RNA–Protein interactions for RNA: ENST00000536821.5

TMED3-203, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2 BASIC

Gene TMED3, Length 2,265 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-203ENST00000536821 RGS3P49796 1198 aa21.45■■□□□ 1.02
TMED3-203ENST00000536821 ZBTB40Q9NUA8 1239 aa21.45■■□□□ 1.02
TMED3-203ENST00000536821 RAPGEF4Q8WZA2 1011 aa21.43■■□□□ 1.02
TMED3-203ENST00000536821 NHSL1Q5SYE7 1610 aa21.43■■□□□ 1.02
TMED3-203ENST00000536821 MPRIPQ6WCQ1 1025 aa21.43■■□□□ 1.02
TMED3-203ENST00000536821 FAM208AQ9UK61 1670 aaKnown RBP21.42■■□□□ 1.02
TMED3-203ENST00000536821 SLC4A2P04920 1241 aa21.41■■□□□ 1.02
TMED3-203ENST00000536821 CHMP4BQ9H444 224 aaKnown RBP21.41■■□□□ 1.02
TMED3-203ENST00000536821 TEFQ10587 303 aa21.41■■□□□ 1.02
TMED3-203ENST00000536821 PTPRCP08575 1304 aa21.4■■□□□ 1.02
TMED3-203ENST00000536821 ZBTB7BO15156 539 aaPredicted RBP21.4■■□□□ 1.02
TMED3-203ENST00000536821 RNMTO43148 476 aaKnown RBP21.4■■□□□ 1.02
TMED3-203ENST00000536821 SOS1Q07889 1333 aaPredicted RBP21.4■■□□□ 1.02
TMED3-203ENST00000536821 TATP17735 454 aaPredicted RBP21.4■■□□□ 1.02
TMED3-203ENST00000536821 PRDM11Q9NQV5 511 aa21.4■■□□□ 1.02
TMED3-203ENST00000536821 ANTXR1Q9H6X2 564 aa21.39■■□□□ 1.02
TMED3-203ENST00000536821 OVOS2A0A0G2JMS6 1433 aa21.38■■□□□ 1.01
TMED3-203ENST00000536821 HDAC1Q13547 482 aaPredicted RBP21.38■■□□□ 1.01
TMED3-203ENST00000536821 STK31Q9BXU1 1019 aa21.38■■□□□ 1.01
TMED3-203ENST00000536821 RGS12O14924 1447 aa21.38■■□□□ 1.01
TMED3-203ENST00000536821 CCDC30Q5VVM6 783 aa21.38■■□□□ 1.01
TMED3-203ENST00000536821 ABCA3Q99758 1704 aa21.37■■□□□ 1.01
TMED3-203ENST00000536821 MEGF6O75095 1541 aa21.37■■□□□ 1.01
TMED3-203ENST00000536821 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
TMED3-203ENST00000536821 EIF5BO60841 1220 aaKnown RBP21.36■■□□□ 1.01
TMED3-203ENST00000536821 BTBD11A6QL63 1104 aa21.36■■□□□ 1.01
TMED3-203ENST00000536821 INTS3Q68E01 1043 aaKnown RBP21.36■■□□□ 1.01
TMED3-203ENST00000536821 SPG7Q9UQ90 795 aa21.36■■□□□ 1.01
TMED3-203ENST00000536821 EIF4A1P60842 406 aaKnown RBP21.35■■□□□ 1.01
TMED3-203ENST00000536821 G2E3Q7L622 706 aa21.35■■□□□ 1.01
TMED3-203ENST00000536821 NECTIN2Q92692 538 aa21.35■■□□□ 1.01
TMED3-203ENST00000536821 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.35■■□□□ 1.01
TMED3-203ENST00000536821 PDZRN3Q9UPQ7 1066 aa21.34■■□□□ 1.01
TMED3-203ENST00000536821 KCNQ3O43525 872 aa21.33■■□□□ 1.01
TMED3-203ENST00000536821 WDR17Q8IZU2 1322 aa21.33■■□□□ 1
TMED3-203ENST00000536821 PLEKHG2Q9H7P9 1386 aa21.33■■□□□ 1
TMED3-203ENST00000536821 ADAMTS7Q9UKP4 1686 aa21.33■■□□□ 1
TMED3-203ENST00000536821 HDGFL1Q5TGJ6 251 aa21.32■■□□□ 1
TMED3-203ENST00000536821 C1orf115Q9H7X2 142 aa21.32■■□□□ 1
TMED3-203ENST00000536821 PHKG2P15735 406 aa21.31■■□□□ 1
TMED3-203ENST00000536821 LTBP4Q8N2S1 1624 aa21.31■■□□□ 1
TMED3-203ENST00000536821 TBC1D32Q96NH3 1257 aa21.31■■□□□ 1
TMED3-203ENST00000536821 COL5A2P05997 1499 aaPredicted RBP21.31■■□□□ 1
TMED3-203ENST00000536821 ROBO1Q9Y6N7 1651 aa21.3■■□□□ 1
TMED3-203ENST00000536821 HOXB7P09629 217 aa21.3■■□□□ 1
TMED3-203ENST00000536821 TOM1L2Q6ZVM7 507 aa21.3■■□□□ 1
TMED3-203ENST00000536821 IFNL2Q8IZJ0 200 aa21.3■■□□□ 1
TMED3-203ENST00000536821 UPF2Q9HAU5 1272 aaKnown RBP21.3■■□□□ 1
TMED3-203ENST00000536821 SIPA1L3O60292 1781 aaPredicted RBP21.3■■□□□ 1
TMED3-203ENST00000536821 FLIIQ13045 1269 aa21.3■■□□□ 1
TMED3-203ENST00000536821 CACNA1FO60840 1977 aa21.29■■□□□ 1
TMED3-203ENST00000536821 FSD2A1L4K1 749 aa21.29■■□□□ 1
TMED3-203ENST00000536821 SEC24BO95487 1268 aa21.29■■□□□ 1
TMED3-203ENST00000536821 SMC5Q8IY18 1101 aa21.29■■□□□ 1
TMED3-203ENST00000536821 PKD1L3Q7Z443 1732 aa21.28■■□□□ 1
TMED3-203ENST00000536821 KDM6AO15550 1401 aaPredicted RBP21.28■■□□□ 1
TMED3-203ENST00000536821 F6X3S4 739 aa21.28■■□□□ 1
TMED3-203ENST00000536821 SCN11AQ9UI33 1791 aa21.28■■□□□ 1
TMED3-203ENST00000536821 EIF2S2P20042 333 aaKnown RBP21.27■■□□□ 1
TMED3-203ENST00000536821 FKBP5Q13451 457 aaPredicted RBP21.27■■□□□ 1
TMED3-203ENST00000536821 SLC4A10Q6U841 1118 aa21.27■■□□□ 1
TMED3-203ENST00000536821 CHMP4AQ9BY43 222 aa21.27■■□□□ 1
TMED3-203ENST00000536821 RRAGDQ9NQL2 400 aaPredicted RBP21.27■■□□□ 1
TMED3-203ENST00000536821 CYP27B1O15528 508 aa21.26■□□□□ 0.99
TMED3-203ENST00000536821 CCT4P50991 539 aaKnown RBP21.26■□□□□ 0.99
TMED3-203ENST00000536821 SLC52A2Q9HAB3 445 aa21.26■□□□□ 0.99
TMED3-203ENST00000536821 EVA1CP58658 441 aa21.25■□□□□ 0.99
TMED3-203ENST00000536821 STRN4Q9NRL3 753 aa21.25■□□□□ 0.99
TMED3-203ENST00000536821 AHDC1Q5TGY3 1603 aaPredicted RBP21.25■□□□□ 0.99
TMED3-203ENST00000536821 PARP4Q9UKK3 1724 aaKnown RBP21.25■□□□□ 0.99
TMED3-203ENST00000536821 SIRT2Q8IXJ6 389 aa21.24■□□□□ 0.99
TMED3-203ENST00000536821 DCAF5Q96JK2 942 aa21.24■□□□□ 0.99
TMED3-203ENST00000536821 CARD10Q9BWT7 1032 aa21.24■□□□□ 0.99
TMED3-203ENST00000536821 HSP90AB1P08238 724 aaKnown RBP21.24■□□□□ 0.99
TMED3-203ENST00000536821 LARP1Q6PKG0 1096 aaKnown RBP21.23■□□□□ 0.99
TMED3-203ENST00000536821 MEIS3Q99687 375 aa21.23■□□□□ 0.99
TMED3-203ENST00000536821 TBC1D2Q9BYX2 928 aa21.23■□□□□ 0.99
TMED3-203ENST00000536821 HEG1Q9ULI3 1381 aa21.23■□□□□ 0.99
TMED3-203ENST00000536821 GIGYF1O75420 1035 aaPredicted RBP21.22■□□□□ 0.99
TMED3-203ENST00000536821 NFATC2IPQ8NCF5 419 aa21.22■□□□□ 0.99
TMED3-203ENST00000536821 SLKQ9H2G2 1235 aaPredicted RBP21.22■□□□□ 0.99
TMED3-203ENST00000536821 PHAXQ9H814 394 aaKnown RBP21.22■□□□□ 0.99
TMED3-203ENST00000536821 CHPF2Q9P2E5 772 aa21.22■□□□□ 0.99
TMED3-203ENST00000536821 ISY1Q9ULR0 285 aaKnown RBP21.22■□□□□ 0.99
TMED3-203ENST00000536821 CLCN1P35523 988 aa21.22■□□□□ 0.99
TMED3-203ENST00000536821 GOLGA6L3A6NEY3 463 aa21.21■□□□□ 0.99
TMED3-203ENST00000536821 ZCRB1Q8TBF4 217 aaKnown RBP21.21■□□□□ 0.99
TMED3-203ENST00000536821 GCC1Q96CN9 775 aa21.21■□□□□ 0.99
TMED3-203ENST00000536821 ZNF790Q6PG37 636 aa21.21■□□□□ 0.99
TMED3-203ENST00000536821 IL2RBP14784 551 aa21.2■□□□□ 0.98
TMED3-203ENST00000536821 NUCB1Q02818 461 aa21.2■□□□□ 0.98
TMED3-203ENST00000536821 XRCC6P12956 609 aaKnown RBP eCLIP21.2■□□□□ 0.98
TMED3-203ENST00000536821 MCM4P33991 863 aa21.2■□□□□ 0.98
TMED3-203ENST00000536821 SLC39A6Q13433 755 aa21.2■□□□□ 0.98
TMED3-203ENST00000536821 MRC1P22897 1456 aa21.19■□□□□ 0.98
TMED3-203ENST00000536821 PCDH11XQ9BZA7 1347 aa21.19■□□□□ 0.98
TMED3-203ENST00000536821 PCDH11YQ9BZA8 1340 aa21.19■□□□□ 0.98
TMED3-203ENST00000536821 ATP10DQ9P241 1426 aa21.19■□□□□ 0.98
TMED3-203ENST00000536821 RPAP2Q8IXW5 612 aaPredicted RBP21.18■□□□□ 0.98
TMED3-203ENST00000536821 ANKRD44Q8N8A2 993 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms