 LRRC37A3O60309 1634 aa18.59■□□□□ 0.57
PPFIBP1-210ENST00000540114 RNMTO43148 476 aaKnown RBP18.59■□□□□ 0.57
PPFIBP1-210ENST00000540114 RGS12O14924 1447 aa18.58■□□□□ 0.56
PPFIBP1-210ENST00000540114 FKBP5Q13451 457 aaPredicted RBP18.58■□□□□ 0.56
PPFIBP1-210ENST00000540114 HDGFL1Q5TGJ6 251 aa18.58■□□□□ 0.56
PPFIBP1-210ENST00000540114 SIRT2Q8IXJ6 389 aa18.57■□□□□ 0.56
PPFIBP1-210ENST00000540114 LNPKQ9C0E8 428 aa18.57■□□□□ 0.56
PPFIBP1-210ENST00000540114 TATP17735 454 aaPredicted RBP18.56■□□□□ 0.56
PPFIBP1-210ENST00000540114 EIF4A1P60842 406 aaKnown RBP18.56■□□□□ 0.56
PPFIBP1-210ENST00000540114 FLIIQ13045 1269 aa18.56■□□□□ 0.56
PPFIBP1-210ENST00000540114 ANKRD45Q5TZF3 282 aa18.56■□□□□ 0.56
PPFIBP1-210ENST00000540114 MEIS3Q99687 375 aa18.55■□□□□ 0.56
PPFIBP1-210ENST00000540114 PRDM11Q9NQV5 511 aa18.55■□□□□ 0.56
PPFIBP1-210ENST00000540114 NCAPD2Q15021 1401 aa18.55■□□□□ 0.56
PPFIBP1-210ENST00000540114 NUCB1Q02818 461 aa18.53■□□□□ 0.56
PPFIBP1-210ENST00000540114 BECN1Q14457 450 aa18.53■□□□□ 0.56
PPFIBP1-210ENST00000540114 SOS2Q07890 1332 aaPredicted RBP18.53■□□□□ 0.56
PPFIBP1-210ENST00000540114 CHD1LQ86WJ1 897 aa18.53■□□□□ 0.56
PPFIBP1-210ENST00000540114 GCC1Q96CN9 775 aa18.53■□□□□ 0.56
PPFIBP1-210ENST00000540114 SLKQ9H2G2 1235 aaPredicted RBP18.53■□□□□ 0.56
PPFIBP1-210ENST00000540114 PHAXQ9H814 394 aaKnown RBP18.53■□□□□ 0.56
PPFIBP1-210ENST00000540114 CCT4P50991 539 aaKnown RBP18.52■□□□□ 0.56
PPFIBP1-210ENST00000540114 SPG7Q9UQ90 795 aa18.52■□□□□ 0.56
PPFIBP1-210ENST00000540114 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.55
PPFIBP1-210ENST00000540114 LMO7Q8WWI1 1683 aa18.51■□□□□ 0.55
PPFIBP1-210ENST00000540114 ANXA1P04083 346 aa18.5■□□□□ 0.55
PPFIBP1-210ENST00000540114 CHPF2Q9P2E5 772 aa18.5■□□□□ 0.55
PPFIBP1-210ENST00000540114 TOM1L2Q6ZVM7 507 aa18.5■□□□□ 0.55
PPFIBP1-210ENST00000540114 CPDO75976 1380 aa18.49■□□□□ 0.55
PPFIBP1-210ENST00000540114 COL18A1P39060 1754 aa18.49■□□□□ 0.55
PPFIBP1-210ENST00000540114 UPF2Q9HAU5 1272 aaKnown RBP18.49■□□□□ 0.55
PPFIBP1-210ENST00000540114 PHKG2P15735 406 aa18.49■□□□□ 0.55
PPFIBP1-210ENST00000540114 CAMTA1Q9Y6Y1 1673 aa18.49■□□□□ 0.55
PPFIBP1-210ENST00000540114 MEGF6O75095 1541 aa18.49■□□□□ 0.55
PPFIBP1-210ENST00000540114 SLC39A6Q13433 755 aa18.48■□□□□ 0.55
PPFIBP1-210ENST00000540114 CEP85Q6P2H3 762 aa18.48■□□□□ 0.55
PPFIBP1-210ENST00000540114 RPAP2Q8IXW5 612 aaPredicted RBP18.48■□□□□ 0.55
PPFIBP1-210ENST00000540114 IFNL2Q8IZJ0 200 aa18.48■□□□□ 0.55
PPFIBP1-210ENST00000540114 ANKRD44Q8N8A2 993 aa18.48■□□□□ 0.55
PPFIBP1-210ENST00000540114 NFATC2IPQ8NCF5 419 aa18.48■□□□□ 0.55
PPFIBP1-210ENST00000540114 STRN4Q9NRL3 753 aa18.48■□□□□ 0.55
PPFIBP1-210ENST00000540114 PRAMEF22A3QJZ6 481 aa18.47■□□□□ 0.55
PPFIBP1-210ENST00000540114 APBB1O00213 710 aa18.47■□□□□ 0.55
PPFIBP1-210ENST00000540114 HOXB7P09629 217 aa18.46■□□□□ 0.55
PPFIBP1-210ENST00000540114 GIGYF1O75420 1035 aaPredicted RBP18.46■□□□□ 0.55
PPFIBP1-210ENST00000540114 FAM208AQ9UK61 1670 aaKnown RBP18.46■□□□□ 0.55
PPFIBP1-210ENST00000540114 CYP27B1O15528 508 aa18.45■□□□□ 0.54
PPFIBP1-210ENST00000540114 DCTPP1Q9H773 170 aa18.45■□□□□ 0.54
PPFIBP1-210ENST00000540114 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.548e-7■■■■■ 29
PPFIBP1-210ENST00000540114 EVA1CP58658 441 aa18.45■□□□□ 0.54
PPFIBP1-210ENST00000540114 TBC1D32Q96NH3 1257 aa18.45■□□□□ 0.54
PPFIBP1-210ENST00000540114 CHMP4AQ9BY43 222 aa18.45■□□□□ 0.54
PPFIBP1-210ENST00000540114 SLC52A2Q9HAB3 445 aa18.45■□□□□ 0.54
PPFIBP1-210ENST00000540114 GNAI2P04899 355 aa18.44■□□□□ 0.54
PPFIBP1-210ENST00000540114 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.44■□□□□ 0.54
PPFIBP1-210ENST00000540114 CRYBG1Q9Y4K1 1723 aa18.44■□□□□ 0.54
PPFIBP1-210ENST00000540114 ATP10DQ9P241 1426 aa18.44■□□□□ 0.54
PPFIBP1-210ENST00000540114 KDM3BQ7LBC6 1761 aa18.44■□□□□ 0.54
PPFIBP1-210ENST00000540114 WDR17Q8IZU2 1322 aa18.44■□□□□ 0.54
PPFIBP1-210ENST00000540114 ZNF790Q6PG37 636 aa18.43■□□□□ 0.54
PPFIBP1-210ENST00000540114 PI4KAP2A4QPH2 592 aa18.43■□□□□ 0.54
PPFIBP1-210ENST00000540114 PI4KAP1Q8N8J0 262 aa18.43■□□□□ 0.54
PPFIBP1-210ENST00000540114 DBF4Q9UBU7 674 aaPredicted RBP18.43■□□□□ 0.54
PPFIBP1-210ENST00000540114 OVOS2A0A0G2JMS6 1433 aa18.43■□□□□ 0.54
PPFIBP1-210ENST00000540114 KDM6AO15550 1401 aaPredicted RBP18.43■□□□□ 0.54
PPFIBP1-210ENST00000540114 GNAI3P08754 354 aa18.42■□□□□ 0.54
PPFIBP1-210ENST00000540114 TBC1D2Q9BYX2 928 aa18.42■□□□□ 0.54
PPFIBP1-210ENST00000540114 PROSER3Q2NL68 480 aa18.41■□□□□ 0.54
PPFIBP1-210ENST00000540114 DCAF5Q96JK2 942 aa18.41■□□□□ 0.54
PPFIBP1-210ENST00000540114 CACNA1FO60840 1977 aa18.41■□□□□ 0.54
PPFIBP1-210ENST00000540114 HMMRO75330 724 aa18.41■□□□□ 0.54
PPFIBP1-210ENST00000540114 ANTXR1Q9H6X2 564 aa18.41■□□□□ 0.54
PPFIBP1-210ENST00000540114 LARP1Q6PKG0 1096 aaKnown RBP18.4■□□□□ 0.54
PPFIBP1-210ENST00000540114 C16orf71Q8IYS4 520 aaPredicted RBP18.4■□□□□ 0.54
PPFIBP1-210ENST00000540114 SPRYD3Q8NCJ5 442 aa18.4■□□□□ 0.54
PPFIBP1-210ENST00000540114 SRCIN1Q9C0H9 1055 aa18.4■□□□□ 0.54
PPFIBP1-210ENST00000540114 SMARCA5O60264 1052 aaPredicted RBP18.4■□□□□ 0.54
PPFIBP1-210ENST00000540114 CABP4P57796 275 aa18.4■□□□□ 0.54
PPFIBP1-210ENST00000540114 USP44Q9H0E7 712 aa18.4■□□□□ 0.54
PPFIBP1-210ENST00000540114 ZCRB1Q8TBF4 217 aaKnown RBP18.39■□□□□ 0.54
PPFIBP1-210ENST00000540114 DNAAF4Q8WXU2 420 aa18.39■□□□□ 0.54
PPFIBP1-210ENST00000540114 LRRFIP2Q9Y608 721 aaKnown RBP18.39■□□□□ 0.54
PPFIBP1-210ENST00000540114 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.53
PPFIBP1-210ENST00000540114 AIMP1Q12904 312 aaKnown RBP18.39■□□□□ 0.53
PPFIBP1-210ENST00000540114 TTC5Q8N0Z6 440 aa18.39■□□□□ 0.53
PPFIBP1-210ENST00000540114 ABCC6O95255 1503 aa18.39■□□□□ 0.53
PPFIBP1-210ENST00000540114 HSP90AB1P08238 724 aaKnown RBP18.38■□□□□ 0.53
PPFIBP1-210ENST00000540114 MFAP1P55081 439 aaKnown RBP18.38■□□□□ 0.53
PPFIBP1-210ENST00000540114 DDX54Q8TDD1 881 aaKnown RBP18.38■□□□□ 0.53
PPFIBP1-210ENST00000540114 COL5A2P05997 1499 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms