RNA–Protein interactions for RNA: ENST00000538957.1

SCNN1A-211, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 566 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-211ENST00000538957 NLGN1Q8N2Q7 840 aa17.13■□□□□ 0.33
SCNN1A-211ENST00000538957 SMC1BQ8NDV3 1235 aa17.13■□□□□ 0.33
SCNN1A-211ENST00000538957 PIGBQ92521 554 aa17.13■□□□□ 0.33
SCNN1A-211ENST00000538957 TMOD3Q9NYL9 352 aa17.13■□□□□ 0.33
SCNN1A-211ENST00000538957 PUS7Q96PZ0 661 aaKnown RBP17.12■□□□□ 0.33
SCNN1A-211ENST00000538957 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
SCNN1A-211ENST00000538957 RNF181Q9P0P0 153 aa17.12■□□□□ 0.33
SCNN1A-211ENST00000538957 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
SCNN1A-211ENST00000538957 KIF13BQ9NQT8 1826 aa17.12■□□□□ 0.33
SCNN1A-211ENST00000538957 CYP27B1O15528 508 aa17.11■□□□□ 0.33
SCNN1A-211ENST00000538957 DPEP1P16444 411 aa17.11■□□□□ 0.33
SCNN1A-211ENST00000538957 TRAPPC3LQ5T215 181 aa17.11■□□□□ 0.33
SCNN1A-211ENST00000538957 RRAGCQ9HB90 399 aa17.11■□□□□ 0.33
SCNN1A-211ENST00000538957 SPG7Q9UQ90 795 aa17.11■□□□□ 0.33
SCNN1A-211ENST00000538957 RTCBQ9Y3I0 505 aaKnown RBP17.11■□□□□ 0.33
SCNN1A-211ENST00000538957 KCPQ6ZWJ8 1503 aa17.11■□□□□ 0.33
SCNN1A-211ENST00000538957 C10orf71Q711Q0 1435 aa17.1■□□□□ 0.33
SCNN1A-211ENST00000538957 HSPA1AP0DMV8 641 aaKnown RBP17.09■□□□□ 0.33
SCNN1A-211ENST00000538957 HSPA1BP0DMV9 641 aaKnown RBP17.09■□□□□ 0.33
SCNN1A-211ENST00000538957 TONSLQ96HA7 1378 aa17.09■□□□□ 0.33
SCNN1A-211ENST00000538957 PKD1L3Q7Z443 1732 aa17.09■□□□□ 0.33
SCNN1A-211ENST00000538957 TNRC6CQ9HCJ0 1690 aaKnown RBP17.08■□□□□ 0.32
SCNN1A-211ENST00000538957 FLT4P35916 1363 aa17.08■□□□□ 0.32
SCNN1A-211ENST00000538957 PIM2Q9P1W9 311 aa17.08■□□□□ 0.32
SCNN1A-211ENST00000538957 INSRP06213 1382 aa17.07■□□□□ 0.32
SCNN1A-211ENST00000538957 RFC4P35249 363 aa17.07■□□□□ 0.32
SCNN1A-211ENST00000538957 DALRD3Q5D0E6 543 aaKnown RBP17.07■□□□□ 0.32
SCNN1A-211ENST00000538957 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
SCNN1A-211ENST00000538957 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
SCNN1A-211ENST00000538957 ARFGEF1Q9Y6D6 1849 aa17.06■□□□□ 0.32
SCNN1A-211ENST00000538957 ITPK1Q13572 414 aa17.06■□□□□ 0.32
SCNN1A-211ENST00000538957 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
SCNN1A-211ENST00000538957 ASAP1Q9ULH1 1129 aa17.06■□□□□ 0.32
SCNN1A-211ENST00000538957 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
SCNN1A-211ENST00000538957 C4AP0C0L4 1744 aa17.05■□□□□ 0.32
SCNN1A-211ENST00000538957 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
SCNN1A-211ENST00000538957 ADRA2BP18089 450 aa17.05■□□□□ 0.32
SCNN1A-211ENST00000538957 RBM42Q9BTD8 480 aaKnown RBP17.04■□□□□ 0.32
SCNN1A-211ENST00000538957 BRCA1P38398 1863 aaKnown RBP17.03■□□□□ 0.32
SCNN1A-211ENST00000538957 NKX1-1Q15270 411 aaPredicted RBP17.03■□□□□ 0.32
SCNN1A-211ENST00000538957 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.32
SCNN1A-211ENST00000538957 PPM1GO15355 546 aaPredicted RBP17.02■□□□□ 0.32
SCNN1A-211ENST00000538957 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
SCNN1A-211ENST00000538957 ARHGEF1Q92888 912 aaKnown RBP17.02■□□□□ 0.32
SCNN1A-211ENST00000538957 DCAF5Q96JK2 942 aa17.02■□□□□ 0.32
SCNN1A-211ENST00000538957 FYB1O15117 783 aa17.01■□□□□ 0.31
SCNN1A-211ENST00000538957 GYS1P13807 737 aa17.01■□□□□ 0.31
SCNN1A-211ENST00000538957 VEGFAP15692 232 aaPredicted RBP17■□□□□ 0.31
SCNN1A-211ENST00000538957 ATG3Q9NT62 314 aa17■□□□□ 0.31
SCNN1A-211ENST00000538957 ZC3H4Q9UPT8 1303 aaKnown RBP16.99■□□□□ 0.31
SCNN1A-211ENST00000538957 KIF20BQ96Q89 1820 aa16.99■□□□□ 0.31
SCNN1A-211ENST00000538957 RPS6KA4O75676 772 aa16.98■□□□□ 0.31
SCNN1A-211ENST00000538957 RC3H1Q5TC82 1133 aaKnown RBP16.98■□□□□ 0.31
SCNN1A-211ENST00000538957 CNTNAP4Q9C0A0 1308 aa16.97■□□□□ 0.31
SCNN1A-211ENST00000538957 PHKG2P15735 406 aa16.97■□□□□ 0.31
SCNN1A-211ENST00000538957 KCNA3P22001 575 aa16.97■□□□□ 0.31
SCNN1A-211ENST00000538957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCNN1A-211ENST00000538957 SBF1O95248 1867 aa16.96■□□□□ 0.31
SCNN1A-211ENST00000538957 ST20-MTHFSA0A0A6YYL1 179 aa16.95■□□□□ 0.3
SCNN1A-211ENST00000538957 GLTPD2A6NH11 291 aa16.95■□□□□ 0.3
SCNN1A-211ENST00000538957 CHRNA5P30532 468 aa16.95■□□□□ 0.3
SCNN1A-211ENST00000538957 RASSF7Q02833 373 aa16.95■□□□□ 0.3
SCNN1A-211ENST00000538957 EMILIN1Q9Y6C2 1016 aa16.95■□□□□ 0.3
SCNN1A-211ENST00000538957 KDRP35968 1356 aa16.94■□□□□ 0.3
SCNN1A-211ENST00000538957 HSP90AB1P08238 724 aaKnown RBP16.94■□□□□ 0.3
SCNN1A-211ENST00000538957 LMNB1P20700 586 aa16.94■□□□□ 0.3
SCNN1A-211ENST00000538957 AIDAQ96BJ3 306 aa16.94■□□□□ 0.3
SCNN1A-211ENST00000538957 DPY19L2Q6NUT2 758 aa16.93■□□□□ 0.3
SCNN1A-211ENST00000538957 ERVV-2B6SEH9 535 aa16.92■□□□□ 0.3
SCNN1A-211ENST00000538957 TESK2Q96S53 571 aa16.92■□□□□ 0.3
SCNN1A-211ENST00000538957 COL5A3P25940 1745 aaPredicted RBP16.92■□□□□ 0.3
SCNN1A-211ENST00000538957 ZNF831Q5JPB2 1677 aa16.91■□□□□ 0.3
SCNN1A-211ENST00000538957 ZPR1O75312 459 aa16.91■□□□□ 0.3
SCNN1A-211ENST00000538957 CABP4P57796 275 aa16.91■□□□□ 0.3
SCNN1A-211ENST00000538957 EYA1Q99502 592 aa16.91■□□□□ 0.3
SCNN1A-211ENST00000538957 SRP68Q9UHB9 627 aaKnown RBP16.91■□□□□ 0.3
SCNN1A-211ENST00000538957 MKRN1Q9UHC7 482 aaKnown RBP16.91■□□□□ 0.3
SCNN1A-211ENST00000538957 NCAPD2Q15021 1401 aa16.9■□□□□ 0.3
SCNN1A-211ENST00000538957 SLC34A2O95436 690 aa16.9■□□□□ 0.3
SCNN1A-211ENST00000538957 FKBP8Q14318 412 aa16.9■□□□□ 0.3
SCNN1A-211ENST00000538957 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
SCNN1A-211ENST00000538957 USP42Q9H9J4 1324 aaKnown RBP16.9■□□□□ 0.3
SCNN1A-211ENST00000538957 PTCD1O75127 700 aaKnown RBP16.89■□□□□ 0.29
SCNN1A-211ENST00000538957 CRKLP46109 303 aaKnown RBP16.89■□□□□ 0.29
SCNN1A-211ENST00000538957 DDR1Q08345 913 aa16.89■□□□□ 0.29
SCNN1A-211ENST00000538957 CREBZFQ9NS37 354 aa16.89■□□□□ 0.29
SCNN1A-211ENST00000538957 TIAM2Q8IVF5 1701 aa16.89■□□□□ 0.29
SCNN1A-211ENST00000538957 ZNF316A6NFI3 1004 aaPredicted RBP16.88■□□□□ 0.29
SCNN1A-211ENST00000538957 SLC4A9Q96Q91 983 aa16.88■□□□□ 0.29
SCNN1A-211ENST00000538957 TTLL6Q8N841 843 aa16.87■□□□□ 0.29
SCNN1A-211ENST00000538957 WASHC2AQ641Q2 1341 aa16.87■□□□□ 0.29
SCNN1A-211ENST00000538957 MYH14Q7Z406 1995 aaKnown RBP16.86■□□□□ 0.29
SCNN1A-211ENST00000538957 POLRMTO00411 1230 aaKnown RBP16.86■□□□□ 0.29
SCNN1A-211ENST00000538957 CTCFP49711 727 aaPredicted RBP16.86■□□□□ 0.29
SCNN1A-211ENST00000538957 PLEKHO1Q53GL0 409 aaPredicted RBP16.86■□□□□ 0.29
SCNN1A-211ENST00000538957 PRDM10Q9NQV6 1147 aa16.86■□□□□ 0.29
SCNN1A-211ENST00000538957 CCDC88AQ3V6T2 1871 aa16.86■□□□□ 0.29
SCNN1A-211ENST00000538957 FOXN1O15353 648 aa16.85■□□□□ 0.29
SCNN1A-211ENST00000538957 C1orf141Q5JVX7 400 aa16.85■□□□□ 0.29
SCNN1A-211ENST00000538957 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms