RNA–Protein interactions for RNA: ENST00000536344.5

TRIM3-214, Transcript of tripartite motif containing 3, humanhuman

TSL 2 BASIC

Gene TRIM3, Length 2,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-214ENST00000536344 XIRP1Q702N8 1843 aaKnown RBP26.65■■□□□ 1.86
TRIM3-214ENST00000536344 CSB-PGBD3P0DP91 1061 aa26.65■■□□□ 1.86
TRIM3-214ENST00000536344 F6X3S4 739 aa26.64■■□□□ 1.86
TRIM3-214ENST00000536344 KCNQ3O43525 872 aa26.64■■□□□ 1.86
TRIM3-214ENST00000536344 SLAIN2Q9P270 581 aa26.64■■□□□ 1.86
TRIM3-214ENST00000536344 KIF1AQ12756 1690 aa26.63■■□□□ 1.85
TRIM3-214ENST00000536344 SLIT3O75094 1523 aa26.63■■□□□ 1.85
TRIM3-214ENST00000536344 ZBTB7BO15156 539 aaPredicted RBP26.63■■□□□ 1.85
TRIM3-214ENST00000536344 UPF2Q9HAU5 1272 aaKnown RBP26.63■■□□□ 1.85
TRIM3-214ENST00000536344 BRPF1P55201 1214 aaPredicted RBP26.62■■□□□ 1.85
TRIM3-214ENST00000536344 TAF7Q15545 349 aaPredicted RBP26.62■■□□□ 1.85
TRIM3-214ENST00000536344 SLC4A10Q6U841 1118 aa26.62■■□□□ 1.85
TRIM3-214ENST00000536344 GAS2L3Q86XJ1 694 aa26.61■■□□□ 1.85
TRIM3-214ENST00000536344 ERBB3P21860 1342 aa26.61■■□□□ 1.85
TRIM3-214ENST00000536344 PXDNQ92626 1479 aa26.6■■□□□ 1.85
TRIM3-214ENST00000536344 ABCC4O15439 1325 aa26.6■■□□□ 1.85
TRIM3-214ENST00000536344 ARHGAP45Q92619 1136 aa26.59■■□□□ 1.85
TRIM3-214ENST00000536344 ALS2Q96Q42 1657 aa26.59■■□□□ 1.85
TRIM3-214ENST00000536344 EIF2S2P20042 333 aaKnown RBP26.59■■□□□ 1.85
TRIM3-214ENST00000536344 DCCP43146 1447 aa26.59■■□□□ 1.85
TRIM3-214ENST00000536344 SPATA31A3Q5VYP0 1347 aa26.59■■□□□ 1.85
TRIM3-214ENST00000536344 KIAA0232Q92628 1395 aa26.58■■□□□ 1.85
TRIM3-214ENST00000536344 PLEKHO1Q53GL0 409 aaPredicted RBP26.58■■□□□ 1.85
TRIM3-214ENST00000536344 API5Q9BZZ5 524 aaKnown RBP26.58■■□□□ 1.85
TRIM3-214ENST00000536344 HTATSF1O43719 755 aaKnown RBP26.57■■□□□ 1.84
TRIM3-214ENST00000536344 HAP1P54257 671 aaPredicted RBP26.57■■□□□ 1.84
TRIM3-214ENST00000536344 PODXL2Q9NZ53 605 aa26.57■■□□□ 1.84
TRIM3-214ENST00000536344 TNS3Q68CZ2 1445 aa26.56■■□□□ 1.84
TRIM3-214ENST00000536344 TEFQ10587 303 aa26.56■■□□□ 1.84
TRIM3-214ENST00000536344 AAMPQ13685 434 aa26.56■■□□□ 1.84
TRIM3-214ENST00000536344 C1orf141Q5JVX7 400 aa26.56■■□□□ 1.84
TRIM3-214ENST00000536344 TRIM44Q96DX7 344 aaPredicted RBP26.56■■□□□ 1.84
TRIM3-214ENST00000536344 CHMP5Q9NZZ3 219 aa26.56■■□□□ 1.84
TRIM3-214ENST00000536344 ANXA1P04083 346 aa26.54■■□□□ 1.84
TRIM3-214ENST00000536344 KIAA1211Q6ZU35 1233 aa26.53■■□□□ 1.84
TRIM3-214ENST00000536344 MFAP1P55081 439 aaKnown RBP26.53■■□□□ 1.84
TRIM3-214ENST00000536344 RBM10P98175 930 aaKnown RBP26.53■■□□□ 1.84
TRIM3-214ENST00000536344 AKAP4Q5JQC9 854 aa26.53■■□□□ 1.84
TRIM3-214ENST00000536344 NCOA3Q9Y6Q9 1424 aa26.52■■□□□ 1.84
TRIM3-214ENST00000536344 SIRT2Q8IXJ6 389 aa26.52■■□□□ 1.84
TRIM3-214ENST00000536344 STK31Q9BXU1 1019 aa26.52■■□□□ 1.84
TRIM3-214ENST00000536344 LNPKQ9C0E8 428 aa26.52■■□□□ 1.84
TRIM3-214ENST00000536344 BTBD11A6QL63 1104 aa26.52■■□□□ 1.84
TRIM3-214ENST00000536344 RAPGEF4Q8WZA2 1011 aa26.52■■□□□ 1.84
TRIM3-214ENST00000536344 RGS12O14924 1447 aa26.52■■□□□ 1.84
TRIM3-214ENST00000536344 HDAC1Q13547 482 aaPredicted RBP26.52■■□□□ 1.84
TRIM3-214ENST00000536344 FKBP5Q13451 457 aaPredicted RBP26.51■■□□□ 1.83
TRIM3-214ENST00000536344 PDCL3Q9H2J4 239 aa26.51■■□□□ 1.83
TRIM3-214ENST00000536344 MEIS3Q99687 375 aa26.51■■□□□ 1.83
TRIM3-214ENST00000536344 PHAXQ9H814 394 aaKnown RBP26.5■■□□□ 1.83
TRIM3-214ENST00000536344 PRDM11Q9NQV5 511 aa26.5■■□□□ 1.83
TRIM3-214ENST00000536344 PRAMEF22A3QJZ6 481 aa26.5■■□□□ 1.83
TRIM3-214ENST00000536344 RNMTO43148 476 aaKnown RBP26.5■■□□□ 1.83
TRIM3-214ENST00000536344 HDGFL1Q5TGJ6 251 aa26.5■■□□□ 1.83
TRIM3-214ENST00000536344 CEMIPQ8WUJ3 1361 aa26.49■■□□□ 1.83
TRIM3-214ENST00000536344 PHRF1Q9P1Y6 1649 aaKnown RBP26.48■■□□□ 1.83
TRIM3-214ENST00000536344 AMOTQ4VCS5 1084 aa26.48■■□□□ 1.83
TRIM3-214ENST00000536344 C22orf23Q9BZE7 217 aa26.48■■□□□ 1.83
TRIM3-214ENST00000536344 APBB1O00213 710 aa26.48■■□□□ 1.83
TRIM3-214ENST00000536344 FLIIQ13045 1269 aa26.47■■□□□ 1.83
TRIM3-214ENST00000536344 LRRC37A3O60309 1634 aa26.47■■□□□ 1.83
TRIM3-214ENST00000536344 SLC39A6Q13433 755 aa26.47■■□□□ 1.83
TRIM3-214ENST00000536344 CCDC30Q5VVM6 783 aa26.47■■□□□ 1.83
TRIM3-214ENST00000536344 EIF4A1P60842 406 aaKnown RBP26.46■■□□□ 1.83
TRIM3-214ENST00000536344 TPM2P07951 284 aa26.46■■□□□ 1.83
TRIM3-214ENST00000536344 ANKRD45Q5TZF3 282 aa26.46■■□□□ 1.83
TRIM3-214ENST00000536344 STRN4Q9NRL3 753 aa26.46■■□□□ 1.83
TRIM3-214ENST00000536344 INTS3Q68E01 1043 aaKnown RBP26.45■■□□□ 1.83
TRIM3-214ENST00000536344 SMC5Q8IY18 1101 aa26.45■■□□□ 1.82
TRIM3-214ENST00000536344 PTPRCP08575 1304 aa26.44■■□□□ 1.82
TRIM3-214ENST00000536344 TATP17735 454 aaPredicted RBP26.44■■□□□ 1.82
TRIM3-214ENST00000536344 PRDM4Q9UKN5 801 aa26.44■■□□□ 1.82
TRIM3-214ENST00000536344 MEGF6O75095 1541 aa26.43■■□□□ 1.82
TRIM3-214ENST00000536344 CHPF2Q9P2E5 772 aa26.43■■□□□ 1.82
TRIM3-214ENST00000536344 ARID3AQ99856 593 aa26.42■■□□□ 1.82
TRIM3-214ENST00000536344 TOM1L2Q6ZVM7 507 aa26.42■■□□□ 1.82
TRIM3-214ENST00000536344 SOS2Q07890 1332 aaPredicted RBP26.42■■□□□ 1.82
TRIM3-214ENST00000536344 DDX11L8A8MPP1 907 aa26.41■■□□□ 1.82
TRIM3-214ENST00000536344 NFATC2IPQ8NCF5 419 aa26.41■■□□□ 1.82
TRIM3-214ENST00000536344 TNPO1Q92973 898 aaKnown RBP26.41■■□□□ 1.82
TRIM3-214ENST00000536344 FOXD4L1Q9NU39 408 aa26.38■■□□□ 1.81
TRIM3-214ENST00000536344 COL18A1P39060 1754 aa26.38■■□□□ 1.81
TRIM3-214ENST00000536344 CYP27B1O15528 508 aa26.38■■□□□ 1.81
TRIM3-214ENST00000536344 CHD1LQ86WJ1 897 aa26.38■■□□□ 1.81
TRIM3-214ENST00000536344 NUCB1Q02818 461 aa26.38■■□□□ 1.81
TRIM3-214ENST00000536344 NCAPD2Q15021 1401 aa26.37■■□□□ 1.81
TRIM3-214ENST00000536344 PROSER3Q2NL68 480 aa26.37■■□□□ 1.81
TRIM3-214ENST00000536344 PHKG2P15735 406 aa26.37■■□□□ 1.81
TRIM3-214ENST00000536344 HSCBQ8IWL3 235 aa26.36■■□□□ 1.81
TRIM3-214ENST00000536344 FAM13BQ9NYF5 915 aa26.36■■□□□ 1.81
TRIM3-214ENST00000536344 CHMP4BQ9H444 224 aaKnown RBP26.36■■□□□ 1.81
TRIM3-214ENST00000536344 LMO7Q8WWI1 1683 aa26.35■■□□□ 1.81
TRIM3-214ENST00000536344 PIP4K2AP48426 406 aaPredicted RBP26.35■■□□□ 1.81
TRIM3-214ENST00000536344 SPG7Q9UQ90 795 aa26.35■■□□□ 1.81
TRIM3-214ENST00000536344 A0A0U1RQG5 324 aaPredicted RBP26.34■■□□□ 1.81
TRIM3-214ENST00000536344 CEP85Q6P2H3 762 aa26.34■■□□□ 1.81
TRIM3-214ENST00000536344 CAMTA1Q9Y6Y1 1673 aa26.34■■□□□ 1.81
TRIM3-214ENST00000536344 LARP1Q6PKG0 1096 aaKnown RBP26.34■■□□□ 1.81
TRIM3-214ENST00000536344 SMARCA5O60264 1052 aaPredicted RBP26.33■■□□□ 1.81
TRIM3-214ENST00000536344 C16orf71Q8IYS4 520 aaPredicted RBP26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms