RNA–Protein interactions for RNA: ENST00000534788.1

UPK2-202, Transcript of uroplakin 2, humanhuman

TSL 3

Gene UPK2, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-202ENST00000534788 COL5A3P25940 1745 aaPredicted RBP18.57■□□□□ 0.56
UPK2-202ENST00000534788 ZNF831Q5JPB2 1677 aa18.57■□□□□ 0.56
UPK2-202ENST00000534788 ASAP1Q9ULH1 1129 aa18.56■□□□□ 0.56
UPK2-202ENST00000534788 WDR90Q96KV7 1748 aa18.56■□□□□ 0.56
UPK2-202ENST00000534788 C4AP0C0L4 1744 aa18.55■□□□□ 0.56
UPK2-202ENST00000534788 MMP10P09238 476 aa18.55■□□□□ 0.56
UPK2-202ENST00000534788 APLP1P51693 650 aa18.55■□□□□ 0.56
UPK2-202ENST00000534788 SPG7Q9UQ90 795 aa18.55■□□□□ 0.56
UPK2-202ENST00000534788 C10orf71Q711Q0 1435 aa18.55■□□□□ 0.56
UPK2-202ENST00000534788 ARFGEF1Q9Y6D6 1849 aa18.54■□□□□ 0.56
UPK2-202ENST00000534788 ATP6V1AP38606 617 aa18.54■□□□□ 0.56
UPK2-202ENST00000534788 TMOD3Q9NYL9 352 aa18.54■□□□□ 0.56
UPK2-202ENST00000534788 TOMM70O94826 608 aa18.53■□□□□ 0.56
UPK2-202ENST00000534788 DNAJC5GQ8N7S2 189 aa18.53■□□□□ 0.56
UPK2-202ENST00000534788 KDRP35968 1356 aa18.53■□□□□ 0.56
UPK2-202ENST00000534788 TGFB2P61812 414 aa18.52■□□□□ 0.56
UPK2-202ENST00000534788 CARD14Q9BXL6 1004 aa18.52■□□□□ 0.56
UPK2-202ENST00000534788 ATG3Q9NT62 314 aa18.52■□□□□ 0.56
UPK2-202ENST00000534788 BCS1LQ9Y276 419 aa18.52■□□□□ 0.56
UPK2-202ENST00000534788 A0A0G2JLW4 131 aa18.51■□□□□ 0.55
UPK2-202ENST00000534788 PHKG2P15735 406 aa18.51■□□□□ 0.55
UPK2-202ENST00000534788 EYA1Q99502 592 aa18.51■□□□□ 0.55
UPK2-202ENST00000534788 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.51■□□□□ 0.55
UPK2-202ENST00000534788 NMRK2Q9NPI5 230 aa18.5■□□□□ 0.55
UPK2-202ENST00000534788 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
UPK2-202ENST00000534788 PPM1GO15355 546 aaPredicted RBP18.49■□□□□ 0.55
UPK2-202ENST00000534788 IFNL2Q8IZJ0 200 aa18.49■□□□□ 0.55
UPK2-202ENST00000534788 MYH14Q7Z406 1995 aaKnown RBP18.48■□□□□ 0.55
UPK2-202ENST00000534788 SLC4A9Q96Q91 983 aa18.48■□□□□ 0.55
UPK2-202ENST00000534788 RTCBQ9Y3I0 505 aaKnown RBP18.48■□□□□ 0.55
UPK2-202ENST00000534788 DPEP1P16444 411 aa18.47■□□□□ 0.55
UPK2-202ENST00000534788 TRAPPC3LQ5T215 181 aa18.47■□□□□ 0.55
UPK2-202ENST00000534788 ARHGAP27Q6ZUM4 889 aa18.47■□□□□ 0.55
UPK2-202ENST00000534788 NLGN1Q8N2Q7 840 aa18.47■□□□□ 0.55
UPK2-202ENST00000534788 ARHGEF1Q92888 912 aaKnown RBP18.46■□□□□ 0.55
UPK2-202ENST00000534788 FCHSD2O94868 740 aa18.45■□□□□ 0.54
UPK2-202ENST00000534788 HSPA5P11021 654 aaKnown RBP18.45■□□□□ 0.54
UPK2-202ENST00000534788 GYS1P13807 737 aa18.45■□□□□ 0.54
UPK2-202ENST00000534788 CCDC87Q9NVE4 849 aa18.45■□□□□ 0.54
UPK2-202ENST00000534788 SBF1O95248 1867 aa18.45■□□□□ 0.54
UPK2-202ENST00000534788 TNRC6CQ9HCJ0 1690 aaKnown RBP18.44■□□□□ 0.54
UPK2-202ENST00000534788 ADRA2BP18089 450 aa18.44■□□□□ 0.54
UPK2-202ENST00000534788 KCNA3P22001 575 aa18.44■□□□□ 0.54
UPK2-202ENST00000534788 RBM46Q8TBY0 533 aaKnown RBP18.44■□□□□ 0.54
UPK2-202ENST00000534788 CNTNAP4Q9C0A0 1308 aa18.44■□□□□ 0.54
UPK2-202ENST00000534788 PLEKHG2Q9H7P9 1386 aa18.43■□□□□ 0.54
UPK2-202ENST00000534788 RC3H1Q5TC82 1133 aaKnown RBP18.43■□□□□ 0.54
UPK2-202ENST00000534788 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
UPK2-202ENST00000534788 KCPQ6ZWJ8 1503 aa18.43■□□□□ 0.54
UPK2-202ENST00000534788 TJP1Q07157 1748 aa18.43■□□□□ 0.54
UPK2-202ENST00000534788 HTRA3P83110 453 aa18.42■□□□□ 0.54
UPK2-202ENST00000534788 C9orf131Q5VYM1 1079 aa18.42■□□□□ 0.54
UPK2-202ENST00000534788 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
UPK2-202ENST00000534788 ADAMTS7Q9UKP4 1686 aa18.41■□□□□ 0.54
UPK2-202ENST00000534788 RPS6KA4O75676 772 aa18.41■□□□□ 0.54
UPK2-202ENST00000534788 RFC4P35249 363 aa18.41■□□□□ 0.54
UPK2-202ENST00000534788 EIF4A2Q14240 407 aaKnown RBP18.41■□□□□ 0.54
UPK2-202ENST00000534788 PARP3Q9Y6F1 533 aa18.41■□□□□ 0.54
UPK2-202ENST00000534788 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
UPK2-202ENST00000534788 ERVV-2B6SEH9 535 aa18.4■□□□□ 0.54
UPK2-202ENST00000534788 KLRG1Q96E93 195 aa18.4■□□□□ 0.54
UPK2-202ENST00000534788 JMYQ8N9B5 988 aa18.39■□□□□ 0.53
UPK2-202ENST00000534788 DCAF5Q96JK2 942 aa18.39■□□□□ 0.53
UPK2-202ENST00000534788 FSTL1Q12841 308 aa18.38■□□□□ 0.53
UPK2-202ENST00000534788 C16orf71Q8IYS4 520 aaPredicted RBP18.38■□□□□ 0.53
UPK2-202ENST00000534788 PIM2Q9P1W9 311 aa18.38■□□□□ 0.53
UPK2-202ENST00000534788 COL13A1Q5TAT6 717 aaPredicted RBP18.37■□□□□ 0.53
UPK2-202ENST00000534788 HSP90AB1P08238 724 aaKnown RBP18.36■□□□□ 0.53
UPK2-202ENST00000534788 DDR1Q08345 913 aa18.36■□□□□ 0.53
UPK2-202ENST00000534788 KDM2BQ8NHM5 1336 aa18.36■□□□□ 0.53
UPK2-202ENST00000534788 SCN11AQ9UI33 1791 aa18.35■□□□□ 0.53
UPK2-202ENST00000534788 DLEC1Q9Y238 1755 aa18.35■□□□□ 0.53
UPK2-202ENST00000534788 USP42Q9H9J4 1324 aaKnown RBP18.35■□□□□ 0.53
UPK2-202ENST00000534788 FKBP8Q14318 412 aa18.35■□□□□ 0.53
UPK2-202ENST00000534788 DALRD3Q5D0E6 543 aaKnown RBP18.35■□□□□ 0.53
UPK2-202ENST00000534788 RNF181Q9P0P0 153 aa18.35■□□□□ 0.53
UPK2-202ENST00000534788 SRP68Q9UHB9 627 aaKnown RBP18.35■□□□□ 0.53
UPK2-202ENST00000534788 AFDNP55196 1824 aaKnown RBP18.35■□□□□ 0.53
UPK2-202ENST00000534788 CRKLP46109 303 aaKnown RBP18.34■□□□□ 0.53
UPK2-202ENST00000534788 RRAGCQ9HB90 399 aa18.34■□□□□ 0.53
UPK2-202ENST00000534788 CHRNA5P30532 468 aa18.33■□□□□ 0.52
UPK2-202ENST00000534788 TNNT2P45379 298 aaPredicted RBP18.33■□□□□ 0.52
UPK2-202ENST00000534788 CABP4P57796 275 aa18.33■□□□□ 0.52
UPK2-202ENST00000534788 TIAM2Q8IVF5 1701 aa18.32■□□□□ 0.52
UPK2-202ENST00000534788 NRXN2Q9P2S2 1712 aa18.32■□□□□ 0.52
UPK2-202ENST00000534788 PTCD1O75127 700 aaKnown RBP18.32■□□□□ 0.52
UPK2-202ENST00000534788 PLEKHO1Q53GL0 409 aaPredicted RBP18.32■□□□□ 0.52
UPK2-202ENST00000534788 ZNF530Q6P9A1 599 aaPredicted RBP18.32■□□□□ 0.52
UPK2-202ENST00000534788 POLR3GLQ9BT43 218 aa18.32■□□□□ 0.52
UPK2-202ENST00000534788 CCDC88AQ3V6T2 1871 aa18.32■□□□□ 0.52
UPK2-202ENST00000534788 VIRMAQ69YN4 1812 aaKnown RBP18.32■□□□□ 0.52
UPK2-202ENST00000534788 POLRMTO00411 1230 aaKnown RBP18.3■□□□□ 0.52
UPK2-202ENST00000534788 AMOTQ4VCS5 1084 aa18.3■□□□□ 0.52
UPK2-202ENST00000534788 TM4SF1P30408 202 aa18.29■□□□□ 0.52
UPK2-202ENST00000534788 MTHFSP49914 203 aa18.29■□□□□ 0.52
UPK2-202ENST00000534788 SMC1BQ8NDV3 1235 aa18.29■□□□□ 0.52
UPK2-202ENST00000534788 RASSF7Q02833 373 aa18.28■□□□□ 0.52
UPK2-202ENST00000534788 INTS5Q6P9B9 1019 aaKnown RBP18.28■□□□□ 0.52
UPK2-202ENST00000534788 AEBP1Q8IUX7 1158 aa18.28■□□□□ 0.52
UPK2-202ENST00000534788 NFATC2IPQ8NCF5 419 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms