RNA–Protein interactions for RNA: ENST00000538783.1

LINC02439-201, Transcript of long intergenic non-protein coding RNA 2439, humanhuman

TSL 3 BASIC

Gene LINC02439, Length 450 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02439-201ENST00000538783 YBX3P16989 372 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC02439-201ENST00000538783 SULT6B1Q6IMI4 303 aa12.91□□□□□ -0.34
LINC02439-201ENST00000538783 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
LINC02439-201ENST00000538783 GIGYF1O75420 1035 aaPredicted RBP12.9□□□□□ -0.34
LINC02439-201ENST00000538783 AMIGO3Q86WK7 504 aa12.9□□□□□ -0.34
LINC02439-201ENST00000538783 C1QTNF8P60827 252 aa12.89□□□□□ -0.35
LINC02439-201ENST00000538783 AEBP1Q8IUX7 1158 aa12.89□□□□□ -0.35
LINC02439-201ENST00000538783 NLGN1Q8N2Q7 840 aa12.89□□□□□ -0.35
LINC02439-201ENST00000538783 PKD1L3Q7Z443 1732 aa12.88□□□□□ -0.35
LINC02439-201ENST00000538783 MAP2P11137 1827 aaKnown RBP12.88□□□□□ -0.35
LINC02439-201ENST00000538783 PTCD1O75127 700 aaKnown RBP12.88□□□□□ -0.35
LINC02439-201ENST00000538783 RFC4P35249 363 aa12.88□□□□□ -0.35
LINC02439-201ENST00000538783 RC3H1Q5TC82 1133 aaKnown RBP12.88□□□□□ -0.35
LINC02439-201ENST00000538783 NFATC2IPQ8NCF5 419 aa12.88□□□□□ -0.35
LINC02439-201ENST00000538783 C5P01031 1676 aa12.88□□□□□ -0.35
LINC02439-201ENST00000538783 SENP3-EIF4A1A0A087X0R7 540 aa12.87□□□□□ -0.35
LINC02439-201ENST00000538783 MMP10P09238 476 aa12.87□□□□□ -0.35
LINC02439-201ENST00000538783 ADRA2BP18089 450 aa12.87□□□□□ -0.35
LINC02439-201ENST00000538783 IL13P35225 146 aa12.87□□□□□ -0.35
LINC02439-201ENST00000538783 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
LINC02439-201ENST00000538783 C4BP0C0L5 1744 aa12.87□□□□□ -0.35
LINC02439-201ENST00000538783 ANKRD26Q9UPS8 1709 aa12.87□□□□□ -0.35
LINC02439-201ENST00000538783 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
LINC02439-201ENST00000538783 ARHGEF1Q92888 912 aaKnown RBP12.86□□□□□ -0.35
LINC02439-201ENST00000538783 KIF7Q2M1P5 1343 aa12.86□□□□□ -0.35
LINC02439-201ENST00000538783 TUBGCP6Q96RT7 1819 aa12.85□□□□□ -0.35
LINC02439-201ENST00000538783 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
LINC02439-201ENST00000538783 RPS6KA4O75676 772 aa12.85□□□□□ -0.35
LINC02439-201ENST00000538783 CC2D1BQ5T0F9 858 aaKnown RBP12.85□□□□□ -0.35
LINC02439-201ENST00000538783 SLC4A9Q96Q91 983 aa12.85□□□□□ -0.35
LINC02439-201ENST00000538783 CNTNAP4Q9C0A0 1308 aa12.85□□□□□ -0.35
LINC02439-201ENST00000538783 ITGB4P16144 1822 aa12.84□□□□□ -0.35
LINC02439-201ENST00000538783 CNGB1Q14028 1251 aaPredicted RBP12.84□□□□□ -0.35
LINC02439-201ENST00000538783 AKAP4Q5JQC9 854 aa12.84□□□□□ -0.35
LINC02439-201ENST00000538783 GPBP1L1Q9HC44 474 aaPredicted RBP12.84□□□□□ -0.35
LINC02439-201ENST00000538783 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
LINC02439-201ENST00000538783 PARP3Q9Y6F1 533 aa12.84□□□□□ -0.35
LINC02439-201ENST00000538783 COL24A1Q17RW2 1714 aa12.84□□□□□ -0.35
LINC02439-201ENST00000538783 DIAPH1O60610 1272 aaKnown RBP12.83□□□□□ -0.36
LINC02439-201ENST00000538783 HMOX1P09601 288 aa12.83□□□□□ -0.36
LINC02439-201ENST00000538783 CHD4Q14839 1912 aa12.83□□□□□ -0.36
LINC02439-201ENST00000538783 KDRP35968 1356 aa12.82□□□□□ -0.36
LINC02439-201ENST00000538783 KDM6AO15550 1401 aaPredicted RBP12.82□□□□□ -0.36
LINC02439-201ENST00000538783 CRKLP46109 303 aaKnown RBP12.82□□□□□ -0.36
LINC02439-201ENST00000538783 TGFB2P61812 414 aa12.82□□□□□ -0.36
LINC02439-201ENST00000538783 GYS1P13807 737 aa12.81□□□□□ -0.36
LINC02439-201ENST00000538783 ZNF526Q8TF50 670 aaPredicted RBP12.81□□□□□ -0.36
LINC02439-201ENST00000538783 SLC52A2Q9HAB3 445 aa12.81□□□□□ -0.36
LINC02439-201ENST00000538783 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
LINC02439-201ENST00000538783 TAF1LQ8IZX4 1826 aa12.81□□□□□ -0.36
LINC02439-201ENST00000538783 ATP10DQ9P241 1426 aa12.8□□□□□ -0.36
LINC02439-201ENST00000538783 A0A0G2JLW4 131 aa12.8□□□□□ -0.36
LINC02439-201ENST00000538783 U2SURPO15042 1029 aaKnown RBP12.8□□□□□ -0.36
LINC02439-201ENST00000538783 ZPR1O75312 459 aa12.8□□□□□ -0.36
LINC02439-201ENST00000538783 PER1O15534 1290 aaPredicted RBP12.79□□□□□ -0.36
LINC02439-201ENST00000538783 RNMTO43148 476 aaKnown RBP12.79□□□□□ -0.36
LINC02439-201ENST00000538783 LGR6Q9HBX8 967 aa12.79□□□□□ -0.36
LINC02439-201ENST00000538783 FCHSD2O94868 740 aa12.78□□□□□ -0.36
LINC02439-201ENST00000538783 DPEP1P16444 411 aa12.78□□□□□ -0.36
LINC02439-201ENST00000538783 MTHFSDQ2M296 383 aaKnown RBP12.78□□□□□ -0.36
LINC02439-201ENST00000538783 ARHGAP27Q6ZUM4 889 aa12.78□□□□□ -0.36
LINC02439-201ENST00000538783 SRP68Q9UHB9 627 aaKnown RBP12.78□□□□□ -0.36
LINC02439-201ENST00000538783 UBR3Q6ZT12 1888 aa12.78□□□□□ -0.36
LINC02439-201ENST00000538783 SLC39A6Q13433 755 aa12.77□□□□□ -0.37
LINC02439-201ENST00000538783 FKBP8Q14318 412 aa12.77□□□□□ -0.37
LINC02439-201ENST00000538783 INTS5Q6P9B9 1019 aaKnown RBP12.77□□□□□ -0.37
LINC02439-201ENST00000538783 DNAJC10Q8IXB1 793 aa12.77□□□□□ -0.37
LINC02439-201ENST00000538783 TTC5Q8N0Z6 440 aa12.77□□□□□ -0.37
LINC02439-201ENST00000538783 TEFQ10587 303 aa12.76□□□□□ -0.37
LINC02439-201ENST00000538783 CFAP53Q96M91 514 aa12.76□□□□□ -0.37
LINC02439-201ENST00000538783 PIM2Q9P1W9 311 aa12.76□□□□□ -0.37
LINC02439-201ENST00000538783 USP42Q9H9J4 1324 aaKnown RBP12.76□□□□□ -0.37
LINC02439-201ENST00000538783 STARD3NLO95772 234 aa12.75□□□□□ -0.37
LINC02439-201ENST00000538783 DALRD3Q5D0E6 543 aaKnown RBP12.75□□□□□ -0.37
LINC02439-201ENST00000538783 USPL1Q5W0Q7 1092 aa12.75□□□□□ -0.37
LINC02439-201ENST00000538783 GAS2L2Q8NHY3 880 aa12.75□□□□□ -0.37
LINC02439-201ENST00000538783 PXDNLA1KZ92 1463 aa12.74□□□□□ -0.37
LINC02439-201ENST00000538783 C10orf71Q711Q0 1435 aa12.74□□□□□ -0.37
LINC02439-201ENST00000538783 GNAT3A8MTJ3 354 aa12.74□□□□□ -0.37
LINC02439-201ENST00000538783 CYP19A1P11511 503 aaPredicted RBP12.74□□□□□ -0.37
LINC02439-201ENST00000538783 NPM2Q86SE8 214 aaKnown RBP12.74□□□□□ -0.37
LINC02439-201ENST00000538783 VSIG10Q8N0Z9 540 aa12.74□□□□□ -0.37
LINC02439-201ENST00000538783 NUDCQ9Y266 331 aa12.74□□□□□ -0.37
LINC02439-201ENST00000538783 CICQ96RK0 1608 aaPredicted RBP12.73□□□□□ -0.37
LINC02439-201ENST00000538783 NPC1L1Q9UHC9 1359 aa12.73□□□□□ -0.37
LINC02439-201ENST00000538783 CANXP27824 592 aaKnown RBP12.73□□□□□ -0.37
LINC02439-201ENST00000538783 DDR1Q08345 913 aa12.73□□□□□ -0.37
LINC02439-201ENST00000538783 NARFQ9UHQ1 456 aa12.73□□□□□ -0.37
LINC02439-201ENST00000538783 ADCY9O60503 1353 aa12.72□□□□□ -0.37
LINC02439-201ENST00000538783 SOS1Q07889 1333 aaPredicted RBP12.72□□□□□ -0.37
LINC02439-201ENST00000538783 A0A087WZG4 1122 aa12.72□□□□□ -0.37
LINC02439-201ENST00000538783 TM4SF1P30408 202 aa12.72□□□□□ -0.37
LINC02439-201ENST00000538783 TEX13AQ9BXU3 409 aaPredicted RBP12.72□□□□□ -0.37
LINC02439-201ENST00000538783 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
LINC02439-201ENST00000538783 POLRMTO00411 1230 aaKnown RBP12.71□□□□□ -0.37
LINC02439-201ENST00000538783 ZBTB1Q9Y2K1 713 aa12.71□□□□□ -0.37
LINC02439-201ENST00000538783 CEP350Q5VT06 3117 aa12.71□□□□□ -0.38
LINC02439-201ENST00000538783 KCNA3P22001 575 aa12.7□□□□□ -0.38
LINC02439-201ENST00000538783 CHRNA5P30532 468 aa12.7□□□□□ -0.38
LINC02439-201ENST00000538783 C9orf131Q5VYM1 1079 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms