RNA–Protein interactions for RNA: ENST00000533894.5

PPFIA1-224, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-224ENST00000533894 TOPBP1Q92547 1522 aa6.3□□□□□ -1.4
PPFIA1-224ENST00000533894 ATP5J2-PTCD1G3V325 749 aa6.3□□□□□ -1.4
PPFIA1-224ENST00000533894 NCOA4Q13772 614 aa6.3□□□□□ -1.4
PPFIA1-224ENST00000533894 KANK4Q5T7N3 995 aaPredicted RBP6.3□□□□□ -1.4
PPFIA1-224ENST00000533894 LARP1Q6PKG0 1096 aaKnown RBP6.3□□□□□ -1.4
PPFIA1-224ENST00000533894 TRIM47Q96LD4 638 aa6.3□□□□□ -1.4
PPFIA1-224ENST00000533894 PCDHGA11Q9Y5H2 935 aa6.3□□□□□ -1.4
PPFIA1-224ENST00000533894 SOS2Q07890 1332 aaPredicted RBP6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 A0A1W2PRU2 124 aa6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 C11orf95C9JLR9 678 aaPredicted RBP6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 UPP2O95045 317 aa6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 MYCP01106 439 aaPredicted RBP6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 TRIM50Q86XT4 487 aa6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 TRIM52Q96A61 297 aa6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 INSM2Q96T92 566 aaPredicted RBP6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 SENP2Q9HC62 589 aa6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 NOD1Q9Y239 953 aa6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 TOP2AP11388 1531 aaKnown RBP6.29□□□□□ -1.4
PPFIA1-224ENST00000533894 ZBTB7BO15156 539 aaPredicted RBP6.28□□□□□ -1.4
PPFIA1-224ENST00000533894 STAU1O95793 577 aaKnown RBP6.28□□□□□ -1.4
PPFIA1-224ENST00000533894 RASA1P20936 1047 aa6.28□□□□□ -1.4
PPFIA1-224ENST00000533894 CTSOP43234 321 aaPredicted RBP6.28□□□□□ -1.4
PPFIA1-224ENST00000533894 TRIM26Q12899 539 aaPredicted RBP6.28□□□□□ -1.4
PPFIA1-224ENST00000533894 CYP2U1Q7Z449 544 aa6.28□□□□□ -1.4
PPFIA1-224ENST00000533894 AEBP1Q8IUX7 1158 aa6.28□□□□□ -1.4
PPFIA1-224ENST00000533894 SIRT1Q96EB6 747 aa6.28□□□□□ -1.4
PPFIA1-224ENST00000533894 ESF1Q9H501 851 aaKnown RBP6.28□□□□□ -1.4
PPFIA1-224ENST00000533894 TARBP1Q13395 1621 aaKnown RBP6.28□□□□□ -1.4
PPFIA1-224ENST00000533894 AQRO60306 1485 aaKnown RBP eCLIP6.28□□□□□ -1.45e-6■■■■□ 19.7
PPFIA1-224ENST00000533894 ABCC8Q09428 1581 aa6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 FAM196BA6NMK8 535 aa6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 SOBPA7XYQ1 873 aa6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 GNRH1P01148 92 aa6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 ATP1A2P50993 1020 aa6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 ELOAQ14241 798 aaKnown RBP6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 KIFC2Q96AC6 838 aa6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 XAGE2Q96GT9 111 aa6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 NOVA2Q9UNW9 492 aaKnown RBP6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 RBM19Q9Y4C8 960 aaKnown RBP6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 HRH3Q9Y5N1 445 aa6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 SYNJ1O43426 1573 aa6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 DNMBPQ6XZF7 1577 aa6.27□□□□□ -1.41
PPFIA1-224ENST00000533894 CLASP1Q7Z460 1538 aa6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 FIGNL2A6NMB9 653 aa6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 TTLL8A6PVC2 850 aa6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 IL2RAP01589 272 aa6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 RNF144AP50876 292 aaPredicted RBP6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 SCNN1DP51172 638 aa6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 CLN3Q13286 438 aa6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 FOXD4L5Q5VV16 416 aaPredicted RBP6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 ARHGEF10LQ9HCE6 1279 aa6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 RAB6BQ9NRW1 208 aa6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 DNAAF2Q9NVR5 837 aaKnown RBP6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 PODXL2Q9NZ53 605 aa6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 DNMT3LQ9UJW3 386 aa6.26□□□□□ -1.41
PPFIA1-224ENST00000533894 TMEM229AB2RXF0 380 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L15C9J2P7 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 PATL2C9JE40 543 aaKnown RBP6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L10C9JJH3 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L13C9JLJ4 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L12C9JPN9 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L11C9JVI0 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L21D6R901 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L18D6R9N7 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L22D6RA61 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L17D6RBQ6 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L19D6RCP7 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L20D6RJB6 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 MEN1O00255 615 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 GTF2IP78347 998 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 CLDN10P78369 228 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 USP17L24Q0WX57 530 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 CRTC2Q53ET0 693 aaPredicted RBP6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 B4GALNT3Q6L9W6 998 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 OGFOD1Q8N543 542 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 FAM200AQ8TCP9 573 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 ETNK1Q9HBU6 452 aa6.25□□□□□ -1.41
PPFIA1-224ENST00000533894 DKK1O94907 266 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 BRD1O95696 1058 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 CENPCQ03188 943 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 PSME1Q06323 249 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 PTK7Q13308 1070 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 ANKMY2Q8IV38 441 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 LARGE2Q8N3Y3 721 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 RNF217Q8TC41 542 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 CNKSR1Q969H4 720 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 ZNF594Q96JF6 807 aaPredicted RBP6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 ESYT1Q9BSJ8 1104 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 GRIP2Q9C0E4 1043 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 POLMQ9NP87 494 aaPredicted RBP6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 KIAA1024Q9UPX6 916 aa6.24□□□□□ -1.41
PPFIA1-224ENST00000533894 INHAP05111 366 aa6.23□□□□□ -1.41
PPFIA1-224ENST00000533894 TMEM164Q5U3C3 297 aa6.23□□□□□ -1.41
PPFIA1-224ENST00000533894 STK32AQ8WU08 396 aa6.23□□□□□ -1.41
PPFIA1-224ENST00000533894 FHDC1Q9C0D6 1143 aaPredicted RBP6.23□□□□□ -1.41
PPFIA1-224ENST00000533894 ZMIZ1Q9ULJ6 1067 aa6.23□□□□□ -1.41
PPFIA1-224ENST00000533894 GAPVD1Q14C86 1478 aa6.22□□□□□ -1.41
PPFIA1-224ENST00000533894 SNAPC4Q5SXM2 1469 aa6.22□□□□□ -1.41
PPFIA1-224ENST00000533894 CARNS1A5YM72 827 aa6.22□□□□□ -1.41
PPFIA1-224ENST00000533894 TMEM88BA6NKF7 163 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms