RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PRM3Q9NNZ6 103 aa12.26□□□□□ -0.45
CCDC7-208ENST00000537047 MCM6Q14566 821 aa12.25□□□□□ -0.45
CCDC7-208ENST00000537047 SUZ12Q15022 739 aaKnown RBP12.25□□□□□ -0.45
CCDC7-208ENST00000537047 SCARF2Q96GP6 870 aaPredicted RBP12.25□□□□□ -0.45
CCDC7-208ENST00000537047 ZSCAN10Q96SZ4 725 aaPredicted RBP12.25□□□□□ -0.45
CCDC7-208ENST00000537047 F11P03951 625 aa12.24□□□□□ -0.45
CCDC7-208ENST00000537047 KANK3Q6NY19 840 aa12.23□□□□□ -0.45
CCDC7-208ENST00000537047 NUCKS1Q9H1E3 243 aaKnown RBP12.23□□□□□ -0.45
CCDC7-208ENST00000537047 CHIC2Q9UKJ5 165 aa12.23□□□□□ -0.45
CCDC7-208ENST00000537047 DNMT3AQ9Y6K1 912 aaPredicted RBP12.23□□□□□ -0.45
CCDC7-208ENST00000537047 USP4Q13107 963 aa12.22□□□□□ -0.45
CCDC7-208ENST00000537047 C4orf17Q53FE4 359 aa12.22□□□□□ -0.45
CCDC7-208ENST00000537047 ACDQ96AP0 544 aa12.22□□□□□ -0.45
CCDC7-208ENST00000537047 TMEM214Q6NUQ4 689 aaKnown RBP12.21□□□□□ -0.45
CCDC7-208ENST00000537047 TRERF1Q96PN7 1200 aa12.21□□□□□ -0.45
CCDC7-208ENST00000537047 ENAMQ9NRM1 1142 aa12.2□□□□□ -0.46
CCDC7-208ENST00000537047 BCRP11274 1271 aa12.19□□□□□ -0.46
CCDC7-208ENST00000537047 SCNN1DP51172 638 aa12.19□□□□□ -0.46
CCDC7-208ENST00000537047 RUBCNLQ9H714 662 aa12.19□□□□□ -0.46
CCDC7-208ENST00000537047 PIK3CDO00329 1044 aa12.18□□□□□ -0.46
CCDC7-208ENST00000537047 MX2P20592 715 aa12.18□□□□□ -0.46
CCDC7-208ENST00000537047 CNTNAP5Q8WYK1 1306 aa12.17□□□□□ -0.46
CCDC7-208ENST00000537047 UBAP2LQ14157 1087 aaKnown RBP12.17□□□□□ -0.46
CCDC7-208ENST00000537047 TLR1Q15399 786 aa12.17□□□□□ -0.46
CCDC7-208ENST00000537047 ESCO1Q5FWF5 840 aa12.17□□□□□ -0.46
CCDC7-208ENST00000537047 GNASQ5JWF2 1037 aa12.17□□□□□ -0.46
CCDC7-208ENST00000537047 GPAT2Q6NUI2 795 aa12.17□□□□□ -0.46
CCDC7-208ENST00000537047 PLPP7Q8NBV4 271 aa12.17□□□□□ -0.46
CCDC7-208ENST00000537047 COG6Q9Y2V7 657 aa12.17□□□□□ -0.46
CCDC7-208ENST00000537047 A0A1B0GTH6 734 aa12.16□□□□□ -0.46
CCDC7-208ENST00000537047 MSX1P28360 303 aa12.16□□□□□ -0.46
CCDC7-208ENST00000537047 SEMA3FQ13275 785 aa12.16□□□□□ -0.46
CCDC7-208ENST00000537047 WASHC4Q2M389 1173 aa12.16□□□□□ -0.46
CCDC7-208ENST00000537047 POM121Q96HA1 1249 aa12.16□□□□□ -0.46
CCDC7-208ENST00000537047 GDF10P55107 478 aa12.15□□□□□ -0.46
CCDC7-208ENST00000537047 PPARGC1BQ86YN6 1023 aaKnown RBP12.14□□□□□ -0.47
CCDC7-208ENST00000537047 NEDD1Q8NHV4 660 aa12.14□□□□□ -0.47
CCDC7-208ENST00000537047 INHAP05111 366 aa12.13□□□□□ -0.47
CCDC7-208ENST00000537047 GTF2E1P29083 439 aaPredicted RBP12.13□□□□□ -0.47
CCDC7-208ENST00000537047 RHBDD1Q8TEB9 315 aa12.13□□□□□ -0.47
CCDC7-208ENST00000537047 CFHR5Q9BXR6 569 aa12.13□□□□□ -0.47
CCDC7-208ENST00000537047 PLA2G4AP47712 749 aa12.12□□□□□ -0.47
CCDC7-208ENST00000537047 SERTAD1Q9UHV2 236 aa12.12□□□□□ -0.47
CCDC7-208ENST00000537047 IGHA1P01876 353 aa12.11□□□□□ -0.47
CCDC7-208ENST00000537047 LRRC4BQ9NT99 713 aa12.11□□□□□ -0.47
CCDC7-208ENST00000537047 NSFL1CQ9UNZ2 370 aaKnown RBP12.11□□□□□ -0.47
CCDC7-208ENST00000537047 PHF20L1A8MW92 1017 aa12.1□□□□□ -0.47
CCDC7-208ENST00000537047 TMEM229AB2RXF0 380 aa12.1□□□□□ -0.47
CCDC7-208ENST00000537047 OIP5O43482 229 aa12.1□□□□□ -0.47
CCDC7-208ENST00000537047 FOXK2Q01167 660 aa12.1□□□□□ -0.47
CCDC7-208ENST00000537047 MAP7D1Q3KQU3 841 aa12.1□□□□□ -0.47
CCDC7-208ENST00000537047 BEND7Q8N7W2 519 aaPredicted RBP12.1□□□□□ -0.47
CCDC7-208ENST00000537047 SIRT1Q96EB6 747 aa12.1□□□□□ -0.47
CCDC7-208ENST00000537047 USP3Q9Y6I4 520 aa12.1□□□□□ -0.47
CCDC7-208ENST00000537047 C1orf229Q6ZS94 237 aaPredicted RBP12.09□□□□□ -0.47
CCDC7-208ENST00000537047 ABHD17AQ96GS6 310 aa12.09□□□□□ -0.47
CCDC7-208ENST00000537047 DCAF5Q96JK2 942 aa12.09□□□□□ -0.47
CCDC7-208ENST00000537047 OXCT2Q9BYC2 517 aaPredicted RBP12.09□□□□□ -0.47
CCDC7-208ENST00000537047 CSB-PGBD3P0DP91 1061 aa12.08□□□□□ -0.48
CCDC7-208ENST00000537047 MAP2K3P46734 347 aa12.08□□□□□ -0.48
CCDC7-208ENST00000537047 PGBD3Q8N328 593 aa12.08□□□□□ -0.48
CCDC7-208ENST00000537047 C2CD2LO14523 706 aa12.07□□□□□ -0.48
CCDC7-208ENST00000537047 SMTNP53814 917 aa12.07□□□□□ -0.48
CCDC7-208ENST00000537047 KLRG1Q96E93 195 aa12.07□□□□□ -0.48
CCDC7-208ENST00000537047 ALG2Q9H553 416 aa12.07□□□□□ -0.48
CCDC7-208ENST00000537047 PCDHGA11Q9Y5H2 935 aa12.07□□□□□ -0.48
CCDC7-208ENST00000537047 SHISA8B8ZZ34 492 aa12.06□□□□□ -0.48
CCDC7-208ENST00000537047 BNIP3LO60238 219 aa12.06□□□□□ -0.48
CCDC7-208ENST00000537047 ITGB2P05107 769 aa12.06□□□□□ -0.48
CCDC7-208ENST00000537047 ATP4AP20648 1035 aa12.06□□□□□ -0.48
CCDC7-208ENST00000537047 SOX11P35716 441 aa12.06□□□□□ -0.48
CCDC7-208ENST00000537047 LBRQ14739 615 aaKnown RBP12.06□□□□□ -0.48
CCDC7-208ENST00000537047 PODNQ7Z5L7 613 aa12.06□□□□□ -0.48
CCDC7-208ENST00000537047 ZNF295-AS1Q8N0V1 137 aa12.06□□□□□ -0.48
CCDC7-208ENST00000537047 SKIP12755 728 aa12.05□□□□□ -0.48
CCDC7-208ENST00000537047 PLA2G4EQ3MJ16 856 aa12.05□□□□□ -0.48
CCDC7-208ENST00000537047 TBC1D9Q6ZT07 1266 aa12.05□□□□□ -0.48
CCDC7-208ENST00000537047 AIDAQ96BJ3 306 aa12.05□□□□□ -0.48
CCDC7-208ENST00000537047 NDFIP2Q9NV92 336 aa12.05□□□□□ -0.48
CCDC7-208ENST00000537047 DNAAF2Q9NVR5 837 aaKnown RBP12.05□□□□□ -0.48
CCDC7-208ENST00000537047 PHF24Q9UPV7 400 aa12.05□□□□□ -0.48
CCDC7-208ENST00000537047 CTBSQ01459 385 aa12.04□□□□□ -0.48
CCDC7-208ENST00000537047 EFHC2Q5JST6 749 aa12.04□□□□□ -0.48
CCDC7-208ENST00000537047 CRISPLD1Q9H336 500 aa12.04□□□□□ -0.48
CCDC7-208ENST00000537047 HCN2Q9UL51 889 aa12.04□□□□□ -0.48
CCDC7-208ENST00000537047 POM121CA8CG34 1229 aa12.03□□□□□ -0.48
CCDC7-208ENST00000537047 SNRPNP63162 240 aaKnown RBP12.03□□□□□ -0.48
CCDC7-208ENST00000537047 DEPDC4Q8N2C3 294 aa12.03□□□□□ -0.48
CCDC7-208ENST00000537047 IQSEC3Q9UPP2 1182 aaPredicted RBP12.03□□□□□ -0.48
CCDC7-208ENST00000537047 GALNT6Q8NCL4 622 aa12.02□□□□□ -0.49
CCDC7-208ENST00000537047 ADAMTS19Q8TE59 1207 aa12.02□□□□□ -0.49
CCDC7-208ENST00000537047 SLC4A9Q96Q91 983 aa12.02□□□□□ -0.49
CCDC7-208ENST00000537047 NIFKQ9BYG3 293 aaKnown RBP12.02□□□□□ -0.49
CCDC7-208ENST00000537047 PARP3Q9Y6F1 533 aa12.02□□□□□ -0.49
CCDC7-208ENST00000537047 A6NJY4 79 aa12.01□□□□□ -0.49
CCDC7-208ENST00000537047 FGFR3P22607 806 aa12.01□□□□□ -0.49
CCDC7-208ENST00000537047 NCOA4Q13772 614 aa12.01□□□□□ -0.49
CCDC7-208ENST00000537047 ZCCHC2Q9C0B9 1178 aaKnown RBP12.01□□□□□ -0.49
CCDC7-208ENST00000537047 ATXN7L1Q9ULK2 861 aaPredicted RBP12.01□□□□□ -0.49
CCDC7-208ENST00000537047 BMP4P12644 408 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms