RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 CHD4Q14839 1912 aa17.96■□□□□ 0.47
CLSTN3-205ENST00000535452 GIGYF1O75420 1035 aaPredicted RBP17.95■□□□□ 0.46
CLSTN3-205ENST00000535452 ITGB4P16144 1822 aa17.94■□□□□ 0.46
CLSTN3-205ENST00000535452 TUBGCP6Q96RT7 1819 aa17.94■□□□□ 0.46
CLSTN3-205ENST00000535452 SULT6B1Q6IMI4 303 aa17.94■□□□□ 0.46
CLSTN3-205ENST00000535452 RFC4P35249 363 aa17.93■□□□□ 0.46
CLSTN3-205ENST00000535452 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
CLSTN3-205ENST00000535452 ATG3Q9NT62 314 aa17.93■□□□□ 0.46
CLSTN3-205ENST00000535452 ADRA2BP18089 450 aa17.92■□□□□ 0.46
CLSTN3-205ENST00000535452 NLGN1Q8N2Q7 840 aa17.92■□□□□ 0.46
CLSTN3-205ENST00000535452 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
CLSTN3-205ENST00000535452 TAF1LQ8IZX4 1826 aa17.9■□□□□ 0.46
CLSTN3-205ENST00000535452 COL24A1Q17RW2 1714 aa17.89■□□□□ 0.46
CLSTN3-205ENST00000535452 SENP3-EIF4A1A0A087X0R7 540 aa17.89■□□□□ 0.45
CLSTN3-205ENST00000535452 PARP3Q9Y6F1 533 aa17.89■□□□□ 0.45
CLSTN3-205ENST00000535452 PTCD1O75127 700 aaKnown RBP17.88■□□□□ 0.45
CLSTN3-205ENST00000535452 ITPK1Q13572 414 aa17.88■□□□□ 0.45
CLSTN3-205ENST00000535452 RC3H1Q5TC82 1133 aaKnown RBP17.88■□□□□ 0.45
CLSTN3-205ENST00000535452 CCDC87Q9NVE4 849 aa17.88■□□□□ 0.45
CLSTN3-205ENST00000535452 MMP10P09238 476 aa17.87■□□□□ 0.45
CLSTN3-205ENST00000535452 C1QTNF8P60827 252 aa17.87■□□□□ 0.45
CLSTN3-205ENST00000535452 AKAP4Q5JQC9 854 aa17.87■□□□□ 0.45
CLSTN3-205ENST00000535452 CNTNAP4Q9C0A0 1308 aa17.87■□□□□ 0.45
CLSTN3-205ENST00000535452 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
CLSTN3-205ENST00000535452 YBX3P16989 372 aaKnown RBP eCLIP17.86■□□□□ 0.45
CLSTN3-205ENST00000535452 CC2D1BQ5T0F9 858 aaKnown RBP17.86■□□□□ 0.45
CLSTN3-205ENST00000535452 AEBP1Q8IUX7 1158 aa17.86■□□□□ 0.45
CLSTN3-205ENST00000535452 NFATC2IPQ8NCF5 419 aa17.86■□□□□ 0.45
CLSTN3-205ENST00000535452 GPBP1L1Q9HC44 474 aaPredicted RBP17.86■□□□□ 0.45
CLSTN3-205ENST00000535452 KIF7Q2M1P5 1343 aa17.86■□□□□ 0.45
CLSTN3-205ENST00000535452 RPS6KA4O75676 772 aa17.85■□□□□ 0.45
CLSTN3-205ENST00000535452 IL13P35225 146 aa17.85■□□□□ 0.45
CLSTN3-205ENST00000535452 TGFB2P61812 414 aa17.84■□□□□ 0.45
CLSTN3-205ENST00000535452 CNGB1Q14028 1251 aaPredicted RBP17.84■□□□□ 0.45
CLSTN3-205ENST00000535452 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
CLSTN3-205ENST00000535452 CFAP53Q96M91 514 aa17.84■□□□□ 0.45
CLSTN3-205ENST00000535452 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
CLSTN3-205ENST00000535452 KDRP35968 1356 aa17.83■□□□□ 0.45
CLSTN3-205ENST00000535452 ZPR1O75312 459 aa17.83■□□□□ 0.44
CLSTN3-205ENST00000535452 AMER1Q5JTC6 1135 aaPredicted RBP17.83■□□□□ 0.44
CLSTN3-205ENST00000535452 WWC3Q9ULE0 1092 aa17.83■□□□□ 0.44
CLSTN3-205ENST00000535452 HMOX1P09601 288 aa17.82■□□□□ 0.44
CLSTN3-205ENST00000535452 SMIM5Q71RC9 77 aa17.82■□□□□ 0.44
CLSTN3-205ENST00000535452 TTC5Q8N0Z6 440 aa17.82■□□□□ 0.44
CLSTN3-205ENST00000535452 ARHGEF1Q92888 912 aaKnown RBP17.82■□□□□ 0.44
CLSTN3-205ENST00000535452 KDM6AO15550 1401 aaPredicted RBP17.81■□□□□ 0.44
CLSTN3-205ENST00000535452 U2SURPO15042 1029 aaKnown RBP17.81■□□□□ 0.44
CLSTN3-205ENST00000535452 AMIGO3Q86WK7 504 aa17.8■□□□□ 0.44
CLSTN3-205ENST00000535452 SLC52A2Q9HAB3 445 aa17.8■□□□□ 0.44
CLSTN3-205ENST00000535452 BCS1LQ9Y276 419 aa17.8■□□□□ 0.44
CLSTN3-205ENST00000535452 CRKLP46109 303 aaKnown RBP17.79■□□□□ 0.44
CLSTN3-205ENST00000535452 ZNF831Q5JPB2 1677 aa17.78■□□□□ 0.44
CLSTN3-205ENST00000535452 TEFQ10587 303 aa17.78■□□□□ 0.44
CLSTN3-205ENST00000535452 GAS2L2Q8NHY3 880 aa17.78■□□□□ 0.44
CLSTN3-205ENST00000535452 ZNF526Q8TF50 670 aaPredicted RBP17.78■□□□□ 0.44
CLSTN3-205ENST00000535452 NUDCQ9Y266 331 aa17.78■□□□□ 0.44
CLSTN3-205ENST00000535452 ATP10DQ9P241 1426 aa17.78■□□□□ 0.44
CLSTN3-205ENST00000535452 NEFMP07197 916 aa17.77■□□□□ 0.44
CLSTN3-205ENST00000535452 RNMTO43148 476 aaKnown RBP17.76■□□□□ 0.43
CLSTN3-205ENST00000535452 FCHSD2O94868 740 aa17.76■□□□□ 0.43
CLSTN3-205ENST00000535452 STARD3NLO95772 234 aa17.76■□□□□ 0.43
CLSTN3-205ENST00000535452 GYS1P13807 737 aa17.76■□□□□ 0.43
CLSTN3-205ENST00000535452 CICQ96RK0 1608 aaPredicted RBP17.76■□□□□ 0.43
CLSTN3-205ENST00000535452 ARHGAP27Q6ZUM4 889 aa17.75■□□□□ 0.43
CLSTN3-205ENST00000535452 SLC4A9Q96Q91 983 aa17.75■□□□□ 0.43
CLSTN3-205ENST00000535452 A0A0G2JLW4 131 aa17.74■□□□□ 0.43
CLSTN3-205ENST00000535452 PIM2Q9P1W9 311 aa17.74■□□□□ 0.43
CLSTN3-205ENST00000535452 NPC1L1Q9UHC9 1359 aa17.74■□□□□ 0.43
CLSTN3-205ENST00000535452 USP42Q9H9J4 1324 aaKnown RBP17.73■□□□□ 0.43
CLSTN3-205ENST00000535452 MTHFSDQ2M296 383 aaKnown RBP17.73■□□□□ 0.43
CLSTN3-205ENST00000535452 DNAJC10Q8IXB1 793 aa17.73■□□□□ 0.43
CLSTN3-205ENST00000535452 VSIG10Q8N0Z9 540 aa17.73■□□□□ 0.43
CLSTN3-205ENST00000535452 TEX13AQ9BXU3 409 aaPredicted RBP17.73■□□□□ 0.43
CLSTN3-205ENST00000535452 A0A087WZG4 1122 aa17.72■□□□□ 0.43
CLSTN3-205ENST00000535452 GNAT3A8MTJ3 354 aa17.72■□□□□ 0.43
CLSTN3-205ENST00000535452 NPHP1O15259 732 aa17.72■□□□□ 0.43
CLSTN3-205ENST00000535452 PER1O15534 1290 aaPredicted RBP17.72■□□□□ 0.43
CLSTN3-205ENST00000535452 LGR6Q9HBX8 967 aa17.72■□□□□ 0.43
CLSTN3-205ENST00000535452 C10orf71Q711Q0 1435 aa17.72■□□□□ 0.43
CLSTN3-205ENST00000535452 DPEP1P16444 411 aa17.71■□□□□ 0.43
CLSTN3-205ENST00000535452 DALRD3Q5D0E6 543 aaKnown RBP17.71■□□□□ 0.43
CLSTN3-205ENST00000535452 RTF1Q92541 710 aaKnown RBP17.71■□□□□ 0.43
CLSTN3-205ENST00000535452 COL5A3P25940 1745 aaPredicted RBP17.71■□□□□ 0.43
CLSTN3-205ENST00000535452 PXDNLA1KZ92 1463 aa17.7■□□□□ 0.42
CLSTN3-205ENST00000535452 C4AP0C0L4 1744 aa17.7■□□□□ 0.42
CLSTN3-205ENST00000535452 SLC39A6Q13433 755 aa17.7■□□□□ 0.42
CLSTN3-205ENST00000535452 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
CLSTN3-205ENST00000535452 SRP68Q9UHB9 627 aaKnown RBP17.7■□□□□ 0.42
CLSTN3-205ENST00000535452 ZNF330Q9Y3S2 320 aaPredicted RBP17.7■□□□□ 0.42
CLSTN3-205ENST00000535452 SCN11AQ9UI33 1791 aa17.7■□□□□ 0.42
CLSTN3-205ENST00000535452 FKBP8Q14318 412 aa17.69■□□□□ 0.42
CLSTN3-205ENST00000535452 USPL1Q5W0Q7 1092 aa17.69■□□□□ 0.42
CLSTN3-205ENST00000535452 UTRNP46939 3433 aa17.69■□□□□ 0.42
CLSTN3-205ENST00000535452 CANXP27824 592 aaKnown RBP17.68■□□□□ 0.42
CLSTN3-205ENST00000535452 INTS5Q6P9B9 1019 aaKnown RBP17.68■□□□□ 0.42
CLSTN3-205ENST00000535452 NARFQ9UHQ1 456 aa17.68■□□□□ 0.42
CLSTN3-205ENST00000535452 SOS1Q07889 1333 aaPredicted RBP17.68■□□□□ 0.42
CLSTN3-205ENST00000535452 COL15A1P39059 1388 aa17.67■□□□□ 0.42
CLSTN3-205ENST00000535452 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
CLSTN3-205ENST00000535452 FMNL2Q96PY5 1086 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms