RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 CCNL1Q9UK58 526 aaPredicted RBP14.94□□□□□ -0.02
CHRNB1-202ENST00000536404 PNPLA7Q6ZV29 1317 aa14.93□□□□□ -0.02
CHRNB1-202ENST00000536404 PCDH11XQ9BZA7 1347 aa14.93□□□□□ -0.02
CHRNB1-202ENST00000536404 PCDH11YQ9BZA8 1340 aa14.93□□□□□ -0.02
CHRNB1-202ENST00000536404 DCAF8L1A6NGE4 600 aa14.93□□□□□ -0.02
CHRNB1-202ENST00000536404 SYT17Q9BSW7 474 aa14.93□□□□□ -0.02
CHRNB1-202ENST00000536404 RTN4Q9NQC3 1192 aaKnown RBP14.93□□□□□ -0.02
CHRNB1-202ENST00000536404 TFCP2L1Q9NZI6 479 aa14.93□□□□□ -0.02
CHRNB1-202ENST00000536404 LY75O60449 1722 aa14.93□□□□□ -0.02
CHRNB1-202ENST00000536404 YY1P25490 414 aa14.92□□□□□ -0.02
CHRNB1-202ENST00000536404 ARXQ96QS3 562 aa14.92□□□□□ -0.02
CHRNB1-202ENST00000536404 MPRIPQ6WCQ1 1025 aa14.92□□□□□ -0.02
CHRNB1-202ENST00000536404 NCAPD2Q15021 1401 aa14.91□□□□□ -0.02
CHRNB1-202ENST00000536404 ANKRD26Q9UPS8 1709 aa14.91□□□□□ -0.02
CHRNB1-202ENST00000536404 EIF4A2Q14240 407 aaKnown RBP14.91□□□□□ -0.02
CHRNB1-202ENST00000536404 SLC16A10Q8TF71 515 aa14.9□□□□□ -0.02
CHRNB1-202ENST00000536404 TUBGCP6Q96RT7 1819 aa14.9□□□□□ -0.02
CHRNB1-202ENST00000536404 CENPQQ7L2Z9 268 aaPredicted RBP14.89□□□□□ -0.03
CHRNB1-202ENST00000536404 NPM2Q86SE8 214 aaKnown RBP14.89□□□□□ -0.03
CHRNB1-202ENST00000536404 SPG7Q9UQ90 795 aa14.89□□□□□ -0.03
CHRNB1-202ENST00000536404 QSER1Q2KHR3 1735 aa14.89□□□□□ -0.03
CHRNB1-202ENST00000536404 NEFMP07197 916 aa14.88□□□□□ -0.03
CHRNB1-202ENST00000536404 NKX1-1Q15270 411 aaPredicted RBP14.88□□□□□ -0.03
CHRNB1-202ENST00000536404 COL23A1Q86Y22 540 aaPredicted RBP14.88□□□□□ -0.03
CHRNB1-202ENST00000536404 PIGBQ92521 554 aa14.88□□□□□ -0.03
CHRNB1-202ENST00000536404 PKD1L3Q7Z443 1732 aa14.88□□□□□ -0.03
CHRNB1-202ENST00000536404 TOGARAM1Q9Y4F4 1720 aa14.88□□□□□ -0.03
CHRNB1-202ENST00000536404 PALLDQ8WX93 1383 aa14.88□□□□□ -0.03
CHRNB1-202ENST00000536404 FAM43AQ8N2R8 423 aa14.87□□□□□ -0.03
CHRNB1-202ENST00000536404 NGEFQ8N5V2 710 aa14.87□□□□□ -0.03
CHRNB1-202ENST00000536404 ITGB4P16144 1822 aa14.87□□□□□ -0.03
CHRNB1-202ENST00000536404 POLD1P28340 1107 aa14.86□□□□□ -0.03
CHRNB1-202ENST00000536404 KLHL34Q8N239 644 aa14.86□□□□□ -0.03
CHRNB1-202ENST00000536404 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.86□□□□□ -0.03
CHRNB1-202ENST00000536404 PHKG2P15735 406 aa14.85□□□□□ -0.03
CHRNB1-202ENST00000536404 MORC1Q86VD1 984 aa14.85□□□□□ -0.03
CHRNB1-202ENST00000536404 WDR43Q15061 677 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHRNB1-202ENST00000536404 IFNL2Q8IZJ0 200 aa14.84□□□□□ -0.03
CHRNB1-202ENST00000536404 SMARCC1Q92922 1105 aaPredicted RBP14.84□□□□□ -0.03
CHRNB1-202ENST00000536404 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
CHRNB1-202ENST00000536404 MAP3K5Q99683 1374 aa14.84□□□□□ -0.03
CHRNB1-202ENST00000536404 COL24A1Q17RW2 1714 aa14.84□□□□□ -0.03
CHRNB1-202ENST00000536404 MSL1Q68DK7 614 aa14.84□□□□□ -0.03
CHRNB1-202ENST00000536404 SMIM5Q71RC9 77 aa14.84□□□□□ -0.03
CHRNB1-202ENST00000536404 IGSF1Q8N6C5 1336 aa14.84□□□□□ -0.03
CHRNB1-202ENST00000536404 NPC1L1Q9UHC9 1359 aa14.83□□□□□ -0.03
CHRNB1-202ENST00000536404 AMIGO3Q86WK7 504 aa14.83□□□□□ -0.04
CHRNB1-202ENST00000536404 ASAP1Q9ULH1 1129 aa14.83□□□□□ -0.04
CHRNB1-202ENST00000536404 KNSTRNQ9Y448 316 aa14.83□□□□□ -0.04
CHRNB1-202ENST00000536404 C5P01031 1676 aa14.82□□□□□ -0.04
CHRNB1-202ENST00000536404 TAF1LQ8IZX4 1826 aa14.82□□□□□ -0.04
CHRNB1-202ENST00000536404 CC2D1BQ5T0F9 858 aaKnown RBP14.82□□□□□ -0.04
CHRNB1-202ENST00000536404 CDCA7LQ96GN5 454 aa14.82□□□□□ -0.04
CHRNB1-202ENST00000536404 TMOD3Q9NYL9 352 aa14.82□□□□□ -0.04
CHRNB1-202ENST00000536404 NLGN2Q8NFZ4 835 aa14.81□□□□□ -0.04
CHRNB1-202ENST00000536404 LOC102724428A0A0B4J2F2 783 aa14.81□□□□□ -0.04
CHRNB1-202ENST00000536404 SIK1P57059 783 aa14.81□□□□□ -0.04
CHRNB1-202ENST00000536404 GOLGA2Q08379 1002 aa14.81□□□□□ -0.04
CHRNB1-202ENST00000536404 FAM161AQ3B820 660 aa14.81□□□□□ -0.04
CHRNB1-202ENST00000536404 AEBP1Q8IUX7 1158 aa14.81□□□□□ -0.04
CHRNB1-202ENST00000536404 LINC00116Q8NCU8 138 aa14.81□□□□□ -0.04
CHRNB1-202ENST00000536404 KDM2BQ8NHM5 1336 aa14.81□□□□□ -0.04
CHRNB1-202ENST00000536404 ZMYND15Q9H091 742 aa14.81□□□□□ -0.04
CHRNB1-202ENST00000536404 ATG3Q9NT62 314 aa14.81□□□□□ -0.04
CHRNB1-202ENST00000536404 GPR162Q16538 588 aa14.8□□□□□ -0.04
CHRNB1-202ENST00000536404 PLEKHO1Q53GL0 409 aaPredicted RBP14.8□□□□□ -0.04
CHRNB1-202ENST00000536404 AMER1Q5JTC6 1135 aaPredicted RBP14.8□□□□□ -0.04
CHRNB1-202ENST00000536404 AK7Q96M32 723 aa14.8□□□□□ -0.04
CHRNB1-202ENST00000536404 C4BP0C0L5 1744 aa14.79□□□□□ -0.04
CHRNB1-202ENST00000536404 ITPK1Q13572 414 aa14.79□□□□□ -0.04
CHRNB1-202ENST00000536404 FLAD1Q8NFF5 587 aa14.79□□□□□ -0.04
CHRNB1-202ENST00000536404 PHF14O94880 888 aa14.78□□□□□ -0.04
CHRNB1-202ENST00000536404 HMGB2P26583 209 aaKnown RBP14.78□□□□□ -0.04
CHRNB1-202ENST00000536404 ZNF530Q6P9A1 599 aaPredicted RBP14.78□□□□□ -0.04
CHRNB1-202ENST00000536404 LAS1LQ9Y4W2 734 aaKnown RBP14.78□□□□□ -0.04
CHRNB1-202ENST00000536404 UTRNP46939 3433 aa14.78□□□□□ -0.04
CHRNB1-202ENST00000536404 IL13P35225 146 aa14.77□□□□□ -0.04
CHRNB1-202ENST00000536404 ATP6V1AP38606 617 aa14.77□□□□□ -0.04
CHRNB1-202ENST00000536404 SULT6B1Q6IMI4 303 aa14.77□□□□□ -0.04
CHRNB1-202ENST00000536404 SENP3-EIF4A1A0A087X0R7 540 aa14.77□□□□□ -0.05
CHRNB1-202ENST00000536404 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.77□□□□□ -0.05
CHRNB1-202ENST00000536404 PPP2R1AP30153 589 aa14.77□□□□□ -0.05
CHRNB1-202ENST00000536404 ADAMTS8Q9UP79 889 aa14.77□□□□□ -0.05
CHRNB1-202ENST00000536404 ZNF521Q96K83 1311 aa14.76□□□□□ -0.05
CHRNB1-202ENST00000536404 ERVV-2B6SEH9 535 aa14.76□□□□□ -0.05
CHRNB1-202ENST00000536404 PLIN1O60240 522 aa14.76□□□□□ -0.05
CHRNB1-202ENST00000536404 GSE1Q14687 1217 aa14.76□□□□□ -0.05
CHRNB1-202ENST00000536404 AMOTQ4VCS5 1084 aa14.76□□□□□ -0.05
CHRNB1-202ENST00000536404 DUSP27Q5VZP5 1158 aa14.76□□□□□ -0.05
CHRNB1-202ENST00000536404 DCAF5Q96JK2 942 aa14.76□□□□□ -0.05
CHRNB1-202ENST00000536404 SLC4A9Q96Q91 983 aa14.76□□□□□ -0.05
CHRNB1-202ENST00000536404 PLEKHG2Q9H7P9 1386 aa14.75□□□□□ -0.05
CHRNB1-202ENST00000536404 UBR3Q6ZT12 1888 aa14.75□□□□□ -0.05
CHRNB1-202ENST00000536404 RRP9O43818 475 aaKnown RBP14.75□□□□□ -0.05
CHRNB1-202ENST00000536404 HSP90AB1P08238 724 aaKnown RBP14.75□□□□□ -0.05
CHRNB1-202ENST00000536404 VSIG10Q8N0Z9 540 aa14.75□□□□□ -0.05
CHRNB1-202ENST00000536404 ZNF784Q8NCA9 323 aaPredicted RBP14.75□□□□□ -0.05
CHRNB1-202ENST00000536404 CHD4Q14839 1912 aa14.74□□□□□ -0.05
CHRNB1-202ENST00000536404 MTHFSP49914 203 aa14.74□□□□□ -0.05
CHRNB1-202ENST00000536404 AAMPQ13685 434 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms