RNA–Protein interactions for RNA: ENST00000534938.6

FCF1-202, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3 BASIC

Gene FCF1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-202ENST00000534938 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
FCF1-202ENST00000534938 PARP3Q9Y6F1 533 aa14.03□□□□□ -0.16
FCF1-202ENST00000534938 KDM2BQ8NHM5 1336 aa14.02□□□□□ -0.17
FCF1-202ENST00000534938 FCHSD2O94868 740 aa14.02□□□□□ -0.17
FCF1-202ENST00000534938 RFC4P35249 363 aa14.02□□□□□ -0.17
FCF1-202ENST00000534938 IFNL2Q8IZJ0 200 aa14.02□□□□□ -0.17
FCF1-202ENST00000534938 LINC00116Q8NCU8 138 aa14.02□□□□□ -0.17
FCF1-202ENST00000534938 TESK2Q96S53 571 aa14.02□□□□□ -0.17
FCF1-202ENST00000534938 UBR3Q6ZT12 1888 aa14.01□□□□□ -0.17
FCF1-202ENST00000534938 NKX1-1Q15270 411 aaPredicted RBP14.01□□□□□ -0.17
FCF1-202ENST00000534938 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.01□□□□□ -0.17
FCF1-202ENST00000534938 ITGB4P16144 1822 aa14.01□□□□□ -0.17
FCF1-202ENST00000534938 PLEKHG2Q9H7P9 1386 aa14□□□□□ -0.17
FCF1-202ENST00000534938 KIF20BQ96Q89 1820 aa14□□□□□ -0.17
FCF1-202ENST00000534938 A0A0G2JLW4 131 aa14□□□□□ -0.17
FCF1-202ENST00000534938 SMIM5Q71RC9 77 aa14□□□□□ -0.17
FCF1-202ENST00000534938 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
FCF1-202ENST00000534938 HSP90AB1P08238 724 aaKnown RBP13.99□□□□□ -0.17
FCF1-202ENST00000534938 RBM46Q8TBY0 533 aaKnown RBP13.99□□□□□ -0.17
FCF1-202ENST00000534938 ASAP1Q9ULH1 1129 aa13.99□□□□□ -0.17
FCF1-202ENST00000534938 GOLGB1Q14789 3259 aaKnown RBP13.99□□□□□ -0.17
FCF1-202ENST00000534938 PKD1L3Q7Z443 1732 aa13.98□□□□□ -0.17
FCF1-202ENST00000534938 CICQ96RK0 1608 aaPredicted RBP13.98□□□□□ -0.17
FCF1-202ENST00000534938 FSTL1Q12841 308 aa13.98□□□□□ -0.17
FCF1-202ENST00000534938 AMIGO3Q86WK7 504 aa13.98□□□□□ -0.17
FCF1-202ENST00000534938 EMILIN1Q9Y6C2 1016 aa13.98□□□□□ -0.17
FCF1-202ENST00000534938 PXDNLA1KZ92 1463 aa13.98□□□□□ -0.17
FCF1-202ENST00000534938 ITPK1Q13572 414 aa13.97□□□□□ -0.17
FCF1-202ENST00000534938 NMRK2Q9NPI5 230 aa13.97□□□□□ -0.17
FCF1-202ENST00000534938 PIM2Q9P1W9 311 aa13.97□□□□□ -0.17
FCF1-202ENST00000534938 TOGARAM1Q9Y4F4 1720 aa13.97□□□□□ -0.17
FCF1-202ENST00000534938 PHKG2P15735 406 aa13.96□□□□□ -0.17
FCF1-202ENST00000534938 DPEP1P16444 411 aa13.96□□□□□ -0.17
FCF1-202ENST00000534938 C9orf131Q5VYM1 1079 aa13.96□□□□□ -0.17
FCF1-202ENST00000534938 WASHC2AQ641Q2 1341 aa13.95□□□□□ -0.18
FCF1-202ENST00000534938 CABP4P57796 275 aa13.95□□□□□ -0.18
FCF1-202ENST00000534938 DALRD3Q5D0E6 543 aaKnown RBP13.95□□□□□ -0.18
FCF1-202ENST00000534938 KLRG1Q96E93 195 aa13.95□□□□□ -0.18
FCF1-202ENST00000534938 ATG3Q9NT62 314 aa13.95□□□□□ -0.18
FCF1-202ENST00000534938 N4BP2Q86UW6 1770 aaPredicted RBP13.94□□□□□ -0.18
FCF1-202ENST00000534938 CEP350Q5VT06 3117 aa13.94□□□□□ -0.18
FCF1-202ENST00000534938 ERVV-2B6SEH9 535 aa13.94□□□□□ -0.18
FCF1-202ENST00000534938 CAPN15O75808 1086 aa13.94□□□□□ -0.18
FCF1-202ENST00000534938 RC3H1Q5TC82 1133 aaKnown RBP13.94□□□□□ -0.18
FCF1-202ENST00000534938 C10orf71Q711Q0 1435 aa13.94□□□□□ -0.18
FCF1-202ENST00000534938 DNAJC5GQ8N7S2 189 aa13.94□□□□□ -0.18
FCF1-202ENST00000534938 ARHGEF1Q92888 912 aaKnown RBP13.94□□□□□ -0.18
FCF1-202ENST00000534938 DCAF5Q96JK2 942 aa13.94□□□□□ -0.18
FCF1-202ENST00000534938 EYA1Q99502 592 aa13.94□□□□□ -0.18
FCF1-202ENST00000534938 RNF181Q9P0P0 153 aa13.94□□□□□ -0.18
FCF1-202ENST00000534938 RPS6KA4O75676 772 aa13.93□□□□□ -0.18
FCF1-202ENST00000534938 PLEKHO1Q53GL0 409 aaPredicted RBP13.93□□□□□ -0.18
FCF1-202ENST00000534938 C1orf141Q5JVX7 400 aa13.93□□□□□ -0.18
FCF1-202ENST00000534938 TNS4Q8IZW8 715 aa13.93□□□□□ -0.18
FCF1-202ENST00000534938 SMC1BQ8NDV3 1235 aa13.93□□□□□ -0.18
FCF1-202ENST00000534938 WDR90Q96KV7 1748 aa13.93□□□□□ -0.18
FCF1-202ENST00000534938 CNTNAP4Q9C0A0 1308 aa13.92□□□□□ -0.18
FCF1-202ENST00000534938 KIF13BQ9NQT8 1826 aa13.92□□□□□ -0.18
FCF1-202ENST00000534938 C4AP0C0L4 1744 aa13.92□□□□□ -0.18
FCF1-202ENST00000534938 MAP2P11137 1827 aaKnown RBP13.92□□□□□ -0.18
FCF1-202ENST00000534938 GYS1P13807 737 aa13.91□□□□□ -0.18
FCF1-202ENST00000534938 AMOTQ4VCS5 1084 aa13.91□□□□□ -0.18
FCF1-202ENST00000534938 NCAPD2Q15021 1401 aa13.9□□□□□ -0.18
FCF1-202ENST00000534938 ZPR1O75312 459 aa13.9□□□□□ -0.18
FCF1-202ENST00000534938 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
FCF1-202ENST00000534938 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
FCF1-202ENST00000534938 RRAGCQ9HB90 399 aa13.9□□□□□ -0.18
FCF1-202ENST00000534938 PTCD1O75127 700 aaKnown RBP13.89□□□□□ -0.19
FCF1-202ENST00000534938 MTHFSP49914 203 aa13.89□□□□□ -0.19
FCF1-202ENST00000534938 ZNF530Q6P9A1 599 aaPredicted RBP13.89□□□□□ -0.19
FCF1-202ENST00000534938 JMYQ8N9B5 988 aa13.89□□□□□ -0.19
FCF1-202ENST00000534938 KCPQ6ZWJ8 1503 aa13.89□□□□□ -0.19
FCF1-202ENST00000534938 KDRP35968 1356 aa13.88□□□□□ -0.19
FCF1-202ENST00000534938 COL13A1Q5TAT6 717 aaPredicted RBP13.88□□□□□ -0.19
FCF1-202ENST00000534938 ZNF831Q5JPB2 1677 aa13.88□□□□□ -0.19
FCF1-202ENST00000534938 ZC3H4Q9UPT8 1303 aaKnown RBP13.88□□□□□ -0.19
FCF1-202ENST00000534938 CRKLP46109 303 aaKnown RBP13.87□□□□□ -0.19
FCF1-202ENST00000534938 HTRA3P83110 453 aa13.87□□□□□ -0.19
FCF1-202ENST00000534938 EIF4A2Q14240 407 aaKnown RBP13.87□□□□□ -0.19
FCF1-202ENST00000534938 CARD14Q9BXL6 1004 aa13.87□□□□□ -0.19
FCF1-202ENST00000534938 POLKQ9UBT6 870 aa13.87□□□□□ -0.19
FCF1-202ENST00000534938 TNRC6CQ9HCJ0 1690 aaKnown RBP13.87□□□□□ -0.19
FCF1-202ENST00000534938 ARFGEF1Q9Y6D6 1849 aa13.86□□□□□ -0.19
FCF1-202ENST00000534938 VEGFAP15692 232 aaPredicted RBP13.86□□□□□ -0.19
FCF1-202ENST00000534938 ANKRD26Q9UPS8 1709 aa13.86□□□□□ -0.19
FCF1-202ENST00000534938 USP42Q9H9J4 1324 aaKnown RBP13.86□□□□□ -0.19
FCF1-202ENST00000534938 KIAA1551Q9HCM1 1747 aa13.85□□□□□ -0.19
FCF1-202ENST00000534938 DPY19L2Q6NUT2 758 aa13.85□□□□□ -0.19
FCF1-202ENST00000534938 LMNB1P20700 586 aa13.84□□□□□ -0.19
FCF1-202ENST00000534938 KCNA3P22001 575 aa13.84□□□□□ -0.19
FCF1-202ENST00000534938 CHRNA5P30532 468 aa13.84□□□□□ -0.19
FCF1-202ENST00000534938 PRELPP51888 382 aa13.84□□□□□ -0.19
FCF1-202ENST00000534938 FKBP8Q14318 412 aa13.84□□□□□ -0.19
FCF1-202ENST00000534938 COL5A3P25940 1745 aaPredicted RBP13.84□□□□□ -0.19
FCF1-202ENST00000534938 NFATC2IPQ8NCF5 419 aa13.83□□□□□ -0.2
FCF1-202ENST00000534938 SLC4A9Q96Q91 983 aa13.83□□□□□ -0.2
FCF1-202ENST00000534938 SRP68Q9UHB9 627 aaKnown RBP13.83□□□□□ -0.2
FCF1-202ENST00000534938 BRCA1P38398 1863 aaKnown RBP13.82□□□□□ -0.2
FCF1-202ENST00000534938 GLTPD2A6NH11 291 aa13.81□□□□□ -0.2
FCF1-202ENST00000534938 H0YIN7 160 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms