RNA–Protein interactions for RNA: ENST00000538792.1

GCSHP4-201, Transcript of glycine cleavage system protein H pseudogene 4, humanhuman

BASIC

Gene GCSHP4, Length 439 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSHP4-201ENST00000538792 NBPF10Q6P3W6 841 aaKnown RBP9.27□□□□□ -0.93
GCSHP4-201ENST00000538792 TBC1D9Q6ZT07 1266 aa9.27□□□□□ -0.93
GCSHP4-201ENST00000538792 NBPF15Q8N660 670 aa9.27□□□□□ -0.93
GCSHP4-201ENST00000538792 NANOS1Q8WY41 292 aaKnown RBP9.27□□□□□ -0.93
GCSHP4-201ENST00000538792 PCDHGA11Q9Y5H2 935 aa9.27□□□□□ -0.93
GCSHP4-201ENST00000538792 USP17L5A8MUK1 530 aa9.26□□□□□ -0.93
GCSHP4-201ENST00000538792 SPATA31C2B4DYI2 1134 aa9.26□□□□□ -0.93
GCSHP4-201ENST00000538792 GDF10P55107 478 aa9.26□□□□□ -0.93
GCSHP4-201ENST00000538792 KRT76Q01546 638 aa9.25□□□□□ -0.93
GCSHP4-201ENST00000538792 EML3Q32P44 896 aa9.25□□□□□ -0.93
GCSHP4-201ENST00000538792 ESCO1Q5FWF5 840 aa9.25□□□□□ -0.93
GCSHP4-201ENST00000538792 VWA5B2Q8N398 1253 aa9.25□□□□□ -0.93
GCSHP4-201ENST00000538792 GLMNQ92990 594 aa9.25□□□□□ -0.93
GCSHP4-201ENST00000538792 ERCC6Q03468 1493 aa9.25□□□□□ -0.93
GCSHP4-201ENST00000538792 TOP2AP11388 1531 aaKnown RBP9.25□□□□□ -0.93
GCSHP4-201ENST00000538792 LAMC3Q9Y6N6 1575 aa9.24□□□□□ -0.93
GCSHP4-201ENST00000538792 CDC14CA4D256 554 aa9.24□□□□□ -0.93
GCSHP4-201ENST00000538792 TMEM229AB2RXF0 380 aa9.24□□□□□ -0.93
GCSHP4-201ENST00000538792 WASLO00401 505 aaPredicted RBP9.24□□□□□ -0.93
GCSHP4-201ENST00000538792 INHAP05111 366 aa9.24□□□□□ -0.93
GCSHP4-201ENST00000538792 ZSCAN10Q96SZ4 725 aaPredicted RBP9.24□□□□□ -0.93
GCSHP4-201ENST00000538792 CADPSQ9ULU8 1353 aa9.24□□□□□ -0.93
GCSHP4-201ENST00000538792 TAS1R3Q7RTX0 852 aa9.23□□□□□ -0.93
GCSHP4-201ENST00000538792 KIF21AQ7Z4S6 1674 aa9.23□□□□□ -0.93
GCSHP4-201ENST00000538792 PHKA2P46019 1235 aa9.22□□□□□ -0.93
GCSHP4-201ENST00000538792 GTF2IP78347 998 aa9.22□□□□□ -0.93
GCSHP4-201ENST00000538792 INSM1Q01101 510 aaPredicted RBP9.22□□□□□ -0.93
GCSHP4-201ENST00000538792 TLR1Q15399 786 aa9.22□□□□□ -0.93
GCSHP4-201ENST00000538792 RNFT1Q5M7Z0 435 aa9.22□□□□□ -0.93
GCSHP4-201ENST00000538792 NOD1Q9Y239 953 aa9.22□□□□□ -0.93
GCSHP4-201ENST00000538792 DYRK1BQ9Y463 629 aa9.22□□□□□ -0.93
GCSHP4-201ENST00000538792 THOC2Q8NI27 1593 aaKnown RBP9.21□□□□□ -0.93
GCSHP4-201ENST00000538792 USP17L3A6NCW0 530 aa9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 USP17L4A6NCW7 530 aa9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 ATP9BO43861 1147 aa9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 LZTS3O60299 673 aaPredicted RBP9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 C4orf17Q53FE4 359 aa9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 WDR44Q5JSH3 913 aa9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 USP17L2Q6R6M4 530 aa9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 SV2AQ7L0J3 742 aa9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 USP17L1Q7RTZ2 530 aa9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 GAS2L1Q99501 681 aaPredicted RBP9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 COL25A1Q9BXS0 654 aaPredicted RBP9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 TIMMDC1Q9NPL8 285 aa9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 SERTAD1Q9UHV2 236 aa9.21□□□□□ -0.94
GCSHP4-201ENST00000538792 DBN1Q16643 649 aa9.2□□□□□ -0.94
GCSHP4-201ENST00000538792 TMEM214Q6NUQ4 689 aaKnown RBP9.2□□□□□ -0.94
GCSHP4-201ENST00000538792 PLEKHM2Q8IWE5 1019 aa9.2□□□□□ -0.94
GCSHP4-201ENST00000538792 SMTNP53814 917 aa9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 RIPOR1Q6ZS17 1223 aa9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 PPARGC1BQ86YN6 1023 aaKnown RBP9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 TRIM22Q8IYM9 498 aa9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 ZNF837Q96EG3 531 aaPredicted RBP9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 CNTNAP3BQ96NU0 1288 aa9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 CNTNAP3Q9BZ76 1288 aa9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 TFIP11Q9UBB9 837 aaKnown RBP9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 KIAA1024Q9UPX6 916 aa9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 USP3Q9Y6I4 520 aa9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 CUX2O14529 1486 aa9.19□□□□□ -0.94
GCSHP4-201ENST00000538792 CCDC88BA6NC98 1476 aa9.18□□□□□ -0.94
GCSHP4-201ENST00000538792 THBS1P07996 1170 aa9.18□□□□□ -0.94
GCSHP4-201ENST00000538792 CFTRP13569 1480 aa9.18□□□□□ -0.94
GCSHP4-201ENST00000538792 CLDN10P78369 228 aa9.18□□□□□ -0.94
GCSHP4-201ENST00000538792 GNASQ5JWF2 1037 aa9.18□□□□□ -0.94
GCSHP4-201ENST00000538792 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.18□□□□□ -0.94
GCSHP4-201ENST00000538792 SLC4A9Q96Q91 983 aa9.18□□□□□ -0.94
GCSHP4-201ENST00000538792 PDS5BQ9NTI5 1447 aa9.17□□□□□ -0.94
GCSHP4-201ENST00000538792 ZBTB7BO15156 539 aaPredicted RBP9.17□□□□□ -0.94
GCSHP4-201ENST00000538792 PSME1Q06323 249 aa9.17□□□□□ -0.94
GCSHP4-201ENST00000538792 ZNF295-AS1Q8N0V1 137 aa9.17□□□□□ -0.94
GCSHP4-201ENST00000538792 ZSCAN1Q8NBB4 408 aa9.17□□□□□ -0.94
GCSHP4-201ENST00000538792 RHBDD1Q8TEB9 315 aa9.17□□□□□ -0.94
GCSHP4-201ENST00000538792 CALR3Q96L12 384 aaKnown RBP9.17□□□□□ -0.94
GCSHP4-201ENST00000538792 GPAMQ9HCL2 828 aa9.17□□□□□ -0.94
GCSHP4-201ENST00000538792 ZNF777Q9ULD5 760 aaPredicted RBP9.17□□□□□ -0.94
GCSHP4-201ENST00000538792 IQSEC3Q9UPP2 1182 aaPredicted RBP9.17□□□□□ -0.94
GCSHP4-201ENST00000538792 PALM3A6NDB9 673 aaPredicted RBP9.16□□□□□ -0.94
GCSHP4-201ENST00000538792 F11P03951 625 aa9.16□□□□□ -0.94
GCSHP4-201ENST00000538792 GAS6Q14393 721 aa9.16□□□□□ -0.94
GCSHP4-201ENST00000538792 MTFR1Q15390 333 aa9.16□□□□□ -0.94
GCSHP4-201ENST00000538792 ZNF358Q9NW07 568 aa9.16□□□□□ -0.94
GCSHP4-201ENST00000538792 MKRN1Q9UHC7 482 aaKnown RBP9.16□□□□□ -0.94
GCSHP4-201ENST00000538792 MAFBQ9Y5Q3 323 aaPredicted RBP9.16□□□□□ -0.94
GCSHP4-201ENST00000538792 A6NJY4 79 aa9.15□□□□□ -0.94
GCSHP4-201ENST00000538792 GPR25O00155 361 aa9.15□□□□□ -0.94
GCSHP4-201ENST00000538792 GTF2E1P29083 439 aaPredicted RBP9.15□□□□□ -0.94
GCSHP4-201ENST00000538792 A0A1B0GTH6 734 aa9.14□□□□□ -0.95
GCSHP4-201ENST00000538792 MSX1P28360 303 aa9.14□□□□□ -0.95
GCSHP4-201ENST00000538792 PLA2G4AP47712 749 aa9.14□□□□□ -0.95
GCSHP4-201ENST00000538792 TRIM50Q86XT4 487 aa9.14□□□□□ -0.95
GCSHP4-201ENST00000538792 GTPBP3Q969Y2 492 aaKnown RBP9.14□□□□□ -0.95
GCSHP4-201ENST00000538792 PPP1R12CQ9BZL4 782 aa9.14□□□□□ -0.95
GCSHP4-201ENST00000538792 STK17AQ9UEE5 414 aa9.14□□□□□ -0.95
GCSHP4-201ENST00000538792 OGFOD1Q8N543 542 aa9.13□□□□□ -0.95
GCSHP4-201ENST00000538792 TPCN2Q8NHX9 752 aa9.13□□□□□ -0.95
GCSHP4-201ENST00000538792 GMCL1Q96IK5 515 aa9.13□□□□□ -0.95
GCSHP4-201ENST00000538792 FANCD2Q9BXW9 1451 aa9.13□□□□□ -0.95
GCSHP4-201ENST00000538792 H7C1W4 665 aa9.12□□□□□ -0.95
GCSHP4-201ENST00000538792 CDK2AP1O14519 115 aa9.12□□□□□ -0.95
GCSHP4-201ENST00000538792 DKK1O94907 266 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms