RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 DIP2AQ14689 1571 aa10.54□□□□□ -0.72
YBX3-206ENST00000536823 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.54□□□□□ -0.72
YBX3-206ENST00000536823 SLC26A8Q96RN1 970 aa10.54□□□□□ -0.72
YBX3-206ENST00000536823 NKTRP30414 1462 aaKnown RBP10.54□□□□□ -0.72
YBX3-206ENST00000536823 H3BM21 787 aa10.53□□□□□ -0.72
YBX3-206ENST00000536823 TOM1O60784 492 aa10.53□□□□□ -0.72
YBX3-206ENST00000536823 RC3H1Q5TC82 1133 aaKnown RBP10.53□□□□□ -0.72
YBX3-206ENST00000536823 TRIM52Q96A61 297 aa10.53□□□□□ -0.72
YBX3-206ENST00000536823 XIRP1Q702N8 1843 aaKnown RBP10.53□□□□□ -0.72
YBX3-206ENST00000536823 BMP1P13497 986 aa10.52□□□□□ -0.73
YBX3-206ENST00000536823 KCNA6P17658 529 aa10.52□□□□□ -0.73
YBX3-206ENST00000536823 MMP16P51512 607 aa10.52□□□□□ -0.73
YBX3-206ENST00000536823 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
YBX3-206ENST00000536823 ADAMTS13Q76LX8 1427 aa10.51□□□□□ -0.73
YBX3-206ENST00000536823 HIC1Q14526 733 aa10.51□□□□□ -0.73
YBX3-206ENST00000536823 SULF1Q8IWU6 871 aa10.51□□□□□ -0.73
YBX3-206ENST00000536823 ERBB4Q15303 1308 aa10.51□□□□□ -0.73
YBX3-206ENST00000536823 CHD2O14647 1828 aaKnown RBP10.5□□□□□ -0.73
YBX3-206ENST00000536823 KIF1BO60333 1816 aa10.5□□□□□ -0.73
YBX3-206ENST00000536823 ALDH1A1P00352 501 aa10.5□□□□□ -0.73
YBX3-206ENST00000536823 GRIPAP1Q4V328 841 aa10.5□□□□□ -0.73
YBX3-206ENST00000536823 TBX22Q9Y458 520 aa10.5□□□□□ -0.73
YBX3-206ENST00000536823 SETBP1Q9Y6X0 1596 aa10.5□□□□□ -0.73
YBX3-206ENST00000536823 TMEM94Q12767 1356 aa10.5□□□□□ -0.73
YBX3-206ENST00000536823 NEXMIFQ5QGS0 1516 aa10.49□□□□□ -0.73
YBX3-206ENST00000536823 NRXN3Q9Y4C0 1643 aa10.49□□□□□ -0.73
YBX3-206ENST00000536823 PIP4K2BP78356 416 aa10.49□□□□□ -0.73
YBX3-206ENST00000536823 SKOR1P84550 965 aa10.49□□□□□ -0.73
YBX3-206ENST00000536823 Q3C1V9 767 aa10.49□□□□□ -0.73
YBX3-206ENST00000536823 NUTM2DQ5VT03 806 aaPredicted RBP10.49□□□□□ -0.73
YBX3-206ENST00000536823 TRIM46Q7Z4K8 759 aa10.49□□□□□ -0.73
YBX3-206ENST00000536823 NLRP7Q8WX94 980 aa10.49□□□□□ -0.73
YBX3-206ENST00000536823 PIK3R4Q99570 1358 aa10.49□□□□□ -0.73
YBX3-206ENST00000536823 SETD5Q9C0A6 1442 aa10.49□□□□□ -0.73
YBX3-206ENST00000536823 WNT7BP56706 349 aa10.48□□□□□ -0.73
YBX3-206ENST00000536823 ZNF326Q5BKZ1 582 aaKnown RBP10.47□□□□□ -0.73
YBX3-206ENST00000536823 PROSER2Q86WR7 435 aaPredicted RBP10.47□□□□□ -0.73
YBX3-206ENST00000536823 CCDC24Q8N4L8 307 aa10.47□□□□□ -0.73
YBX3-206ENST00000536823 ACIN1Q9UKV3 1341 aaKnown RBP10.47□□□□□ -0.73
YBX3-206ENST00000536823 CAPN5O15484 640 aaPredicted RBP10.46□□□□□ -0.73
YBX3-206ENST00000536823 DXOO77932 396 aaKnown RBP10.46□□□□□ -0.73
YBX3-206ENST00000536823 HSPA1LP34931 641 aa10.46□□□□□ -0.73
YBX3-206ENST00000536823 XRN1Q8IZH2 1706 aaKnown RBP10.45□□□□□ -0.74
YBX3-206ENST00000536823 PTPRUQ92729 1446 aa10.45□□□□□ -0.74
YBX3-206ENST00000536823 NCOA3Q9Y6Q9 1424 aa10.45□□□□□ -0.74
YBX3-206ENST00000536823 CCDC144AA2RUR9 1427 aa10.44□□□□□ -0.74
YBX3-206ENST00000536823 MSH6P52701 1360 aa10.44□□□□□ -0.74
YBX3-206ENST00000536823 RAB3GAP2Q9H2M9 1393 aa10.44□□□□□ -0.74
YBX3-206ENST00000536823 MPHOSPH9Q99550 1183 aa10.44□□□□□ -0.74
YBX3-206ENST00000536823 USB1Q9BQ65 265 aaKnown RBP10.44□□□□□ -0.74
YBX3-206ENST00000536823 PPLO60437 1756 aa10.44□□□□□ -0.74
YBX3-206ENST00000536823 RPGRIP1LQ68CZ1 1315 aa10.43□□□□□ -0.74
YBX3-206ENST00000536823 FAM135BQ49AJ0 1406 aa10.42□□□□□ -0.74
YBX3-206ENST00000536823 SPATA31E1Q6ZUB1 1445 aa10.42□□□□□ -0.74
YBX3-206ENST00000536823 DISP3Q9P2K9 1392 aa10.42□□□□□ -0.74
YBX3-206ENST00000536823 KCTD17Q8N5Z5 321 aa10.42□□□□□ -0.74
YBX3-206ENST00000536823 WASF2Q9Y6W5 498 aa10.42□□□□□ -0.74
YBX3-206ENST00000536823 SETD1AO15047 1707 aaKnown RBP10.41□□□□□ -0.74
YBX3-206ENST00000536823 METP08581 1390 aa10.41□□□□□ -0.74
YBX3-206ENST00000536823 AMOTL2Q9Y2J4 779 aa10.41□□□□□ -0.74
YBX3-206ENST00000536823 ROBO1Q9Y6N7 1651 aa10.41□□□□□ -0.74
YBX3-206ENST00000536823 MED1Q15648 1581 aaPredicted RBP10.4□□□□□ -0.74
YBX3-206ENST00000536823 GNPATO15228 680 aa10.4□□□□□ -0.74
YBX3-206ENST00000536823 DCCP43146 1447 aa10.4□□□□□ -0.75
YBX3-206ENST00000536823 PRAG1Q86YV5 1406 aa10.4□□□□□ -0.75
YBX3-206ENST00000536823 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.39□□□□□ -0.75
YBX3-206ENST00000536823 IFT172Q9UG01 1749 aa10.39□□□□□ -0.75
YBX3-206ENST00000536823 KCNMA1Q12791 1236 aa10.39□□□□□ -0.75
YBX3-206ENST00000536823 EHBP1Q8NDI1 1231 aa10.39□□□□□ -0.75
YBX3-206ENST00000536823 ZFP42Q96MM3 310 aa10.39□□□□□ -0.75
YBX3-206ENST00000536823 PTCH1Q13635 1447 aa10.39□□□□□ -0.75
YBX3-206ENST00000536823 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
YBX3-206ENST00000536823 SEMA3EO15041 775 aa10.38□□□□□ -0.75
YBX3-206ENST00000536823 SIAH2O43255 324 aa10.38□□□□□ -0.75
YBX3-206ENST00000536823 C14orf37Q86TY3 774 aa10.38□□□□□ -0.75
YBX3-206ENST00000536823 HRCP23327 699 aa10.37□□□□□ -0.75
YBX3-206ENST00000536823 C19orf44Q9H6X5 657 aa10.37□□□□□ -0.75
YBX3-206ENST00000536823 ADGRL3Q9HAR2 1447 aa10.37□□□□□ -0.75
YBX3-206ENST00000536823 SLAIN2Q9P270 581 aa10.37□□□□□ -0.75
YBX3-206ENST00000536823 NALCNQ8IZF0 1738 aa10.36□□□□□ -0.75
YBX3-206ENST00000536823 ADGRF5Q8IZF2 1346 aa10.35□□□□□ -0.75
YBX3-206ENST00000536823 PIK3C2GO75747 1445 aa10.35□□□□□ -0.75
YBX3-206ENST00000536823 ATF3P18847 181 aa10.35□□□□□ -0.75
YBX3-206ENST00000536823 RGL3Q3MIN7 710 aa10.35□□□□□ -0.75
YBX3-206ENST00000536823 PHOX2BQ99453 314 aa10.35□□□□□ -0.75
YBX3-206ENST00000536823 MYOM2P54296 1465 aa10.35□□□□□ -0.75
YBX3-206ENST00000536823 ASXL1Q8IXJ9 1541 aa10.34□□□□□ -0.75
YBX3-206ENST00000536823 AHDC1Q5TGY3 1603 aaPredicted RBP10.34□□□□□ -0.75
YBX3-206ENST00000536823 PHLPP1O60346 1717 aa10.34□□□□□ -0.75
YBX3-206ENST00000536823 VSIG8P0DPA2 414 aa10.34□□□□□ -0.75
YBX3-206ENST00000536823 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
YBX3-206ENST00000536823 TPRNQ4KMQ1 711 aa10.34□□□□□ -0.75
YBX3-206ENST00000536823 RBM26Q5T8P6 1007 aaKnown RBP10.34□□□□□ -0.75
YBX3-206ENST00000536823 ROBO2Q9HCK4 1378 aa10.34□□□□□ -0.75
YBX3-206ENST00000536823 NRXN1Q9ULB1 1477 aa10.34□□□□□ -0.75
YBX3-206ENST00000536823 MST1RQ04912 1400 aa10.33□□□□□ -0.76
YBX3-206ENST00000536823 COL16A1Q07092 1604 aaPredicted RBP10.33□□□□□ -0.76
YBX3-206ENST00000536823 GSK3AP49840 483 aa10.33□□□□□ -0.76
YBX3-206ENST00000536823 TECPR2O15040 1411 aa10.33□□□□□ -0.76
YBX3-206ENST00000536823 ILDR2Q71H61 639 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 216.9 ms