RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 GMPRP36959 345 aa6.26□□□□□ -1.41
GYPA-211ENST00000535709 VEGFBP49765 207 aa6.26□□□□□ -1.41
GYPA-211ENST00000535709 SETQ01105 290 aaPredicted RBP6.26□□□□□ -1.41
GYPA-211ENST00000535709 RNF20Q5VTR2 975 aa6.26□□□□□ -1.41
GYPA-211ENST00000535709 NOL8Q76FK4 1167 aaKnown RBP6.26□□□□□ -1.41
GYPA-211ENST00000535709 TBC1D2BQ9UPU7 963 aa6.26□□□□□ -1.41
GYPA-211ENST00000535709 PCDHB9Q9Y5E1 797 aa6.26□□□□□ -1.41
GYPA-211ENST00000535709 BAZ1BQ9UIG0 1483 aaKnown RBP6.26□□□□□ -1.41
GYPA-211ENST00000535709 ANKRD62A6NC57 917 aa6.25□□□□□ -1.41
GYPA-211ENST00000535709 FAM181BA6NEQ2 426 aa6.25□□□□□ -1.41
GYPA-211ENST00000535709 TCF3P15923 654 aa6.25□□□□□ -1.41
GYPA-211ENST00000535709 ERCC3P19447 782 aa6.25□□□□□ -1.41
GYPA-211ENST00000535709 TMED8Q6PL24 325 aaPredicted RBP6.25□□□□□ -1.41
GYPA-211ENST00000535709 UBXN4Q92575 508 aa6.25□□□□□ -1.41
GYPA-211ENST00000535709 PBXIP1Q96AQ6 731 aa6.25□□□□□ -1.41
GYPA-211ENST00000535709 TMPRSS4Q9NRS4 437 aa6.25□□□□□ -1.41
GYPA-211ENST00000535709 KIAA1522Q9P206 1035 aaPredicted RBP6.25□□□□□ -1.41
GYPA-211ENST00000535709 RIPOR2Q9Y4F9 1068 aa6.25□□□□□ -1.41
GYPA-211ENST00000535709 RELBQ01201 579 aa6.24□□□□□ -1.41
GYPA-211ENST00000535709 EXOC8Q8IYI6 725 aa6.24□□□□□ -1.41
GYPA-211ENST00000535709 MRRFQ96E11 262 aaKnown RBP6.24□□□□□ -1.41
GYPA-211ENST00000535709 HIRIP3Q9BW71 556 aaPredicted RBP6.24□□□□□ -1.41
GYPA-211ENST00000535709 PRM3Q9NNZ6 103 aa6.24□□□□□ -1.41
GYPA-211ENST00000535709 LOC102724159A0A0B4J2E5 919 aa6.23□□□□□ -1.41
GYPA-211ENST00000535709 CSB-PGBD3P0DP91 1061 aa6.23□□□□□ -1.41
GYPA-211ENST00000535709 PTGIRP43119 386 aa6.23□□□□□ -1.41
GYPA-211ENST00000535709 RAB15P59190 212 aa6.23□□□□□ -1.41
GYPA-211ENST00000535709 FGD1P98174 961 aa6.23□□□□□ -1.41
GYPA-211ENST00000535709 PTSQ03393 145 aa6.23□□□□□ -1.41
GYPA-211ENST00000535709 PWP2Q15269 919 aaKnown RBP6.23□□□□□ -1.41
GYPA-211ENST00000535709 RNF217Q8TC41 542 aa6.23□□□□□ -1.41
GYPA-211ENST00000535709 AGBL1Q96MI9 1066 aa6.23□□□□□ -1.41
GYPA-211ENST00000535709 GIGYF1O75420 1035 aaPredicted RBP6.22□□□□□ -1.41
GYPA-211ENST00000535709 ABL2P42684 1182 aa6.22□□□□□ -1.41
GYPA-211ENST00000535709 CTSOP43234 321 aaPredicted RBP6.22□□□□□ -1.41
GYPA-211ENST00000535709 ERVK-9P63128 1117 aa6.22□□□□□ -1.41
GYPA-211ENST00000535709 TEX2Q8IWB9 1127 aa6.22□□□□□ -1.41
GYPA-211ENST00000535709 ZSCAN1Q8NBB4 408 aa6.22□□□□□ -1.41
GYPA-211ENST00000535709 INSM2Q96T92 566 aaPredicted RBP6.22□□□□□ -1.41
GYPA-211ENST00000535709 MYH16Q9H6N6 1097 aa6.22□□□□□ -1.41
GYPA-211ENST00000535709 POLMQ9NP87 494 aaPredicted RBP6.22□□□□□ -1.41
GYPA-211ENST00000535709 CYLDQ9NQC7 956 aa6.22□□□□□ -1.41
GYPA-211ENST00000535709 SLC35F4A4IF30 521 aa6.21□□□□□ -1.42
GYPA-211ENST00000535709 GPC1P35052 558 aa6.21□□□□□ -1.42
GYPA-211ENST00000535709 ADD1P35611 737 aaKnown RBP6.21□□□□□ -1.42
GYPA-211ENST00000535709 SF3A1Q15459 793 aaKnown RBP6.21□□□□□ -1.42
GYPA-211ENST00000535709 TXNDC2Q86VQ3 553 aa6.21□□□□□ -1.42
GYPA-211ENST00000535709 KDF1Q8NAX2 398 aaPredicted RBP6.21□□□□□ -1.42
GYPA-211ENST00000535709 ZNF526Q8TF50 670 aaPredicted RBP6.21□□□□□ -1.42
GYPA-211ENST00000535709 NANOS1Q8WY41 292 aaKnown RBP6.21□□□□□ -1.42
GYPA-211ENST00000535709 FIGNL2A6NMB9 653 aa6.2□□□□□ -1.42
GYPA-211ENST00000535709 ATP5J2-PTCD1G3V325 749 aa6.2□□□□□ -1.42
GYPA-211ENST00000535709 LORP23490 312 aaPredicted RBP6.2□□□□□ -1.42
GYPA-211ENST00000535709 CYP2U1Q7Z449 544 aa6.2□□□□□ -1.42
GYPA-211ENST00000535709 CCDC155Q8N6L0 562 aa6.2□□□□□ -1.42
GYPA-211ENST00000535709 GNEQ9Y223 722 aaKnown RBP6.2□□□□□ -1.42
GYPA-211ENST00000535709 POM121CA8CG34 1229 aa6.19□□□□□ -1.42
GYPA-211ENST00000535709 MAFGO15525 162 aa6.19□□□□□ -1.42
GYPA-211ENST00000535709 MARCH6O60337 910 aa6.19□□□□□ -1.42
GYPA-211ENST00000535709 RNF144AP50876 292 aaPredicted RBP6.19□□□□□ -1.42
GYPA-211ENST00000535709 ZC3H6P61129 1189 aaKnown RBP6.19□□□□□ -1.42
GYPA-211ENST00000535709 CALR3Q96L12 384 aaKnown RBP6.19□□□□□ -1.42
GYPA-211ENST00000535709 ZNF395Q9H8N7 513 aaPredicted RBP6.19□□□□□ -1.42
GYPA-211ENST00000535709 NESP48681 1621 aa6.18□□□□□ -1.42
GYPA-211ENST00000535709 ITGA6P23229 1130 aa6.18□□□□□ -1.42
GYPA-211ENST00000535709 LYSMD3Q7Z3D4 306 aa6.18□□□□□ -1.42
GYPA-211ENST00000535709 WWC1Q8IX03 1113 aa6.18□□□□□ -1.42
GYPA-211ENST00000535709 SIRT1Q96EB6 747 aa6.18□□□□□ -1.42
GYPA-211ENST00000535709 PPME1Q9Y570 386 aa6.18□□□□□ -1.42
GYPA-211ENST00000535709 EIF4G2P78344 907 aaKnown RBP eCLIP6.17□□□□□ -1.42
GYPA-211ENST00000535709 HSP90AB4PQ58FF6 505 aa6.17□□□□□ -1.42
GYPA-211ENST00000535709 GORABQ5T7V8 394 aa6.17□□□□□ -1.42
GYPA-211ENST00000535709 PCDHB11Q9Y5F2 797 aa6.17□□□□□ -1.42
GYPA-211ENST00000535709 SENP3-EIF4A1A0A087X0R7 540 aa6.16□□□□□ -1.42
GYPA-211ENST00000535709 VAMP1P23763 118 aa6.16□□□□□ -1.42
GYPA-211ENST00000535709 IRX6P78412 446 aaPredicted RBP6.16□□□□□ -1.42
GYPA-211ENST00000535709 TPD52L2O43399 206 aaKnown RBP6.15□□□□□ -1.42
GYPA-211ENST00000535709 ZNF16P17020 682 aaPredicted RBP6.15□□□□□ -1.42
GYPA-211ENST00000535709 PTMSP20962 102 aa6.15□□□□□ -1.42
GYPA-211ENST00000535709 VAC14Q08AM6 782 aa6.15□□□□□ -1.42
GYPA-211ENST00000535709 CLN3Q13286 438 aa6.15□□□□□ -1.42
GYPA-211ENST00000535709 SV2AQ7L0J3 742 aa6.15□□□□□ -1.42
GYPA-211ENST00000535709 MICAL1Q8TDZ2 1067 aa6.15□□□□□ -1.42
GYPA-211ENST00000535709 ADAMTS19Q8TE59 1207 aa6.15□□□□□ -1.42
GYPA-211ENST00000535709 GMCL1Q96IK5 515 aa6.15□□□□□ -1.42
GYPA-211ENST00000535709 OSBPL3Q9H4L5 887 aa6.15□□□□□ -1.42
GYPA-211ENST00000535709 CEP126Q9P2H0 1117 aa6.15□□□□□ -1.42
GYPA-211ENST00000535709 CFTRP13569 1480 aa6.15□□□□□ -1.43
GYPA-211ENST00000535709 A0A1W2PRU2 124 aa6.14□□□□□ -1.43
GYPA-211ENST00000535709 MYCP01106 439 aaPredicted RBP6.14□□□□□ -1.43
GYPA-211ENST00000535709 SOX11P35716 441 aa6.14□□□□□ -1.43
GYPA-211ENST00000535709 SCTRP47872 440 aa6.14□□□□□ -1.43
GYPA-211ENST00000535709 WASHC4Q2M389 1173 aa6.14□□□□□ -1.43
GYPA-211ENST00000535709 CCDC181Q5TID7 509 aa6.14□□□□□ -1.43
GYPA-211ENST00000535709 B4GALNT3Q6L9W6 998 aa6.14□□□□□ -1.43
GYPA-211ENST00000535709 GLMNQ92990 594 aa6.14□□□□□ -1.43
GYPA-211ENST00000535709 PKNOX2Q96KN3 472 aa6.14□□□□□ -1.43
GYPA-211ENST00000535709 NLRP3Q96P20 1036 aa6.14□□□□□ -1.43
GYPA-211ENST00000535709 ESF1Q9H501 851 aaKnown RBP6.14□□□□□ -1.43
GYPA-211ENST00000535709 VRTNQ9H8Y1 702 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms