RNA–Protein interactions for RNA: ENST00000535883.5

LRTOMT-211, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 1,263 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-211ENST00000535883 NEUROD1Q13562 356 aa12.57□□□□□ -0.4
LRTOMT-211ENST00000535883 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
LRTOMT-211ENST00000535883 TESK2Q96S53 571 aa12.57□□□□□ -0.4
LRTOMT-211ENST00000535883 GGNBP2Q9H3C7 697 aa12.57□□□□□ -0.4
LRTOMT-211ENST00000535883 BRCA1P38398 1863 aaKnown RBP12.57□□□□□ -0.4
LRTOMT-211ENST00000535883 ATG3Q9NT62 314 aa12.56□□□□□ -0.4
LRTOMT-211ENST00000535883 HSPA1AP0DMV8 641 aaKnown RBP12.55□□□□□ -0.4
LRTOMT-211ENST00000535883 HSPA1BP0DMV9 641 aaKnown RBP12.55□□□□□ -0.4
LRTOMT-211ENST00000535883 GYS1P13807 737 aa12.55□□□□□ -0.4
LRTOMT-211ENST00000535883 ARHGEF1Q92888 912 aaKnown RBP12.55□□□□□ -0.4
LRTOMT-211ENST00000535883 CARD11Q9BXL7 1154 aa12.55□□□□□ -0.4
LRTOMT-211ENST00000535883 RTL1A6NKG5 1358 aa12.55□□□□□ -0.4
LRTOMT-211ENST00000535883 ATP6V1AP38606 617 aa12.54□□□□□ -0.4
LRTOMT-211ENST00000535883 DCAF5Q96JK2 942 aa12.54□□□□□ -0.4
LRTOMT-211ENST00000535883 PUS7Q96PZ0 661 aaKnown RBP12.54□□□□□ -0.4
LRTOMT-211ENST00000535883 INSRP06213 1382 aa12.54□□□□□ -0.4
LRTOMT-211ENST00000535883 TMF1P82094 1093 aa12.53□□□□□ -0.4
LRTOMT-211ENST00000535883 NCAPD2Q15021 1401 aa12.53□□□□□ -0.4
LRTOMT-211ENST00000535883 PKD1L3Q7Z443 1732 aa12.52□□□□□ -0.41
LRTOMT-211ENST00000535883 RNF181Q9P0P0 153 aa12.52□□□□□ -0.41
LRTOMT-211ENST00000535883 EMILIN1Q9Y6C2 1016 aa12.52□□□□□ -0.41
LRTOMT-211ENST00000535883 KDRP35968 1356 aa12.52□□□□□ -0.41
LRTOMT-211ENST00000535883 POTECB2RU33 542 aa12.51□□□□□ -0.41
LRTOMT-211ENST00000535883 CHRNA5P30532 468 aa12.51□□□□□ -0.41
LRTOMT-211ENST00000535883 DDR1Q08345 913 aa12.51□□□□□ -0.41
LRTOMT-211ENST00000535883 TRAPPC3LQ5T215 181 aa12.51□□□□□ -0.41
LRTOMT-211ENST00000535883 C16orf71Q8IYS4 520 aaPredicted RBP12.51□□□□□ -0.41
LRTOMT-211ENST00000535883 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
LRTOMT-211ENST00000535883 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
LRTOMT-211ENST00000535883 SBF1O95248 1867 aa12.51□□□□□ -0.41
LRTOMT-211ENST00000535883 SLC34A2O95436 690 aa12.5□□□□□ -0.41
LRTOMT-211ENST00000535883 SRP68Q9UHB9 627 aaKnown RBP12.5□□□□□ -0.41
LRTOMT-211ENST00000535883 ARFGEF1Q9Y6D6 1849 aa12.5□□□□□ -0.41
LRTOMT-211ENST00000535883 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
LRTOMT-211ENST00000535883 ST20-MTHFSA0A0A6YYL1 179 aa12.49□□□□□ -0.41
LRTOMT-211ENST00000535883 PHKG2P15735 406 aa12.49□□□□□ -0.41
LRTOMT-211ENST00000535883 RASSF7Q02833 373 aa12.49□□□□□ -0.41
LRTOMT-211ENST00000535883 FKBP8Q14318 412 aa12.49□□□□□ -0.41
LRTOMT-211ENST00000535883 EYA1Q99502 592 aa12.49□□□□□ -0.41
LRTOMT-211ENST00000535883 CCDC87Q9NVE4 849 aa12.49□□□□□ -0.41
LRTOMT-211ENST00000535883 TMOD3Q9NYL9 352 aa12.49□□□□□ -0.41
LRTOMT-211ENST00000535883 PIM2Q9P1W9 311 aa12.49□□□□□ -0.41
LRTOMT-211ENST00000535883 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
LRTOMT-211ENST00000535883 FLT4P35916 1363 aa12.48□□□□□ -0.41
LRTOMT-211ENST00000535883 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
LRTOMT-211ENST00000535883 KDM2BQ8NHM5 1336 aa12.48□□□□□ -0.41
LRTOMT-211ENST00000535883 HMGB2P26583 209 aaKnown RBP12.48□□□□□ -0.41
LRTOMT-211ENST00000535883 DALRD3Q5D0E6 543 aaKnown RBP12.48□□□□□ -0.41
LRTOMT-211ENST00000535883 RC3H1Q5TC82 1133 aaKnown RBP12.48□□□□□ -0.41
LRTOMT-211ENST00000535883 SMC1BQ8NDV3 1235 aa12.48□□□□□ -0.41
LRTOMT-211ENST00000535883 RPS6KA4O75676 772 aa12.47□□□□□ -0.41
LRTOMT-211ENST00000535883 CARD14Q9BXL6 1004 aa12.47□□□□□ -0.41
LRTOMT-211ENST00000535883 KDM6AO15550 1401 aaPredicted RBP12.46□□□□□ -0.41
LRTOMT-211ENST00000535883 SMG6Q86US8 1419 aaKnown RBP12.46□□□□□ -0.41
LRTOMT-211ENST00000535883 TONSLQ96HA7 1378 aa12.46□□□□□ -0.41
LRTOMT-211ENST00000535883 PARP3Q9Y6F1 533 aa12.46□□□□□ -0.41
LRTOMT-211ENST00000535883 CNTNAP4Q9C0A0 1308 aa12.45□□□□□ -0.42
LRTOMT-211ENST00000535883 TM4SF1P30408 202 aa12.45□□□□□ -0.42
LRTOMT-211ENST00000535883 RFC4P35249 363 aa12.45□□□□□ -0.42
LRTOMT-211ENST00000535883 RBM42Q9BTD8 480 aaKnown RBP12.45□□□□□ -0.42
LRTOMT-211ENST00000535883 SPG7Q9UQ90 795 aa12.45□□□□□ -0.42
LRTOMT-211ENST00000535883 TNRC6CQ9HCJ0 1690 aaKnown RBP12.45□□□□□ -0.42
LRTOMT-211ENST00000535883 GLTPD2A6NH11 291 aa12.44□□□□□ -0.42
LRTOMT-211ENST00000535883 POLRMTO00411 1230 aaKnown RBP12.44□□□□□ -0.42
LRTOMT-211ENST00000535883 FOXN1O15353 648 aa12.44□□□□□ -0.42
LRTOMT-211ENST00000535883 ADRA2BP18089 450 aa12.44□□□□□ -0.42
LRTOMT-211ENST00000535883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.44□□□□□ -0.42
LRTOMT-211ENST00000535883 COL5A3P25940 1745 aaPredicted RBP12.44□□□□□ -0.42
LRTOMT-211ENST00000535883 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
LRTOMT-211ENST00000535883 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
LRTOMT-211ENST00000535883 VEGFAP15692 232 aaPredicted RBP12.43□□□□□ -0.42
LRTOMT-211ENST00000535883 IFNL2Q8IZJ0 200 aa12.43□□□□□ -0.42
LRTOMT-211ENST00000535883 KIF24Q5T7B8 1368 aa12.43□□□□□ -0.42
LRTOMT-211ENST00000535883 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
LRTOMT-211ENST00000535883 NFKBIEO00221 500 aa12.42□□□□□ -0.42
LRTOMT-211ENST00000535883 INTS5Q6P9B9 1019 aaKnown RBP12.42□□□□□ -0.42
LRTOMT-211ENST00000535883 MKRN1Q9UHC7 482 aaKnown RBP12.42□□□□□ -0.42
LRTOMT-211ENST00000535883 WASHC2AQ641Q2 1341 aa12.41□□□□□ -0.42
LRTOMT-211ENST00000535883 USP42Q9H9J4 1324 aaKnown RBP12.41□□□□□ -0.42
LRTOMT-211ENST00000535883 PPM1GO15355 546 aaPredicted RBP12.41□□□□□ -0.42
LRTOMT-211ENST00000535883 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
LRTOMT-211ENST00000535883 ZNF831Q5JPB2 1677 aa12.41□□□□□ -0.42
LRTOMT-211ENST00000535883 LMNB1P20700 586 aa12.4□□□□□ -0.42
LRTOMT-211ENST00000535883 POLKQ9UBT6 870 aa12.4□□□□□ -0.42
LRTOMT-211ENST00000535883 ERVV-2B6SEH9 535 aa12.39□□□□□ -0.43
LRTOMT-211ENST00000535883 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
LRTOMT-211ENST00000535883 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
LRTOMT-211ENST00000535883 BCL2L12Q9HB09 334 aa12.39□□□□□ -0.43
LRTOMT-211ENST00000535883 TNRC18O15417 2968 aaPredicted RBP12.38□□□□□ -0.43
LRTOMT-211ENST00000535883 ZC3H4Q9UPT8 1303 aaKnown RBP12.37□□□□□ -0.43
LRTOMT-211ENST00000535883 NFIXQ14938 502 aa12.37□□□□□ -0.43
LRTOMT-211ENST00000535883 USPL1Q5W0Q7 1092 aa12.37□□□□□ -0.43
LRTOMT-211ENST00000535883 CARMIL3Q8ND23 1372 aa12.37□□□□□ -0.43
LRTOMT-211ENST00000535883 CCDC88AQ3V6T2 1871 aa12.37□□□□□ -0.43
LRTOMT-211ENST00000535883 KIF20BQ96Q89 1820 aa12.37□□□□□ -0.43
LRTOMT-211ENST00000535883 ANKRD26Q9UPS8 1709 aa12.37□□□□□ -0.43
LRTOMT-211ENST00000535883 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
LRTOMT-211ENST00000535883 PRDM10Q9NQV6 1147 aa12.36□□□□□ -0.43
LRTOMT-211ENST00000535883 CREBZFQ9NS37 354 aa12.36□□□□□ -0.43
LRTOMT-211ENST00000535883 AFDNP55196 1824 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms