RNA–Protein interactions for RNA: ENST00000534455.5

SC5D-209, Transcript of sterol-C5-desaturase, humanhuman

TSL 2

Gene SC5D, Length 921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SC5D-209ENST00000534455 MTHFSP49914 203 aa21.86■■□□□ 1.09
SC5D-209ENST00000534455 CABP4P57796 275 aa21.86■■□□□ 1.09
SC5D-209ENST00000534455 AEBP1Q8IUX7 1158 aa21.86■■□□□ 1.09
SC5D-209ENST00000534455 LINC00116Q8NCU8 138 aa21.86■■□□□ 1.09
SC5D-209ENST00000534455 ATG3Q9NT62 314 aa21.86■■□□□ 1.09
SC5D-209ENST00000534455 COL24A1Q17RW2 1714 aa21.86■■□□□ 1.09
SC5D-209ENST00000534455 GNPATO15228 680 aa21.85■■□□□ 1.09
SC5D-209ENST00000534455 SSFA2P28290 1259 aa21.85■■□□□ 1.09
SC5D-209ENST00000534455 NLGN2Q8NFZ4 835 aa21.85■■□□□ 1.09
SC5D-209ENST00000534455 RBM42Q9BTD8 480 aaKnown RBP21.85■■□□□ 1.09
SC5D-209ENST00000534455 IL13P35225 146 aa21.83■■□□□ 1.09
SC5D-209ENST00000534455 CC2D1BQ5T0F9 858 aaKnown RBP21.83■■□□□ 1.09
SC5D-209ENST00000534455 ITPK1Q13572 414 aa21.82■■□□□ 1.08
SC5D-209ENST00000534455 SMIM5Q71RC9 77 aa21.81■■□□□ 1.08
SC5D-209ENST00000534455 ZNF784Q8NCA9 323 aaPredicted RBP21.81■■□□□ 1.08
SC5D-209ENST00000534455 CD2APQ9Y5K6 639 aa21.81■■□□□ 1.08
SC5D-209ENST00000534455 CHD4Q14839 1912 aa21.8■■□□□ 1.08
SC5D-209ENST00000534455 GRIN3BO60391 1043 aa21.8■■□□□ 1.08
SC5D-209ENST00000534455 CNGB1Q14028 1251 aaPredicted RBP21.8■■□□□ 1.08
SC5D-209ENST00000534455 AMIGO3Q86WK7 504 aa21.8■■□□□ 1.08
SC5D-209ENST00000534455 RTCBQ9Y3I0 505 aaKnown RBP21.79■■□□□ 1.08
SC5D-209ENST00000534455 UBR3Q6ZT12 1888 aa21.78■■□□□ 1.08
SC5D-209ENST00000534455 TRAPPC3LQ5T215 181 aa21.78■■□□□ 1.08
SC5D-209ENST00000534455 KDRP35968 1356 aa21.77■■□□□ 1.08
SC5D-209ENST00000534455 GOLGB1Q14789 3259 aaKnown RBP21.77■■□□□ 1.08
SC5D-209ENST00000534455 ZNF316A6NFI3 1004 aaPredicted RBP21.77■■□□□ 1.08
SC5D-209ENST00000534455 PER1O15534 1290 aaPredicted RBP21.77■■□□□ 1.08
SC5D-209ENST00000534455 NFATC2IPQ8NCF5 419 aa21.77■■□□□ 1.08
SC5D-209ENST00000534455 KDM6AO15550 1401 aaPredicted RBP21.77■■□□□ 1.08
SC5D-209ENST00000534455 DIAPH1O60610 1272 aaKnown RBP21.76■■□□□ 1.07
SC5D-209ENST00000534455 PTCD1O75127 700 aaKnown RBP21.76■■□□□ 1.07
SC5D-209ENST00000534455 AKAP4Q5JQC9 854 aa21.76■■□□□ 1.07
SC5D-209ENST00000534455 HMOX1P09601 288 aa21.75■■□□□ 1.07
SC5D-209ENST00000534455 RC3H1Q5TC82 1133 aaKnown RBP21.74■■□□□ 1.07
SC5D-209ENST00000534455 YBX3P16989 372 aaKnown RBP eCLIP21.73■■□□□ 1.07
SC5D-209ENST00000534455 SLC4A9Q96Q91 983 aa21.73■■□□□ 1.07
SC5D-209ENST00000534455 RFC4P35249 363 aa21.72■■□□□ 1.07
SC5D-209ENST00000534455 CNTNAP4Q9C0A0 1308 aa21.72■■□□□ 1.07
SC5D-209ENST00000534455 NLGN1Q8N2Q7 840 aa21.71■■□□□ 1.07
SC5D-209ENST00000534455 RPS6KA4O75676 772 aa21.7■■□□□ 1.06
SC5D-209ENST00000534455 MMP10P09238 476 aa21.7■■□□□ 1.06
SC5D-209ENST00000534455 ARHGEF1Q92888 912 aaKnown RBP21.7■■□□□ 1.06
SC5D-209ENST00000534455 U2SURPO15042 1029 aaKnown RBP21.69■■□□□ 1.06
SC5D-209ENST00000534455 NPC1L1Q9UHC9 1359 aa21.69■■□□□ 1.06
SC5D-209ENST00000534455 SLC52A2Q9HAB3 445 aa21.68■■□□□ 1.06
SC5D-209ENST00000534455 ZNF831Q5JPB2 1677 aa21.68■■□□□ 1.06
SC5D-209ENST00000534455 RNMTO43148 476 aaKnown RBP21.67■■□□□ 1.06
SC5D-209ENST00000534455 CRKLP46109 303 aaKnown RBP21.67■■□□□ 1.06
SC5D-209ENST00000534455 LGR6Q9HBX8 967 aa21.67■■□□□ 1.06
SC5D-209ENST00000534455 MTHFSDQ2M296 383 aaKnown RBP21.66■■□□□ 1.06
SC5D-209ENST00000534455 WWC3Q9ULE0 1092 aa21.66■■□□□ 1.06
SC5D-209ENST00000534455 CFAP53Q96M91 514 aa21.65■■□□□ 1.06
SC5D-209ENST00000534455 PARP3Q9Y6F1 533 aa21.65■■□□□ 1.06
SC5D-209ENST00000534455 SCN11AQ9UI33 1791 aa21.64■■□□□ 1.06
SC5D-209ENST00000534455 CCDC87Q9NVE4 849 aa21.64■■□□□ 1.05
SC5D-209ENST00000534455 GYS1P13807 737 aa21.63■■□□□ 1.05
SC5D-209ENST00000534455 COL5A3P25940 1745 aaPredicted RBP21.63■■□□□ 1.05
SC5D-209ENST00000534455 SLC39A6Q13433 755 aa21.62■■□□□ 1.05
SC5D-209ENST00000534455 GIGYF1O75420 1035 aaPredicted RBP21.61■■□□□ 1.05
SC5D-209ENST00000534455 GAS2L2Q8NHY3 880 aa21.61■■□□□ 1.05
SC5D-209ENST00000534455 TGFB2P61812 414 aa21.6■■□□□ 1.05
SC5D-209ENST00000534455 DNAJC10Q8IXB1 793 aa21.6■■□□□ 1.05
SC5D-209ENST00000534455 TTC5Q8N0Z6 440 aa21.6■■□□□ 1.05
SC5D-209ENST00000534455 NUDCQ9Y266 331 aa21.6■■□□□ 1.05
SC5D-209ENST00000534455 CICQ96RK0 1608 aaPredicted RBP21.59■■□□□ 1.05
SC5D-209ENST00000534455 ZPR1O75312 459 aa21.59■■□□□ 1.05
SC5D-209ENST00000534455 MYH14Q7Z406 1995 aaKnown RBP21.59■■□□□ 1.05
SC5D-209ENST00000534455 GNAT3A8MTJ3 354 aa21.58■■□□□ 1.05
SC5D-209ENST00000534455 C1QTNF8P60827 252 aa21.58■■□□□ 1.05
SC5D-209ENST00000534455 TEFQ10587 303 aa21.58■■□□□ 1.05
SC5D-209ENST00000534455 DDX10Q13206 875 aaKnown RBP21.58■■□□□ 1.05
SC5D-209ENST00000534455 INTS5Q6P9B9 1019 aaKnown RBP21.58■■□□□ 1.05
SC5D-209ENST00000534455 SRP68Q9UHB9 627 aaKnown RBP21.58■■□□□ 1.05
SC5D-209ENST00000534455 MRC1P22897 1456 aa21.57■■□□□ 1.04
SC5D-209ENST00000534455 USP42Q9H9J4 1324 aaKnown RBP21.56■■□□□ 1.04
SC5D-209ENST00000534455 A0A0G2JLW4 131 aa21.56■■□□□ 1.04
SC5D-209ENST00000534455 VSIG10Q8N0Z9 540 aa21.56■■□□□ 1.04
SC5D-209ENST00000534455 BCS1LQ9Y276 419 aa21.56■■□□□ 1.04
SC5D-209ENST00000534455 COL3A1P02461 1466 aaPredicted RBP21.56■■□□□ 1.04
SC5D-209ENST00000534455 TJP1Q07157 1748 aa21.55■■□□□ 1.04
SC5D-209ENST00000534455 CYP19A1P11511 503 aaPredicted RBP21.55■■□□□ 1.04
SC5D-209ENST00000534455 FKBP8Q14318 412 aa21.55■■□□□ 1.04
SC5D-209ENST00000534455 GPBP1L1Q9HC44 474 aaPredicted RBP21.54■■□□□ 1.04
SC5D-209ENST00000534455 C4AP0C0L4 1744 aa21.54■■□□□ 1.04
SC5D-209ENST00000534455 C10orf71Q711Q0 1435 aa21.54■■□□□ 1.04
SC5D-209ENST00000534455 ATP10DQ9P241 1426 aa21.54■■□□□ 1.04
SC5D-209ENST00000534455 PXDNLA1KZ92 1463 aa21.53■■□□□ 1.04
SC5D-209ENST00000534455 STARD3NLO95772 234 aa21.53■■□□□ 1.04
SC5D-209ENST00000534455 U2AF1L5P0DN76 240 aaPredicted RBP21.53■■□□□ 1.04
SC5D-209ENST00000534455 DPEP1P16444 411 aa21.53■■□□□ 1.04
SC5D-209ENST00000534455 PRKAR2BP31323 418 aa21.53■■□□□ 1.04
SC5D-209ENST00000534455 U2AF1Q01081 240 aaKnown RBP eCLIP21.53■■□□□ 1.04
SC5D-209ENST00000534455 USPL1Q5W0Q7 1092 aa21.53■■□□□ 1.04
SC5D-209ENST00000534455 SOS1Q07889 1333 aaPredicted RBP21.53■■□□□ 1.04
SC5D-209ENST00000534455 SENP3-EIF4A1A0A087X0R7 540 aa21.52■■□□□ 1.04
SC5D-209ENST00000534455 VIRMAQ69YN4 1812 aaKnown RBP21.52■■□□□ 1.04
SC5D-209ENST00000534455 FCHSD2O94868 740 aa21.51■■□□□ 1.03
SC5D-209ENST00000534455 CANXP27824 592 aaKnown RBP21.51■■□□□ 1.03
SC5D-209ENST00000534455 PPP2R1AP30153 589 aa21.51■■□□□ 1.03
SC5D-209ENST00000534455 POTEDQ86YR6 584 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms