RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 MTHFSP49914 203 aa25.6■■□□□ 1.69
NDUFS3-213ENST00000534716 ITPK1Q13572 414 aa25.6■■□□□ 1.69
NDUFS3-213ENST00000534716 AMIGO3Q86WK7 504 aa25.6■■□□□ 1.69
NDUFS3-213ENST00000534716 ATP6V1AP38606 617 aa25.59■■□□□ 1.69
NDUFS3-213ENST00000534716 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.58■■□□□ 1.69
NDUFS3-213ENST00000534716 C1orf141Q5JVX7 400 aa25.57■■□□□ 1.68
NDUFS3-213ENST00000534716 MSL1Q68DK7 614 aa25.57■■□□□ 1.68
NDUFS3-213ENST00000534716 ZNF831Q5JPB2 1677 aa25.57■■□□□ 1.68
NDUFS3-213ENST00000534716 UBR3Q6ZT12 1888 aa25.56■■□□□ 1.68
NDUFS3-213ENST00000534716 CABP4P57796 275 aa25.55■■□□□ 1.68
NDUFS3-213ENST00000534716 KLHL34Q8N239 644 aa25.55■■□□□ 1.68
NDUFS3-213ENST00000534716 NLGN2Q8NFZ4 835 aa25.55■■□□□ 1.68
NDUFS3-213ENST00000534716 SLC4A9Q96Q91 983 aa25.55■■□□□ 1.68
NDUFS3-213ENST00000534716 CC2D1BQ5T0F9 858 aaKnown RBP25.54■■□□□ 1.68
NDUFS3-213ENST00000534716 PHF14O94880 888 aa25.53■■□□□ 1.68
NDUFS3-213ENST00000534716 GPR162Q16538 588 aa25.53■■□□□ 1.68
NDUFS3-213ENST00000534716 CD2APQ9Y5K6 639 aa25.53■■□□□ 1.68
NDUFS3-213ENST00000534716 GNPATO15228 680 aa25.52■■□□□ 1.68
NDUFS3-213ENST00000534716 AKAP4Q5JQC9 854 aa25.52■■□□□ 1.68
NDUFS3-213ENST00000534716 RC3H1Q5TC82 1133 aaKnown RBP25.52■■□□□ 1.68
NDUFS3-213ENST00000534716 DIAPH1O60610 1272 aaKnown RBP25.51■■□□□ 1.67
NDUFS3-213ENST00000534716 SMIM5Q71RC9 77 aa25.51■■□□□ 1.67
NDUFS3-213ENST00000534716 NFATC2IPQ8NCF5 419 aa25.5■■□□□ 1.67
NDUFS3-213ENST00000534716 RBM42Q9BTD8 480 aaKnown RBP25.5■■□□□ 1.67
NDUFS3-213ENST00000534716 CNTNAP4Q9C0A0 1308 aa25.49■■□□□ 1.67
NDUFS3-213ENST00000534716 SENP3-EIF4A1A0A087X0R7 540 aa25.48■■□□□ 1.67
NDUFS3-213ENST00000534716 ZNF784Q8NCA9 323 aaPredicted RBP25.48■■□□□ 1.67
NDUFS3-213ENST00000534716 RTCBQ9Y3I0 505 aaKnown RBP25.47■■□□□ 1.67
NDUFS3-213ENST00000534716 COL3A1P02461 1466 aaPredicted RBP25.47■■□□□ 1.67
NDUFS3-213ENST00000534716 HMOX1P09601 288 aa25.46■■□□□ 1.67
NDUFS3-213ENST00000534716 ADRA2BP18089 450 aa25.46■■□□□ 1.67
NDUFS3-213ENST00000534716 TRAPPC3LQ5T215 181 aa25.45■■□□□ 1.66
NDUFS3-213ENST00000534716 COL5A3P25940 1745 aaPredicted RBP25.45■■□□□ 1.66
NDUFS3-213ENST00000534716 GRIN3BO60391 1043 aa25.44■■□□□ 1.66
NDUFS3-213ENST00000534716 RPS6KA4O75676 772 aa25.44■■□□□ 1.66
NDUFS3-213ENST00000534716 SLC52A2Q9HAB3 445 aa25.44■■□□□ 1.66
NDUFS3-213ENST00000534716 MRC1P22897 1456 aa25.43■■□□□ 1.66
NDUFS3-213ENST00000534716 YBX3P16989 372 aaKnown RBP eCLIP25.43■■□□□ 1.66
NDUFS3-213ENST00000534716 LGR6Q9HBX8 967 aa25.43■■□□□ 1.66
NDUFS3-213ENST00000534716 CICQ96RK0 1608 aaPredicted RBP25.43■■□□□ 1.66
NDUFS3-213ENST00000534716 SCN11AQ9UI33 1791 aa25.43■■□□□ 1.66
NDUFS3-213ENST00000534716 CHD4Q14839 1912 aa25.42■■□□□ 1.66
NDUFS3-213ENST00000534716 RNMTO43148 476 aaKnown RBP25.42■■□□□ 1.66
NDUFS3-213ENST00000534716 PTCD1O75127 700 aaKnown RBP25.42■■□□□ 1.66
NDUFS3-213ENST00000534716 MTHFSDQ2M296 383 aaKnown RBP25.42■■□□□ 1.66
NDUFS3-213ENST00000534716 PELP1Q8IZL8 1130 aaKnown RBP25.42■■□□□ 1.66
NDUFS3-213ENST00000534716 ARHGEF1Q92888 912 aaKnown RBP25.41■■□□□ 1.66
NDUFS3-213ENST00000534716 ADAMTS7Q9UKP4 1686 aa25.4■■□□□ 1.66
NDUFS3-213ENST00000534716 NLGN1Q8N2Q7 840 aa25.4■■□□□ 1.66
NDUFS3-213ENST00000534716 CRKLP46109 303 aaKnown RBP25.38■■□□□ 1.65
NDUFS3-213ENST00000534716 MMP10P09238 476 aa25.37■■□□□ 1.65
NDUFS3-213ENST00000534716 GYS1P13807 737 aa25.36■■□□□ 1.65
NDUFS3-213ENST00000534716 RFC4P35249 363 aa25.36■■□□□ 1.65
NDUFS3-213ENST00000534716 TJP1Q07157 1748 aa25.35■■□□□ 1.65
NDUFS3-213ENST00000534716 C1QTNF8P60827 252 aa25.35■■□□□ 1.65
NDUFS3-213ENST00000534716 U2SURPO15042 1029 aaKnown RBP25.34■■□□□ 1.65
NDUFS3-213ENST00000534716 MYH14Q7Z406 1995 aaKnown RBP25.33■■□□□ 1.65
NDUFS3-213ENST00000534716 CNGB1Q14028 1251 aaPredicted RBP25.33■■□□□ 1.65
NDUFS3-213ENST00000534716 INTS5Q6P9B9 1019 aaKnown RBP25.33■■□□□ 1.65
NDUFS3-213ENST00000534716 IFFO2Q5TF58 517 aa25.32■■□□□ 1.64
NDUFS3-213ENST00000534716 VSIG10Q8N0Z9 540 aa25.32■■□□□ 1.64
NDUFS3-213ENST00000534716 GAS2L2Q8NHY3 880 aa25.32■■□□□ 1.64
NDUFS3-213ENST00000534716 CFAP53Q96M91 514 aa25.32■■□□□ 1.64
NDUFS3-213ENST00000534716 KCPQ6ZWJ8 1503 aa25.32■■□□□ 1.64
NDUFS3-213ENST00000534716 SLC39A6Q13433 755 aa25.31■■□□□ 1.64
NDUFS3-213ENST00000534716 TGFB2P61812 414 aa25.3■■□□□ 1.64
NDUFS3-213ENST00000534716 DNAJC10Q8IXB1 793 aa25.3■■□□□ 1.64
NDUFS3-213ENST00000534716 CCDC87Q9NVE4 849 aa25.3■■□□□ 1.64
NDUFS3-213ENST00000534716 USP42Q9H9J4 1324 aaKnown RBP25.3■■□□□ 1.64
NDUFS3-213ENST00000534716 C10orf71Q711Q0 1435 aa25.29■■□□□ 1.64
NDUFS3-213ENST00000534716 C4AP0C0L4 1744 aa25.29■■□□□ 1.64
NDUFS3-213ENST00000534716 GNAT3A8MTJ3 354 aa25.29■■□□□ 1.64
NDUFS3-213ENST00000534716 CYP19A1P11511 503 aaPredicted RBP25.29■■□□□ 1.64
NDUFS3-213ENST00000534716 PPP2R1AP30153 589 aa25.29■■□□□ 1.64
NDUFS3-213ENST00000534716 KIF13BQ9NQT8 1826 aa25.28■■□□□ 1.64
NDUFS3-213ENST00000534716 IL17REQ8NFR9 667 aa25.28■■□□□ 1.64
NDUFS3-213ENST00000534716 RSPH6AQ9H0K4 717 aa25.27■■□□□ 1.64
NDUFS3-213ENST00000534716 NUDCQ9Y266 331 aa25.27■■□□□ 1.64
NDUFS3-213ENST00000534716 PARP3Q9Y6F1 533 aa25.27■■□□□ 1.64
NDUFS3-213ENST00000534716 PXDNLA1KZ92 1463 aa25.27■■□□□ 1.64
NDUFS3-213ENST00000534716 SRP68Q9UHB9 627 aaKnown RBP25.26■■□□□ 1.63
NDUFS3-213ENST00000534716 SOS1Q07889 1333 aaPredicted RBP25.26■■□□□ 1.63
NDUFS3-213ENST00000534716 CEMIPQ8WUJ3 1361 aa25.25■■□□□ 1.63
NDUFS3-213ENST00000534716 FKBP8Q14318 412 aa25.24■■□□□ 1.63
NDUFS3-213ENST00000534716 PHACTR3Q96KR7 559 aa25.24■■□□□ 1.63
NDUFS3-213ENST00000534716 VIRMAQ69YN4 1812 aaKnown RBP25.23■■□□□ 1.63
NDUFS3-213ENST00000534716 UBR2Q8IWV8 1755 aa25.23■■□□□ 1.63
NDUFS3-213ENST00000534716 PRKAR2BP31323 418 aa25.23■■□□□ 1.63
NDUFS3-213ENST00000534716 TEFQ10587 303 aa25.23■■□□□ 1.63
NDUFS3-213ENST00000534716 KIAA1551Q9HCM1 1747 aa25.23■■□□□ 1.63
NDUFS3-213ENST00000534716 ZNF790Q6PG37 636 aa25.22■■□□□ 1.63
NDUFS3-213ENST00000534716 TTC5Q8N0Z6 440 aa25.22■■□□□ 1.63
NDUFS3-213ENST00000534716 FCHSD2O94868 740 aa25.21■■□□□ 1.63
NDUFS3-213ENST00000534716 TM4SF1P30408 202 aa25.21■■□□□ 1.63
NDUFS3-213ENST00000534716 ADCY9O60503 1353 aa25.2■■□□□ 1.63
NDUFS3-213ENST00000534716 ZPR1O75312 459 aa25.2■■□□□ 1.62
NDUFS3-213ENST00000534716 ZBTB1Q9Y2K1 713 aa25.2■■□□□ 1.62
NDUFS3-213ENST00000534716 COL15A1P39059 1388 aa25.19■■□□□ 1.62
NDUFS3-213ENST00000534716 A0A0G2JLW4 131 aa25.19■■□□□ 1.62
NDUFS3-213ENST00000534716 STARD3NLO95772 234 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms