RNA–Protein interactions for RNA: ENST00000538335.1

LINC01089-207, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 3 BASIC

Gene LINC01089, Length 630 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-207ENST00000538335 ATG3Q9NT62 314 aa38.24■■■■□ 3.71
LINC01089-207ENST00000538335 SSFA2P28290 1259 aa38.22■■■■□ 3.71
LINC01089-207ENST00000538335 LINC00116Q8NCU8 138 aa38.19■■■■□ 3.7
LINC01089-207ENST00000538335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP38.18■■■■□ 3.7
LINC01089-207ENST00000538335 DIAPH1O60610 1272 aaKnown RBP38.18■■■■□ 3.7
LINC01089-207ENST00000538335 MSL1Q68DK7 614 aa38.18■■■■□ 3.7
LINC01089-207ENST00000538335 KDM6AO15550 1401 aaPredicted RBP38.18■■■■□ 3.7
LINC01089-207ENST00000538335 PHF14O94880 888 aa38.17■■■■□ 3.7
LINC01089-207ENST00000538335 ITPK1Q13572 414 aa38.15■■■■□ 3.7
LINC01089-207ENST00000538335 GPR162Q16538 588 aa38.15■■■■□ 3.7
LINC01089-207ENST00000538335 RBM42Q9BTD8 480 aaKnown RBP38.15■■■■□ 3.7
LINC01089-207ENST00000538335 GNPATO15228 680 aa38.14■■■■□ 3.7
LINC01089-207ENST00000538335 AKAP4Q5JQC9 854 aa38.14■■■■□ 3.7
LINC01089-207ENST00000538335 UBR3Q6ZT12 1888 aa38.11■■■■□ 3.69
LINC01089-207ENST00000538335 HMOX1P09601 288 aa38.09■■■■□ 3.69
LINC01089-207ENST00000538335 CNGB1Q14028 1251 aaPredicted RBP38.08■■■■□ 3.69
LINC01089-207ENST00000538335 RTCBQ9Y3I0 505 aaKnown RBP38.08■■■■□ 3.69
LINC01089-207ENST00000538335 AMIGO3Q86WK7 504 aa38.07■■■■□ 3.68
LINC01089-207ENST00000538335 NFATC2IPQ8NCF5 419 aa38.07■■■■□ 3.68
LINC01089-207ENST00000538335 CD2APQ9Y5K6 639 aa38.07■■■■□ 3.68
LINC01089-207ENST00000538335 ZNF831Q5JPB2 1677 aa38.07■■■■□ 3.68
LINC01089-207ENST00000538335 RC3H1Q5TC82 1133 aaKnown RBP38.06■■■■□ 3.68
LINC01089-207ENST00000538335 PELP1Q8IZL8 1130 aaKnown RBP38.06■■■■□ 3.68
LINC01089-207ENST00000538335 NLGN2Q8NFZ4 835 aa38.05■■■■□ 3.68
LINC01089-207ENST00000538335 CNTNAP4Q9C0A0 1308 aa38.04■■■■□ 3.68
LINC01089-207ENST00000538335 UTRNP46939 3433 aa38.03■■■■□ 3.68
LINC01089-207ENST00000538335 ADRA2BP18089 450 aa38.03■■■■□ 3.68
LINC01089-207ENST00000538335 TRAPPC3LQ5T215 181 aa38.02■■■■□ 3.68
LINC01089-207ENST00000538335 SLC4A9Q96Q91 983 aa38.02■■■■□ 3.68
LINC01089-207ENST00000538335 PTCD1O75127 700 aaKnown RBP38.01■■■■□ 3.68
LINC01089-207ENST00000538335 CFAP53Q96M91 514 aa38.01■■■■□ 3.68
LINC01089-207ENST00000538335 U2SURPO15042 1029 aaKnown RBP37.99■■■■□ 3.67
LINC01089-207ENST00000538335 SMIM5Q71RC9 77 aa37.99■■■■□ 3.67
LINC01089-207ENST00000538335 SLC52A2Q9HAB3 445 aa37.99■■■■□ 3.67
LINC01089-207ENST00000538335 GRIN3BO60391 1043 aa37.98■■■■□ 3.67
LINC01089-207ENST00000538335 SCN11AQ9UI33 1791 aa37.98■■■■□ 3.67
LINC01089-207ENST00000538335 CHD4Q14839 1912 aa37.97■■■■□ 3.67
LINC01089-207ENST00000538335 RNMTO43148 476 aaKnown RBP37.96■■■■□ 3.67
LINC01089-207ENST00000538335 RPS6KA4O75676 772 aa37.96■■■■□ 3.67
LINC01089-207ENST00000538335 MTHFSDQ2M296 383 aaKnown RBP37.96■■■■□ 3.67
LINC01089-207ENST00000538335 COL3A1P02461 1466 aaPredicted RBP37.96■■■■□ 3.67
LINC01089-207ENST00000538335 NLGN1Q8N2Q7 840 aa37.94■■■■□ 3.66
LINC01089-207ENST00000538335 RFC4P35249 363 aa37.93■■■■□ 3.66
LINC01089-207ENST00000538335 LGR6Q9HBX8 967 aa37.93■■■■□ 3.66
LINC01089-207ENST00000538335 GAS2L2Q8NHY3 880 aa37.92■■■■□ 3.66
LINC01089-207ENST00000538335 COL5A3P25940 1745 aaPredicted RBP37.92■■■■□ 3.66
LINC01089-207ENST00000538335 NUDCQ9Y266 331 aa37.91■■■■□ 3.66
LINC01089-207ENST00000538335 MRC1P22897 1456 aa37.9■■■■□ 3.66
LINC01089-207ENST00000538335 ARHGEF1Q92888 912 aaKnown RBP37.9■■■■□ 3.66
LINC01089-207ENST00000538335 CRKLP46109 303 aaKnown RBP37.89■■■■□ 3.66
LINC01089-207ENST00000538335 MMP10P09238 476 aa37.88■■■■□ 3.65
LINC01089-207ENST00000538335 ZNF784Q8NCA9 323 aaPredicted RBP37.87■■■■□ 3.65
LINC01089-207ENST00000538335 GOLGB1Q14789 3259 aaKnown RBP37.85■■■■□ 3.65
LINC01089-207ENST00000538335 CICQ96RK0 1608 aaPredicted RBP37.84■■■■□ 3.65
LINC01089-207ENST00000538335 YBX3P16989 372 aaKnown RBP eCLIP37.84■■■■□ 3.65
LINC01089-207ENST00000538335 GNAT3A8MTJ3 354 aa37.83■■■■□ 3.65
LINC01089-207ENST00000538335 GYS1P13807 737 aa37.81■■■■□ 3.64
LINC01089-207ENST00000538335 PPP2R1AP30153 589 aa37.81■■■■□ 3.64
LINC01089-207ENST00000538335 ADAMTS7Q9UKP4 1686 aa37.8■■■■□ 3.64
LINC01089-207ENST00000538335 TEFQ10587 303 aa37.8■■■■□ 3.64
LINC01089-207ENST00000538335 SLC39A6Q13433 755 aa37.8■■■■□ 3.64
LINC01089-207ENST00000538335 TTC5Q8N0Z6 440 aa37.8■■■■□ 3.64
LINC01089-207ENST00000538335 VSIG10Q8N0Z9 540 aa37.8■■■■□ 3.64
LINC01089-207ENST00000538335 MYH14Q7Z406 1995 aaKnown RBP37.79■■■■□ 3.64
LINC01089-207ENST00000538335 DNAJC10Q8IXB1 793 aa37.79■■■■□ 3.64
LINC01089-207ENST00000538335 CCDC87Q9NVE4 849 aa37.79■■■■□ 3.64
LINC01089-207ENST00000538335 PARP3Q9Y6F1 533 aa37.79■■■■□ 3.64
LINC01089-207ENST00000538335 TJP1Q07157 1748 aa37.78■■■■□ 3.64
LINC01089-207ENST00000538335 PRKAR2BP31323 418 aa37.76■■■■□ 3.64
LINC01089-207ENST00000538335 INTS5Q6P9B9 1019 aaKnown RBP37.75■■■■□ 3.63
LINC01089-207ENST00000538335 VIRMAQ69YN4 1812 aaKnown RBP37.75■■■■□ 3.63
LINC01089-207ENST00000538335 U2AF1L5P0DN76 240 aaPredicted RBP37.74■■■■□ 3.63
LINC01089-207ENST00000538335 U2AF1Q01081 240 aaKnown RBP eCLIP37.74■■■■□ 3.632e-6■■□□□ 11.9
LINC01089-207ENST00000538335 RSPH6AQ9H0K4 717 aa37.74■■■■□ 3.63
LINC01089-207ENST00000538335 USP42Q9H9J4 1324 aaKnown RBP37.74■■■■□ 3.63
LINC01089-207ENST00000538335 CYP19A1P11511 503 aaPredicted RBP37.73■■■■□ 3.63
LINC01089-207ENST00000538335 TGFB2P61812 414 aa37.73■■■■□ 3.63
LINC01089-207ENST00000538335 KCPQ6ZWJ8 1503 aa37.72■■■■□ 3.63
LINC01089-207ENST00000538335 ZPR1O75312 459 aa37.72■■■■□ 3.63
LINC01089-207ENST00000538335 IL17REQ8NFR9 667 aa37.71■■■■□ 3.63
LINC01089-207ENST00000538335 C4AP0C0L4 1744 aa37.7■■■■□ 3.63
LINC01089-207ENST00000538335 FCHSD2O94868 740 aa37.7■■■■□ 3.63
LINC01089-207ENST00000538335 SOS1Q07889 1333 aaPredicted RBP37.69■■■■□ 3.62
LINC01089-207ENST00000538335 STARD3NLO95772 234 aa37.69■■■■□ 3.62
LINC01089-207ENST00000538335 SRP68Q9UHB9 627 aaKnown RBP37.68■■■■□ 3.62
LINC01089-207ENST00000538335 C10orf71Q711Q0 1435 aa37.68■■■■□ 3.62
LINC01089-207ENST00000538335 TEX13AQ9BXU3 409 aaPredicted RBP37.67■■■■□ 3.62
LINC01089-207ENST00000538335 ZNF790Q6PG37 636 aa37.66■■■■□ 3.62
LINC01089-207ENST00000538335 RTF1Q92541 710 aaKnown RBP37.66■■■■□ 3.62
LINC01089-207ENST00000538335 PHACTR3Q96KR7 559 aa37.66■■■■□ 3.62
LINC01089-207ENST00000538335 FKBP8Q14318 412 aa37.65■■■■□ 3.62
LINC01089-207ENST00000538335 CEMIPQ8WUJ3 1361 aa37.65■■■■□ 3.62
LINC01089-207ENST00000538335 NEFMP07197 916 aa37.64■■■■□ 3.62
LINC01089-207ENST00000538335 ZBTB1Q9Y2K1 713 aa37.63■■■■□ 3.61
LINC01089-207ENST00000538335 COL15A1P39059 1388 aa37.63■■■■□ 3.61
LINC01089-207ENST00000538335 KIF13BQ9NQT8 1826 aa37.63■■■■□ 3.61
LINC01089-207ENST00000538335 PXDNLA1KZ92 1463 aa37.63■■■■□ 3.61
LINC01089-207ENST00000538335 FMNL2Q96PY5 1086 aa37.62■■■■□ 3.61
LINC01089-207ENST00000538335 WWC3Q9ULE0 1092 aa37.62■■■■□ 3.61
LINC01089-207ENST00000538335 UBR2Q8IWV8 1755 aa37.62■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 193.4 ms