RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 NKX1-1Q15270 411 aaPredicted RBP20.43■□□□□ 0.86
CCDC144NL-202ENST00000539177 C4AP0C0L4 1744 aa20.43■□□□□ 0.86
CCDC144NL-202ENST00000539177 BCS1LQ9Y276 419 aa20.42■□□□□ 0.86
CCDC144NL-202ENST00000539177 ARFGEF1Q9Y6D6 1849 aa20.41■□□□□ 0.86
CCDC144NL-202ENST00000539177 APLP1P51693 650 aa20.4■□□□□ 0.86
CCDC144NL-202ENST00000539177 C10orf71Q711Q0 1435 aa20.39■□□□□ 0.85
CCDC144NL-202ENST00000539177 A0A0G2JLW4 131 aa20.39■□□□□ 0.85
CCDC144NL-202ENST00000539177 ARHGAP27Q6ZUM4 889 aa20.38■□□□□ 0.85
CCDC144NL-202ENST00000539177 EYA1Q99502 592 aa20.38■□□□□ 0.85
CCDC144NL-202ENST00000539177 CARD14Q9BXL6 1004 aa20.38■□□□□ 0.85
CCDC144NL-202ENST00000539177 NMRK2Q9NPI5 230 aa20.38■□□□□ 0.85
CCDC144NL-202ENST00000539177 ATG3Q9NT62 314 aa20.38■□□□□ 0.85
CCDC144NL-202ENST00000539177 ZNF831Q5JPB2 1677 aa20.38■□□□□ 0.85
CCDC144NL-202ENST00000539177 MYH14Q7Z406 1995 aaKnown RBP20.37■□□□□ 0.85
CCDC144NL-202ENST00000539177 TOMM70O94826 608 aa20.37■□□□□ 0.85
CCDC144NL-202ENST00000539177 PHKG2P15735 406 aa20.37■□□□□ 0.85
CCDC144NL-202ENST00000539177 KDRP35968 1356 aa20.36■□□□□ 0.85
CCDC144NL-202ENST00000539177 IFNL2Q8IZJ0 200 aa20.36■□□□□ 0.85
CCDC144NL-202ENST00000539177 RTCBQ9Y3I0 505 aaKnown RBP20.36■□□□□ 0.85
CCDC144NL-202ENST00000539177 TGFB2P61812 414 aa20.35■□□□□ 0.85
CCDC144NL-202ENST00000539177 TRAPPC3LQ5T215 181 aa20.35■□□□□ 0.85
CCDC144NL-202ENST00000539177 RBM42Q9BTD8 480 aaKnown RBP20.35■□□□□ 0.85
CCDC144NL-202ENST00000539177 WASHC2AQ641Q2 1341 aa20.34■□□□□ 0.85
CCDC144NL-202ENST00000539177 FCHSD2O94868 740 aa20.34■□□□□ 0.85
CCDC144NL-202ENST00000539177 DPEP1P16444 411 aa20.34■□□□□ 0.85
CCDC144NL-202ENST00000539177 DNAJC5GQ8N7S2 189 aa20.33■□□□□ 0.85
CCDC144NL-202ENST00000539177 SLC4A9Q96Q91 983 aa20.33■□□□□ 0.85
CCDC144NL-202ENST00000539177 CCDC87Q9NVE4 849 aa20.33■□□□□ 0.85
CCDC144NL-202ENST00000539177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.33■□□□□ 0.85
CCDC144NL-202ENST00000539177 SBF1O95248 1867 aa20.33■□□□□ 0.84
CCDC144NL-202ENST00000539177 HTRA3P83110 453 aa20.32■□□□□ 0.84
CCDC144NL-202ENST00000539177 CDCA8Q53HL2 280 aa20.32■□□□□ 0.84
CCDC144NL-202ENST00000539177 NLGN1Q8N2Q7 840 aa20.32■□□□□ 0.84
CCDC144NL-202ENST00000539177 ARHGEF1Q92888 912 aaKnown RBP20.32■□□□□ 0.84
CCDC144NL-202ENST00000539177 TNRC6CQ9HCJ0 1690 aaKnown RBP20.3■□□□□ 0.84
CCDC144NL-202ENST00000539177 GYS1P13807 737 aa20.3■□□□□ 0.84
CCDC144NL-202ENST00000539177 RFC4P35249 363 aa20.3■□□□□ 0.84
CCDC144NL-202ENST00000539177 PARP3Q9Y6F1 533 aa20.3■□□□□ 0.84
CCDC144NL-202ENST00000539177 KCPQ6ZWJ8 1503 aa20.3■□□□□ 0.84
CCDC144NL-202ENST00000539177 C9orf131Q5VYM1 1079 aa20.29■□□□□ 0.84
CCDC144NL-202ENST00000539177 POLKQ9UBT6 870 aa20.29■□□□□ 0.84
CCDC144NL-202ENST00000539177 TJP1Q07157 1748 aa20.29■□□□□ 0.84
CCDC144NL-202ENST00000539177 TNNT2P45379 298 aaPredicted RBP20.28■□□□□ 0.84
CCDC144NL-202ENST00000539177 EIF4A2Q14240 407 aaKnown RBP20.28■□□□□ 0.84
CCDC144NL-202ENST00000539177 C16orf71Q8IYS4 520 aaPredicted RBP20.28■□□□□ 0.84
CCDC144NL-202ENST00000539177 CNTNAP4Q9C0A0 1308 aa20.27■□□□□ 0.84
CCDC144NL-202ENST00000539177 PLEKHG2Q9H7P9 1386 aa20.27■□□□□ 0.84
CCDC144NL-202ENST00000539177 ADRA2BP18089 450 aa20.27■□□□□ 0.84
CCDC144NL-202ENST00000539177 RBM46Q8TBY0 533 aaKnown RBP20.27■□□□□ 0.84
CCDC144NL-202ENST00000539177 KDM6AO15550 1401 aaPredicted RBP20.27■□□□□ 0.83
CCDC144NL-202ENST00000539177 RPS6KA4O75676 772 aa20.26■□□□□ 0.83
CCDC144NL-202ENST00000539177 CCDC88AQ3V6T2 1871 aa20.25■□□□□ 0.83
CCDC144NL-202ENST00000539177 KCNA3P22001 575 aa20.25■□□□□ 0.83
CCDC144NL-202ENST00000539177 RC3H1Q5TC82 1133 aaKnown RBP20.25■□□□□ 0.83
CCDC144NL-202ENST00000539177 SRP68Q9UHB9 627 aaKnown RBP20.25■□□□□ 0.83
CCDC144NL-202ENST00000539177 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
CCDC144NL-202ENST00000539177 ERVV-2B6SEH9 535 aa20.24■□□□□ 0.83
CCDC144NL-202ENST00000539177 RNF181Q9P0P0 153 aa20.24■□□□□ 0.83
CCDC144NL-202ENST00000539177 AFDNP55196 1824 aaKnown RBP20.23■□□□□ 0.83
CCDC144NL-202ENST00000539177 KLRG1Q96E93 195 aa20.23■□□□□ 0.83
CCDC144NL-202ENST00000539177 POLR3GLQ9BT43 218 aa20.23■□□□□ 0.83
CCDC144NL-202ENST00000539177 PIM2Q9P1W9 311 aa20.23■□□□□ 0.83
CCDC144NL-202ENST00000539177 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
CCDC144NL-202ENST00000539177 ADAMTS7Q9UKP4 1686 aa20.22■□□□□ 0.83
CCDC144NL-202ENST00000539177 PTCD1O75127 700 aaKnown RBP20.22■□□□□ 0.83
CCDC144NL-202ENST00000539177 CABP4P57796 275 aa20.22■□□□□ 0.83
CCDC144NL-202ENST00000539177 COL13A1Q5TAT6 717 aaPredicted RBP20.22■□□□□ 0.83
CCDC144NL-202ENST00000539177 ZNF530Q6P9A1 599 aaPredicted RBP20.22■□□□□ 0.83
CCDC144NL-202ENST00000539177 DCAF5Q96JK2 942 aa20.22■□□□□ 0.83
CCDC144NL-202ENST00000539177 CAPN15O75808 1086 aa20.21■□□□□ 0.83
CCDC144NL-202ENST00000539177 HSP90AB1P08238 724 aaKnown RBP20.21■□□□□ 0.83
CCDC144NL-202ENST00000539177 CHRNA5P30532 468 aa20.21■□□□□ 0.83
CCDC144NL-202ENST00000539177 DDR1Q08345 913 aa20.21■□□□□ 0.83
CCDC144NL-202ENST00000539177 FKBP8Q14318 412 aa20.21■□□□□ 0.83
CCDC144NL-202ENST00000539177 DALRD3Q5D0E6 543 aaKnown RBP20.21■□□□□ 0.83
CCDC144NL-202ENST00000539177 RRAGCQ9HB90 399 aa20.21■□□□□ 0.83
CCDC144NL-202ENST00000539177 TIAM2Q8IVF5 1701 aa20.21■□□□□ 0.83
CCDC144NL-202ENST00000539177 KDM2BQ8NHM5 1336 aa20.21■□□□□ 0.83
CCDC144NL-202ENST00000539177 CRKLP46109 303 aaKnown RBP20.2■□□□□ 0.82
CCDC144NL-202ENST00000539177 DLEC1Q9Y238 1755 aa20.2■□□□□ 0.82
CCDC144NL-202ENST00000539177 USP42Q9H9J4 1324 aaKnown RBP20.2■□□□□ 0.82
CCDC144NL-202ENST00000539177 FSTL1Q12841 308 aa20.19■□□□□ 0.82
CCDC144NL-202ENST00000539177 PLEKHO1Q53GL0 409 aaPredicted RBP20.19■□□□□ 0.82
CCDC144NL-202ENST00000539177 JMYQ8N9B5 988 aa20.18■□□□□ 0.82
CCDC144NL-202ENST00000539177 MTHFSP49914 203 aa20.16■□□□□ 0.82
CCDC144NL-202ENST00000539177 RASSF7Q02833 373 aa20.16■□□□□ 0.82
CCDC144NL-202ENST00000539177 AEBP1Q8IUX7 1158 aa20.16■□□□□ 0.82
CCDC144NL-202ENST00000539177 C1orf141Q5JVX7 400 aa20.15■□□□□ 0.82
CCDC144NL-202ENST00000539177 NFATC2IPQ8NCF5 419 aa20.15■□□□□ 0.82
CCDC144NL-202ENST00000539177 NRXN2Q9P2S2 1712 aa20.14■□□□□ 0.81
CCDC144NL-202ENST00000539177 POLRMTO00411 1230 aaKnown RBP20.14■□□□□ 0.81
CCDC144NL-202ENST00000539177 AMOTQ4VCS5 1084 aa20.13■□□□□ 0.81
CCDC144NL-202ENST00000539177 USPL1Q5W0Q7 1092 aa20.13■□□□□ 0.81
CCDC144NL-202ENST00000539177 SMC1BQ8NDV3 1235 aa20.13■□□□□ 0.81
CCDC144NL-202ENST00000539177 TNS4Q8IZW8 715 aa20.12■□□□□ 0.81
CCDC144NL-202ENST00000539177 INTS5Q6P9B9 1019 aaKnown RBP20.11■□□□□ 0.81
CCDC144NL-202ENST00000539177 CACNA1SQ13698 1873 aa20.1■□□□□ 0.81
CCDC144NL-202ENST00000539177 ZPR1O75312 459 aa20.1■□□□□ 0.81
CCDC144NL-202ENST00000539177 TM4SF1P30408 202 aa20.1■□□□□ 0.81
CCDC144NL-202ENST00000539177 DNAJC10Q8IXB1 793 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms