RNA–Protein interactions for RNA: ENST00000535621.6

PDXDC1-205, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene PDXDC1, Length 2,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-205ENST00000535621 SPG7Q9UQ90 795 aa26.8■■□□□ 1.88
PDXDC1-205ENST00000535621 PHKG2P15735 406 aa26.79■■□□□ 1.88
PDXDC1-205ENST00000535621 ADAMTS7Q9UKP4 1686 aa26.79■■□□□ 1.88
PDXDC1-205ENST00000535621 TCERG1O14776 1098 aaKnown RBP26.78■■□□□ 1.88
PDXDC1-205ENST00000535621 AAMPQ13685 434 aa26.78■■□□□ 1.88
PDXDC1-205ENST00000535621 ARHGAP45Q92619 1136 aa26.78■■□□□ 1.88
PDXDC1-205ENST00000535621 KDM6AO15550 1401 aaPredicted RBP26.78■■□□□ 1.88
PDXDC1-205ENST00000535621 SPATA31A6Q5VVP1 1343 aa26.78■■□□□ 1.88
PDXDC1-205ENST00000535621 RNMTO43148 476 aaKnown RBP26.78■■□□□ 1.88
PDXDC1-205ENST00000535621 KDM2BQ8NHM5 1336 aa26.77■■□□□ 1.88
PDXDC1-205ENST00000535621 NGLY1Q96IV0 654 aa26.77■■□□□ 1.88
PDXDC1-205ENST00000535621 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.77■■□□□ 1.881e-7■■■□□ 14.6
PDXDC1-205ENST00000535621 SIPA1L3O60292 1781 aaPredicted RBP26.77■■□□□ 1.88
PDXDC1-205ENST00000535621 ZCRB1Q8TBF4 217 aaKnown RBP26.75■■□□□ 1.87
PDXDC1-205ENST00000535621 BCL9LQ86UU0 1499 aa26.74■■□□□ 1.87
PDXDC1-205ENST00000535621 DISP2A7MBM2 1401 aa26.74■■□□□ 1.87
PDXDC1-205ENST00000535621 IFNL2Q8IZJ0 200 aa26.74■■□□□ 1.87
PDXDC1-205ENST00000535621 SPATA31A1Q5TZJ5 1347 aa26.73■■□□□ 1.87
PDXDC1-205ENST00000535621 KDM3BQ7LBC6 1761 aa26.73■■□□□ 1.87
PDXDC1-205ENST00000535621 TMEM57Q8N5G2 664 aa26.73■■□□□ 1.87
PDXDC1-205ENST00000535621 TEFQ10587 303 aa26.72■■□□□ 1.87
PDXDC1-205ENST00000535621 CENPQQ7L2Z9 268 aaPredicted RBP26.72■■□□□ 1.87
PDXDC1-205ENST00000535621 DDX54Q8TDD1 881 aaKnown RBP26.72■■□□□ 1.87
PDXDC1-205ENST00000535621 TSHZ2Q9NRE2 1034 aa26.72■■□□□ 1.87
PDXDC1-205ENST00000535621 DDX19BQ9UMR2 479 aa26.72■■□□□ 1.87
PDXDC1-205ENST00000535621 CCDC9Q9Y3X0 531 aaKnown RBP26.72■■□□□ 1.87
PDXDC1-205ENST00000535621 KCNQ3O43525 872 aa26.71■■□□□ 1.87
PDXDC1-205ENST00000535621 ITPRIPQ8IWB1 547 aa26.71■■□□□ 1.87
PDXDC1-205ENST00000535621 UNC5CLQ8IV45 518 aa26.7■■□□□ 1.87
PDXDC1-205ENST00000535621 SOS1Q07889 1333 aaPredicted RBP26.7■■□□□ 1.86
PDXDC1-205ENST00000535621 PCDH11XQ9BZA7 1347 aa26.7■■□□□ 1.86
PDXDC1-205ENST00000535621 PCDH11YQ9BZA8 1340 aa26.7■■□□□ 1.86
PDXDC1-205ENST00000535621 SPATA31A5Q5VU36 1347 aa26.69■■□□□ 1.86
PDXDC1-205ENST00000535621 SPATA31A7Q8IWB4 1347 aa26.69■■□□□ 1.86
PDXDC1-205ENST00000535621 ABCC4O15439 1325 aa26.68■■□□□ 1.86
PDXDC1-205ENST00000535621 MEX3CQ5U5Q3 659 aaKnown RBP26.68■■□□□ 1.86
PDXDC1-205ENST00000535621 BTBD11A6QL63 1104 aa26.67■■□□□ 1.86
PDXDC1-205ENST00000535621 FNBP4Q8N3X1 1017 aaPredicted RBP26.67■■□□□ 1.86
PDXDC1-205ENST00000535621 API5Q9BZZ5 524 aaKnown RBP26.67■■□□□ 1.86
PDXDC1-205ENST00000535621 TOGARAM1Q9Y4F4 1720 aa26.67■■□□□ 1.86
PDXDC1-205ENST00000535621 PCDHB15Q9Y5E8 787 aa26.66■■□□□ 1.86
PDXDC1-205ENST00000535621 SLC4A2P04920 1241 aa26.66■■□□□ 1.86
PDXDC1-205ENST00000535621 EIF4A1P60842 406 aaKnown RBP26.66■■□□□ 1.86
PDXDC1-205ENST00000535621 IGHDP01880 384 aa26.65■■□□□ 1.86
PDXDC1-205ENST00000535621 NFATC2IPQ8NCF5 419 aa26.65■■□□□ 1.86
PDXDC1-205ENST00000535621 DCAF5Q96JK2 942 aa26.65■■□□□ 1.86
PDXDC1-205ENST00000535621 USP21Q9UK80 565 aa26.65■■□□□ 1.86
PDXDC1-205ENST00000535621 PTPRCP08575 1304 aa26.63■■□□□ 1.85
PDXDC1-205ENST00000535621 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.63■■□□□ 1.85
PDXDC1-205ENST00000535621 SLC52A2Q9HAB3 445 aa26.63■■□□□ 1.85
PDXDC1-205ENST00000535621 RGS12O14924 1447 aa26.63■■□□□ 1.85
PDXDC1-205ENST00000535621 KAT6BQ8WYB5 2073 aa26.63■■□□□ 1.85
PDXDC1-205ENST00000535621 CCDC30Q5VVM6 783 aa26.63■■□□□ 1.85
PDXDC1-205ENST00000535621 ZBTB40Q9NUA8 1239 aa26.63■■□□□ 1.85
PDXDC1-205ENST00000535621 MRC1P22897 1456 aa26.63■■□□□ 1.85
PDXDC1-205ENST00000535621 SLC39A6Q13433 755 aa26.62■■□□□ 1.85
PDXDC1-205ENST00000535621 AFF2P51816 1311 aa26.61■■□□□ 1.85
PDXDC1-205ENST00000535621 VPS72Q15906 364 aa26.61■■□□□ 1.85
PDXDC1-205ENST00000535621 STK31Q9BXU1 1019 aa26.61■■□□□ 1.85
PDXDC1-205ENST00000535621 CACNA1FO60840 1977 aa26.6■■□□□ 1.85
PDXDC1-205ENST00000535621 TNS2Q63HR2 1409 aa26.6■■□□□ 1.85
PDXDC1-205ENST00000535621 HSP90AB1P08238 724 aaKnown RBP26.6■■□□□ 1.85
PDXDC1-205ENST00000535621 HOXB7P09629 217 aa26.6■■□□□ 1.85
PDXDC1-205ENST00000535621 FAM98CQ17RN3 349 aaKnown RBP26.6■■□□□ 1.85
PDXDC1-205ENST00000535621 ZBTB7BO15156 539 aaPredicted RBP26.59■■□□□ 1.85
PDXDC1-205ENST00000535621 NKX1-1Q15270 411 aaPredicted RBP26.59■■□□□ 1.85
PDXDC1-205ENST00000535621 THRAP3Q9Y2W1 955 aaKnown RBP26.59■■□□□ 1.85
PDXDC1-205ENST00000535621 G2E3Q7L622 706 aa26.58■■□□□ 1.85
PDXDC1-205ENST00000535621 NECTIN2Q92692 538 aa26.58■■□□□ 1.85
PDXDC1-205ENST00000535621 EXOC5O00471 708 aa26.58■■□□□ 1.85
PDXDC1-205ENST00000535621 ITGB4P16144 1822 aa26.57■■□□□ 1.84
PDXDC1-205ENST00000535621 HEG1Q9ULI3 1381 aa26.57■■□□□ 1.84
PDXDC1-205ENST00000535621 CABP4P57796 275 aa26.57■■□□□ 1.84
PDXDC1-205ENST00000535621 HDGFL1Q5TGJ6 251 aa26.57■■□□□ 1.84
PDXDC1-205ENST00000535621 INTS3Q68E01 1043 aaKnown RBP26.56■■□□□ 1.84
PDXDC1-205ENST00000535621 BARGINQ6ZT62 677 aa26.56■■□□□ 1.84
PDXDC1-205ENST00000535621 CHMP4BQ9H444 224 aaKnown RBP26.56■■□□□ 1.84
PDXDC1-205ENST00000535621 GLI3P10071 1580 aa26.56■■□□□ 1.84
PDXDC1-205ENST00000535621 SKAP1Q86WV1 359 aa26.55■■□□□ 1.84
PDXDC1-205ENST00000535621 PRAMEF22A3QJZ6 481 aa26.55■■□□□ 1.84
PDXDC1-205ENST00000535621 DDB1Q16531 1140 aa26.55■■□□□ 1.84
PDXDC1-205ENST00000535621 RWDD1Q9H446 243 aaPredicted RBP26.54■■□□□ 1.84
PDXDC1-205ENST00000535621 C5P01031 1676 aa26.54■■□□□ 1.84
PDXDC1-205ENST00000535621 DOT1LQ8TEK3 1739 aa26.53■■□□□ 1.84
PDXDC1-205ENST00000535621 FLIIQ13045 1269 aa26.53■■□□□ 1.84
PDXDC1-205ENST00000535621 ZNF790Q6PG37 636 aa26.53■■□□□ 1.84
PDXDC1-205ENST00000535621 CDCA7Q9BWT1 371 aaPredicted RBP26.53■■□□□ 1.84
PDXDC1-205ENST00000535621 CHMP4AQ9BY43 222 aa26.53■■□□□ 1.84
PDXDC1-205ENST00000535621 GIGYF1O75420 1035 aaPredicted RBP26.52■■□□□ 1.84
PDXDC1-205ENST00000535621 EIF2S2P20042 333 aaKnown RBP26.51■■□□□ 1.83
PDXDC1-205ENST00000535621 HDAC1Q13547 482 aaPredicted RBP26.51■■□□□ 1.83
PDXDC1-205ENST00000535621 MARCH10Q8NA82 808 aaPredicted RBP26.51■■□□□ 1.83
PDXDC1-205ENST00000535621 ERVV-2B6SEH9 535 aa26.5■■□□□ 1.83
PDXDC1-205ENST00000535621 PAPPAQ13219 1627 aa26.49■■□□□ 1.83
PDXDC1-205ENST00000535621 ZNF496Q96IT1 587 aaPredicted RBP26.49■■□□□ 1.83
PDXDC1-205ENST00000535621 A0A0G2JS52 829 aa26.48■■□□□ 1.83
PDXDC1-205ENST00000535621 MYT1Q01538 1121 aa26.48■■□□□ 1.83
PDXDC1-205ENST00000535621 THSD7AQ9UPZ6 1657 aa26.48■■□□□ 1.83
PDXDC1-205ENST00000535621 ATRNO75882 1429 aa26.48■■□□□ 1.83
PDXDC1-205ENST00000535621 F6X3S4 739 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms