RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 WASHC4Q2M389 1173 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 SPA17Q15506 151 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 PPM1EQ8WY54 764 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 NUP133Q8WUM0 1156 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 SERPINA10Q9UK55 444 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 RAD21O60216 631 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 XBP1P17861 261 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 KLHL10Q6JEL2 608 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 TPRP12270 2363 aaKnown RBP6.58□□□□□ -1.36
CSMD1-215ENST00000537824 HSF2BPO75031 334 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 UVSSAQ2YD98 709 aa6.58□□□□□ -1.36
CSMD1-215ENST00000537824 KIF4AO95239 1232 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 SLU7O95391 586 aaKnown RBP6.57□□□□□ -1.36
CSMD1-215ENST00000537824 FSIP1Q8NA03 581 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 HSP90AB4PQ58FF6 505 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 CCDC150Q8NCX0 1101 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 SYCP1Q15431 976 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 SWAP70Q9UH65 585 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 NBPF11Q86T75 865 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 PNISRQ8TF01 805 aaKnown RBP6.57□□□□□ -1.36
CSMD1-215ENST00000537824 EVPLQ92817 2033 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 KRT18P05783 430 aaKnown RBP6.57□□□□□ -1.36
CSMD1-215ENST00000537824 U2AF2P26368 475 aaKnown RBP eCLIP6.57□□□□□ -1.36
CSMD1-215ENST00000537824 KIF5BP33176 963 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 CASTP20810 708 aaKnown RBP6.57□□□□□ -1.36
CSMD1-215ENST00000537824 NAP1L3Q99457 506 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-215ENST00000537824 FYB1O15117 783 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 C17orf53Q8N3J3 647 aaPredicted RBP6.57□□□□□ -1.36
CSMD1-215ENST00000537824 PPP6R1Q9UPN7 881 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 HIP1O00291 1037 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 PAFAH1B1P43034 410 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 ZEB2O60315 1214 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 SSBP05455 408 aaKnown RBP eCLIP6.57□□□□□ -1.36
CSMD1-215ENST00000537824 MATR3P43243 847 aaKnown RBP eCLIP6.57□□□□□ -1.36
CSMD1-215ENST00000537824 ANKS4BQ8N8V4 417 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 TRAK1Q9UPV9 953 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 MRVI1Q9Y6F6 885 aa6.57□□□□□ -1.36
CSMD1-215ENST00000537824 ZSCAN31Q96LW9 406 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-215ENST00000537824 WASHC2CQ9Y4E1 1318 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 GSTTP1A0A1W2PQM5 241 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 CCDC12Q8WUD4 166 aaPredicted RBP6.56□□□□□ -1.36
CSMD1-215ENST00000537824 GCC1Q96CN9 775 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 FHOD3Q2V2M9 1422 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 NACADO15069 1562 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 SKILP12757 684 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 DMTNQ08495 405 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 C20orf194Q5TEA3 1177 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 BLOC1S2Q6QNY1 142 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 B4GALNT4Q76KP1 1039 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 DNAI1Q9UI46 699 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 FAM184BQ9ULE4 1060 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 BIN1O00499 593 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 SPECC1Q5M775 1068 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 KLHL40Q2TBA0 621 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 NSRP1Q9H0G5 558 aaKnown RBP6.56□□□□□ -1.36
CSMD1-215ENST00000537824 TRIP11Q15643 1979 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 SURF6O75683 361 aaKnown RBP6.56□□□□□ -1.36
CSMD1-215ENST00000537824 PRIM1P49642 420 aaKnown RBP6.56□□□□□ -1.36
CSMD1-215ENST00000537824 TSR2Q969E8 191 aaKnown RBP6.56□□□□□ -1.36
CSMD1-215ENST00000537824 TSPYL4Q9UJ04 414 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 PLEKHH1Q9ULM0 1364 aa6.56□□□□□ -1.36
CSMD1-215ENST00000537824 MVPQ14764 893 aaKnown RBP6.56□□□□□ -1.36
CSMD1-215ENST00000537824 PHACTR2O75167 634 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 GIMAP6Q6P9H5 292 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 CFAP57Q96MR6 1250 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 LACTBP83111 547 aaPredicted RBP6.55□□□□□ -1.36
CSMD1-215ENST00000537824 MYRIPQ8NFW9 859 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 ZHX3Q9H4I2 956 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 GOLGA6L9A6NEM1 432 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 BUB1BO60566 1050 aaPredicted RBP6.55□□□□□ -1.36
CSMD1-215ENST00000537824 FBF1Q8TES7 1133 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 HMOX1P09601 288 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 PCK1P35558 622 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 TBC1D32Q96NH3 1257 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 DIAPH1O60610 1272 aaKnown RBP6.55□□□□□ -1.36
CSMD1-215ENST00000537824 INPP5BP32019 993 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 FMNL3Q8IVF7 1028 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 TANGO6Q9C0B7 1094 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 ZNF165P49910 485 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 HDXQ7Z353 690 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 NUP88Q99567 741 aaPredicted RBP6.55□□□□□ -1.36
CSMD1-215ENST00000537824 GNAI2P04899 355 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 LRSAM1Q6UWE0 723 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 CNKSR2Q8WXI2 1034 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 MYH1P12882 1939 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 MYH2Q9UKX2 1941 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 MYH4Q9Y623 1939 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 GCKP35557 465 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 GNAI1P63096 354 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 SART3Q15020 963 aaKnown RBP6.55□□□□□ -1.36
CSMD1-215ENST00000537824 RPAINQ86UA6 219 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 BRD2P25440 801 aaKnown RBP6.55□□□□□ -1.36
CSMD1-215ENST00000537824 TTC3P53804 2025 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 CUX1P39880 1505 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 CCDC184Q52MB2 194 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 C6orf163Q5TEZ5 329 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 FAM114A1Q8IWE2 563 aa6.55□□□□□ -1.36
CSMD1-215ENST00000537824 GCOM1H8Y6P7 765 aaPredicted RBP6.55□□□□□ -1.36
CSMD1-215ENST00000537824 CTAGE5O15320 804 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms