RNA–Protein interactions for RNA: ENST00000534283.1

RELA-223, Transcript of RELA proto-oncogene, NF-kB subunit, human

TSL 5

Gene RELA, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RELA-223	ENST00000534283	HSP90AB1	P08238	724 aa	Known RBP	33.14	■■■□□ 2.9
RELA-223	ENST00000534283	SSFA2	P28290	1259 aa		33.13	■■■□□ 2.89
RELA-223	ENST00000534283	ATP6V1A	P38606	617 aa		33.13	■■■□□ 2.89
RELA-223	ENST00000534283	SLC4A9	Q96Q91	983 aa		33.13	■■■□□ 2.89
RELA-223	ENST00000534283	PHF14	O94880	888 aa		33.12	■■■□□ 2.89
RELA-223	ENST00000534283	ZNF530	Q6P9A1	599 aa	Predicted RBP	33.12	■■■□□ 2.89
RELA-223	ENST00000534283	SULT6B1	Q6IMI4	303 aa		33.11	■■■□□ 2.89
RELA-223	ENST00000534283	CD2AP	Q9Y5K6	639 aa		33.11	■■■□□ 2.89
RELA-223	ENST00000534283	TAF1L	Q8IZX4	1826 aa		33.11	■■■□□ 2.89
RELA-223	ENST00000534283	KDM6A	O15550	1401 aa	Predicted RBP	33.11	■■■□□ 2.89
RELA-223	ENST00000534283	KDR	P35968	1356 aa		33.1	■■■□□ 2.89
RELA-223	ENST00000534283	YBX3	P16989	372 aa	Known RBP eCLIP	33.08	■■■□□ 2.89
RELA-223	ENST00000534283	GNPAT	O15228	680 aa		33.07	■■■□□ 2.88
RELA-223	ENST00000534283	PELP1	Q8IZL8	1130 aa	Known RBP	33.07	■■■□□ 2.88
RELA-223	ENST00000534283	MTHFS	P49914	203 aa		33.05	■■■□□ 2.88
RELA-223	ENST00000534283	CABP4	P57796	275 aa		33.05	■■■□□ 2.88
RELA-223	ENST00000534283	GOLGB1	Q14789	3259 aa	Known RBP	33.03	■■■□□ 2.88
RELA-223	ENST00000534283	C1orf141	Q5JVX7	400 aa		33.02	■■■□□ 2.88
RELA-223	ENST00000534283	RBM42	Q9BTD8	480 aa	Known RBP	33.02	■■■□□ 2.88
RELA-223	ENST00000534283	GRIN3B	O60391	1043 aa		33.01	■■■□□ 2.87
RELA-223	ENST00000534283	RC3H1	Q5TC82	1133 aa	Known RBP	33.01	■■■□□ 2.87
RELA-223	ENST00000534283	UBR3	Q6ZT12	1888 aa		33.01	■■■□□ 2.87
RELA-223	ENST00000534283	NFATC2IP	Q8NCF5	419 aa		32.99	■■■□□ 2.87
RELA-223	ENST00000534283	CC2D1B	Q5T0F9	858 aa	Known RBP	32.96	■■■□□ 2.87
RELA-223	ENST00000534283	TRAPPC3L	Q5T215	181 aa		32.96	■■■□□ 2.87
RELA-223	ENST00000534283	RTCB	Q9Y3I0	505 aa	Known RBP	32.96	■■■□□ 2.87
RELA-223	ENST00000534283	CNTNAP4	Q9C0A0	1308 aa		32.96	■■■□□ 2.87
RELA-223	ENST00000534283	AKAP4	Q5JQC9	854 aa		32.94	■■■□□ 2.86
RELA-223	ENST00000534283	ARHGEF1	Q92888	912 aa	Known RBP	32.94	■■■□□ 2.86
RELA-223	ENST00000534283	RPS6KA4	O75676	772 aa		32.93	■■■□□ 2.86
RELA-223	ENST00000534283	PTCD1	O75127	700 aa	Known RBP	32.92	■■■□□ 2.86
RELA-223	ENST00000534283	ADRA2B	P18089	450 aa		32.92	■■■□□ 2.86
RELA-223	ENST00000534283	NPC1L1	Q9UHC9	1359 aa		32.92	■■■□□ 2.86
RELA-223	ENST00000534283	ZNF831	Q5JPB2	1677 aa		32.91	■■■□□ 2.86
RELA-223	ENST00000534283	MMP10	P09238	476 aa		32.91	■■■□□ 2.86
RELA-223	ENST00000534283	HMOX1	P09601	288 aa		32.91	■■■□□ 2.86
RELA-223	ENST00000534283	LGR6	Q9HBX8	967 aa		32.91	■■■□□ 2.86
RELA-223	ENST00000534283	DIAPH1	O60610	1272 aa	Known RBP	32.9	■■■□□ 2.86
RELA-223	ENST00000534283	CHD4	Q14839	1912 aa		32.9	■■■□□ 2.86
RELA-223	ENST00000534283	NLGN1	Q8N2Q7	840 aa		32.88	■■■□□ 2.85
RELA-223	ENST00000534283	SLC52A2	Q9HAB3	445 aa		32.87	■■■□□ 2.85
RELA-223	ENST00000534283	GYS1	P13807	737 aa		32.86	■■■□□ 2.85
RELA-223	ENST00000534283	MTHFSD	Q2M296	383 aa	Known RBP	32.86	■■■□□ 2.85
RELA-223	ENST00000534283	RNMT	O43148	476 aa	Known RBP	32.85	■■■□□ 2.85
RELA-223	ENST00000534283	CRKL	P46109	303 aa	Known RBP	32.85	■■■□□ 2.85
RELA-223	ENST00000534283	RFC4	P35249	363 aa		32.83	■■■□□ 2.85
RELA-223	ENST00000534283	INTS5	Q6P9B9	1019 aa	Known RBP	32.82	■■■□□ 2.84
RELA-223	ENST00000534283	COL3A1	P02461	1466 aa	Predicted RBP	32.8	■■■□□ 2.84
RELA-223	ENST00000534283	C1QTNF8	P60827	252 aa		32.8	■■■□□ 2.84
RELA-223	ENST00000534283	COL5A3	P25940	1745 aa	Predicted RBP	32.8	■■■□□ 2.84
RELA-223	ENST00000534283	WWC3	Q9ULE0	1092 aa		32.79	■■■□□ 2.84
RELA-223	ENST00000534283	DNAJC10	Q8IXB1	793 aa		32.78	■■■□□ 2.84
RELA-223	ENST00000534283	MRC1	P22897	1456 aa		32.78	■■■□□ 2.84
RELA-223	ENST00000534283	TGFB2	P61812	414 aa		32.77	■■■□□ 2.84
RELA-223	ENST00000534283	SLC39A6	Q13433	755 aa		32.77	■■■□□ 2.84
RELA-223	ENST00000534283	CNGB1	Q14028	1251 aa	Predicted RBP	32.76	■■■□□ 2.83
RELA-223	ENST00000534283	SRP68	Q9UHB9	627 aa	Known RBP	32.76	■■■□□ 2.83
RELA-223	ENST00000534283	PXDNL	A1KZ92	1463 aa		32.75	■■■□□ 2.83
RELA-223	ENST00000534283	C10orf71	Q711Q0	1435 aa		32.75	■■■□□ 2.83
RELA-223	ENST00000534283	MYH14	Q7Z406	1995 aa	Known RBP	32.74	■■■□□ 2.83
RELA-223	ENST00000534283	USP42	Q9H9J4	1324 aa	Known RBP	32.74	■■■□□ 2.83
RELA-223	ENST00000534283	CYP19A1	P11511	503 aa	Predicted RBP	32.73	■■■□□ 2.83
RELA-223	ENST00000534283	FKBP8	Q14318	412 aa		32.73	■■■□□ 2.83
RELA-223	ENST00000534283	SCN11A	Q9UI33	1791 aa		32.73	■■■□□ 2.83
RELA-223	ENST00000534283	CCDC87	Q9NVE4	849 aa		32.72	■■■□□ 2.83
RELA-223	ENST00000534283	PARP3	Q9Y6F1	533 aa		32.72	■■■□□ 2.83
RELA-223	ENST00000534283	CIC	Q96RK0	1608 aa	Predicted RBP	32.72	■■■□□ 2.83
RELA-223	ENST00000534283	ADCY9	O60503	1353 aa		32.71	■■■□□ 2.83
RELA-223	ENST00000534283	ATP10D	Q9P241	1426 aa		32.71	■■■□□ 2.83
RELA-223	ENST00000534283		A0A0G2JLW4	131 aa		32.71	■■■□□ 2.83
RELA-223	ENST00000534283	U2SURP	O15042	1029 aa	Known RBP	32.71	■■■□□ 2.83
RELA-223	ENST00000534283	GIGYF1	O75420	1035 aa	Predicted RBP	32.71	■■■□□ 2.83
RELA-223	ENST00000534283	TJP1	Q07157	1748 aa		32.7	■■■□□ 2.83
RELA-223	ENST00000534283	ADAMTS7	Q9UKP4	1686 aa		32.69	■■■□□ 2.82
RELA-223	ENST00000534283	IL17RE	Q8NFR9	667 aa		32.69	■■■□□ 2.82
RELA-223	ENST00000534283	SOS1	Q07889	1333 aa	Predicted RBP	32.69	■■■□□ 2.82
RELA-223	ENST00000534283	KCP	Q6ZWJ8	1503 aa		32.68	■■■□□ 2.82
RELA-223	ENST00000534283	DPEP1	P16444	411 aa		32.68	■■■□□ 2.82
RELA-223	ENST00000534283	DDR1	Q08345	913 aa		32.68	■■■□□ 2.82
RELA-223	ENST00000534283	VSIG10	Q8N0Z9	540 aa		32.68	■■■□□ 2.82
RELA-223	ENST00000534283	TM4SF1	P30408	202 aa		32.67	■■■□□ 2.82
RELA-223	ENST00000534283	KCNA3	P22001	575 aa		32.66	■■■□□ 2.82
RELA-223	ENST00000534283	GAS2L2	Q8NHY3	880 aa		32.65	■■■□□ 2.82
RELA-223	ENST00000534283	C4A	P0C0L4	1744 aa		32.64	■■■□□ 2.82
RELA-223	ENST00000534283	GNAT3	A8MTJ3	354 aa		32.63	■■■□□ 2.81
RELA-223	ENST00000534283	PHACTR3	Q96KR7	559 aa		32.63	■■■□□ 2.81
RELA-223	ENST00000534283	ZBTB1	Q9Y2K1	713 aa		32.63	■■■□□ 2.81
RELA-223	ENST00000534283	KIF13B	Q9NQT8	1826 aa		32.63	■■■□□ 2.81
RELA-223	ENST00000534283	KIAA1551	Q9HCM1	1747 aa		32.63	■■■□□ 2.81
RELA-223	ENST00000534283	USPL1	Q5W0Q7	1092 aa		32.62	■■■□□ 2.81
RELA-223	ENST00000534283	BCS1L	Q9Y276	419 aa		32.62	■■■□□ 2.81
RELA-223	ENST00000534283	POLRMT	O00411	1230 aa	Known RBP	32.61	■■■□□ 2.81
RELA-223	ENST00000534283	RSPH6A	Q9H0K4	717 aa		32.61	■■■□□ 2.81
RELA-223	ENST00000534283	ZPR1	O75312	459 aa		32.6	■■■□□ 2.81
RELA-223	ENST00000534283	PPP2R1A	P30153	589 aa		32.6	■■■□□ 2.81
RELA-223	ENST00000534283	NARF	Q9UHQ1	456 aa		32.6	■■■□□ 2.81
RELA-223	ENST00000534283	SENP3-EIF4A1	A0A087X0R7	540 aa		32.59	■■■□□ 2.81
RELA-223	ENST00000534283	CFAP53	Q96M91	514 aa		32.59	■■■□□ 2.81
RELA-223	ENST00000534283	ZNF496	Q96IT1	587 aa	Predicted RBP	32.58	■■■□□ 2.81
RELA-223	ENST00000534283	BCL2L12	Q9HB09	334 aa		32.58	■■■□□ 2.81

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms