RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 LRRC37A3O60309 1634 aa8.44□□□□□ -1.06
CDCA3-205ENST00000535871 HSPA1LP34931 641 aa8.44□□□□□ -1.06
CDCA3-205ENST00000535871 VPS72Q15906 364 aa8.44□□□□□ -1.06
CDCA3-205ENST00000535871 C1orf141Q5JVX7 400 aa8.44□□□□□ -1.06
CDCA3-205ENST00000535871 IFNL2Q8IZJ0 200 aa8.44□□□□□ -1.06
CDCA3-205ENST00000535871 FBXO41Q8TF61 875 aa8.44□□□□□ -1.06
CDCA3-205ENST00000535871 RNF123Q5XPI4 1314 aa8.44□□□□□ -1.06
CDCA3-205ENST00000535871 PCDH11XQ9BZA7 1347 aa8.44□□□□□ -1.06
CDCA3-205ENST00000535871 PCDH11YQ9BZA8 1340 aa8.44□□□□□ -1.06
CDCA3-205ENST00000535871 RGPD2P0DJD1 1756 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 CHL1O00533 1208 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
CDCA3-205ENST00000535871 ERICH6BQ5W0A0 696 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 DCAF5Q96JK2 942 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 SGIP1Q9BQI5 828 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 WDR70Q9NW82 654 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 SPATA31A1Q5TZJ5 1347 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 SPATA31A5Q5VU36 1347 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 SPATA31A7Q8IWB4 1347 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 BCL9LQ86UU0 1499 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 MEGF6O75095 1541 aa8.43□□□□□ -1.06
CDCA3-205ENST00000535871 ZBTB7CA1YPR0 619 aa8.42□□□□□ -1.06
CDCA3-205ENST00000535871 HOXB7P09629 217 aa8.42□□□□□ -1.06
CDCA3-205ENST00000535871 CHRM1P11229 460 aaPredicted RBP8.42□□□□□ -1.06
CDCA3-205ENST00000535871 ZNF530Q6P9A1 599 aaPredicted RBP8.42□□□□□ -1.06
CDCA3-205ENST00000535871 LARP1Q6PKG0 1096 aaKnown RBP8.42□□□□□ -1.06
CDCA3-205ENST00000535871 HOMEZQ8IX15 550 aa8.42□□□□□ -1.06
CDCA3-205ENST00000535871 ZCRB1Q8TBF4 217 aaKnown RBP8.42□□□□□ -1.06
CDCA3-205ENST00000535871 MRC1P22897 1456 aa8.42□□□□□ -1.06
CDCA3-205ENST00000535871 LRP6O75581 1613 aa8.42□□□□□ -1.06
CDCA3-205ENST00000535871 BCL9O00512 1426 aa8.41□□□□□ -1.06
CDCA3-205ENST00000535871 ERVV-2B6SEH9 535 aa8.41□□□□□ -1.06
CDCA3-205ENST00000535871 ONECUT3O60422 494 aaPredicted RBP8.41□□□□□ -1.06
CDCA3-205ENST00000535871 PHKG2P15735 406 aa8.41□□□□□ -1.06
CDCA3-205ENST00000535871 TAF7Q15545 349 aaPredicted RBP8.41□□□□□ -1.06
CDCA3-205ENST00000535871 NEUROD2Q15784 382 aa8.41□□□□□ -1.06
CDCA3-205ENST00000535871 NGLY1Q96IV0 654 aa8.41□□□□□ -1.06
CDCA3-205ENST00000535871 RRP7AQ9Y3A4 280 aaKnown RBP8.41□□□□□ -1.06
CDCA3-205ENST00000535871 WNK3Q9BYP7 1800 aa8.4□□□□□ -1.06
CDCA3-205ENST00000535871 TNS2Q63HR2 1409 aa8.4□□□□□ -1.06
CDCA3-205ENST00000535871 FANCIQ9NVI1 1328 aa8.4□□□□□ -1.06
CDCA3-205ENST00000535871 ADAMTS2O95450 1211 aa8.4□□□□□ -1.06
CDCA3-205ENST00000535871 ALDH1L2Q3SY69 923 aa8.4□□□□□ -1.06
CDCA3-205ENST00000535871 IL17REQ8NFR9 667 aa8.4□□□□□ -1.06
CDCA3-205ENST00000535871 CDCA7LQ96GN5 454 aa8.4□□□□□ -1.06
CDCA3-205ENST00000535871 RCAN3Q9UKA8 241 aa8.4□□□□□ -1.06
CDCA3-205ENST00000535871 SCN11AQ9UI33 1791 aa8.4□□□□□ -1.07
CDCA3-205ENST00000535871 CACNA1FO60840 1977 aa8.39□□□□□ -1.07
CDCA3-205ENST00000535871 EXOC5O00471 708 aa8.39□□□□□ -1.07
CDCA3-205ENST00000535871 CYP27B1O15528 508 aa8.39□□□□□ -1.07
CDCA3-205ENST00000535871 RNMTO43148 476 aaKnown RBP8.39□□□□□ -1.07
CDCA3-205ENST00000535871 TEFQ10587 303 aa8.39□□□□□ -1.07
CDCA3-205ENST00000535871 USHBP1Q8N6Y0 703 aa8.39□□□□□ -1.07
CDCA3-205ENST00000535871 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.39□□□□□ -1.07
CDCA3-205ENST00000535871 SPDYE1Q8NFV5 336 aaPredicted RBP8.39□□□□□ -1.07
CDCA3-205ENST00000535871 STRN4Q9NRL3 753 aa8.39□□□□□ -1.07
CDCA3-205ENST00000535871 TRPC5Q9UL62 973 aaPredicted RBP8.39□□□□□ -1.07
CDCA3-205ENST00000535871 ATRNO75882 1429 aa8.38□□□□□ -1.07
CDCA3-205ENST00000535871 NUTM2BA6NNL0 878 aaPredicted RBP8.38□□□□□ -1.07
CDCA3-205ENST00000535871 NUTM2EB1AL46 878 aaPredicted RBP8.38□□□□□ -1.07
CDCA3-205ENST00000535871 MS4A1P11836 297 aa8.38□□□□□ -1.07
CDCA3-205ENST00000535871 HMGB2P26583 209 aaKnown RBP8.38□□□□□ -1.07
CDCA3-205ENST00000535871 AAMPQ13685 434 aa8.38□□□□□ -1.07
CDCA3-205ENST00000535871 NUTM2AQ8IVF1 878 aaPredicted RBP8.38□□□□□ -1.07
CDCA3-205ENST00000535871 KCNV2Q8TDN2 545 aa8.38□□□□□ -1.07
CDCA3-205ENST00000535871 C8orf37Q96NL8 207 aa8.38□□□□□ -1.07
CDCA3-205ENST00000535871 SLC52A2Q9HAB3 445 aa8.38□□□□□ -1.07
CDCA3-205ENST00000535871 USP21Q9UK80 565 aa8.38□□□□□ -1.07
CDCA3-205ENST00000535871 SALL2Q9Y467 1007 aaPredicted RBP8.38□□□□□ -1.07
CDCA3-205ENST00000535871 SIPA1L3O60292 1781 aaPredicted RBP8.38□□□□□ -1.07
CDCA3-205ENST00000535871 HEG1Q9ULI3 1381 aa8.37□□□□□ -1.07
CDCA3-205ENST00000535871 ZNF772Q68DY9 489 aaPredicted RBP8.37□□□□□ -1.07
CDCA3-205ENST00000535871 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.37□□□□□ -1.07
CDCA3-205ENST00000535871 MCM10Q7L590 875 aa8.37□□□□□ -1.07
CDCA3-205ENST00000535871 MBIPQ9NS73 344 aa8.37□□□□□ -1.07
CDCA3-205ENST00000535871 SHANK3Q9BYB0 1731 aa8.37□□□□□ -1.07
CDCA3-205ENST00000535871 KDM6AO15550 1401 aaPredicted RBP8.37□□□□□ -1.07
CDCA3-205ENST00000535871 KIF16BQ96L93 1317 aa8.36□□□□□ -1.07
CDCA3-205ENST00000535871 PYGBP11216 843 aa8.36□□□□□ -1.07
CDCA3-205ENST00000535871 RARSP54136 660 aaKnown RBP8.36□□□□□ -1.07
CDCA3-205ENST00000535871 PDE3AQ14432 1141 aa8.36□□□□□ -1.07
CDCA3-205ENST00000535871 DDB1Q16531 1140 aa8.36□□□□□ -1.07
CDCA3-205ENST00000535871 MEX3CQ5U5Q3 659 aaKnown RBP8.36□□□□□ -1.07
CDCA3-205ENST00000535871 RASEFQ8IZ41 740 aa8.36□□□□□ -1.07
CDCA3-205ENST00000535871 ARHGAP45Q92619 1136 aa8.36□□□□□ -1.07
CDCA3-205ENST00000535871 GJD4Q96KN9 370 aaPredicted RBP8.36□□□□□ -1.07
CDCA3-205ENST00000535871 TSPYL4Q9UJ04 414 aa8.36□□□□□ -1.07
CDCA3-205ENST00000535871 THSD7AQ9UPZ6 1657 aa8.36□□□□□ -1.07
CDCA3-205ENST00000535871 VIRMAQ69YN4 1812 aaKnown RBP8.36□□□□□ -1.07
CDCA3-205ENST00000535871 KDM3BQ7LBC6 1761 aa8.35□□□□□ -1.07
CDCA3-205ENST00000535871 AFF2P51816 1311 aa8.35□□□□□ -1.07
CDCA3-205ENST00000535871 KAT6BQ8WYB5 2073 aa8.35□□□□□ -1.07
CDCA3-205ENST00000535871 IPO8O15397 1037 aaKnown RBP8.35□□□□□ -1.07
CDCA3-205ENST00000535871 VAMP4O75379 141 aa8.35□□□□□ -1.07
CDCA3-205ENST00000535871 NEFLP07196 543 aa8.35□□□□□ -1.07
CDCA3-205ENST00000535871 CREBZFQ9NS37 354 aa8.35□□□□□ -1.07
CDCA3-205ENST00000535871 CLEC11AQ9Y240 323 aa8.35□□□□□ -1.07
CDCA3-205ENST00000535871 ERBB4Q15303 1308 aa8.34□□□□□ -1.07
CDCA3-205ENST00000535871 BTBD11A6QL63 1104 aa8.34□□□□□ -1.07
CDCA3-205ENST00000535871 PRR29P0C7W0 189 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms