RNA–Protein interactions for RNA: ENST00000533894.5

PPFIA1-224, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 4

Gene PPFIA1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-224ENST00000533894 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
PPFIA1-224ENST00000533894 CHIC1Q5VXU3 224 aa16.89■□□□□ 0.29
PPFIA1-224ENST00000533894 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
PPFIA1-224ENST00000533894 SENP3Q9H4L4 574 aaPredicted RBP14.62□□□□□ -0.07
PPFIA1-224ENST00000533894 PLPPR3Q6T4P5 718 aa13.67□□□□□ -0.22
PPFIA1-224ENST00000533894 FOXD1Q16676 465 aa13.64□□□□□ -0.23
PPFIA1-224ENST00000533894 PPP6R1Q9UPN7 881 aa13.17□□□□□ -0.3
PPFIA1-224ENST00000533894 ADRA2BP18089 450 aa13.12□□□□□ -0.31
PPFIA1-224ENST00000533894 PIAS4Q8N2W9 510 aaPredicted RBP12.8□□□□□ -0.36
PPFIA1-224ENST00000533894 MSH5O43196 834 aa12.5□□□□□ -0.41
PPFIA1-224ENST00000533894 PPP4R3CPQ6ZMV5 832 aa12.08□□□□□ -0.48
PPFIA1-224ENST00000533894 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
PPFIA1-224ENST00000533894 SCAF1Q9H7N4 1312 aaKnown RBP11.92□□□□□ -0.5
PPFIA1-224ENST00000533894 KCNA4P22459 653 aa11.81□□□□□ -0.52
PPFIA1-224ENST00000533894 CNKSR2Q8WXI2 1034 aa11.71□□□□□ -0.53
PPFIA1-224ENST00000533894 NCBP3Q53F19 620 aaKnown RBP11.7□□□□□ -0.54
PPFIA1-224ENST00000533894 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
PPFIA1-224ENST00000533894 NPM3O75607 178 aaKnown RBP11.59□□□□□ -0.55
PPFIA1-224ENST00000533894 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
PPFIA1-224ENST00000533894 HOXD11P31277 338 aaPredicted RBP11.47□□□□□ -0.57
PPFIA1-224ENST00000533894 POTEDQ86YR6 584 aa11.45□□□□□ -0.58
PPFIA1-224ENST00000533894 DNAJC5BQ9UF47 199 aa11.26□□□□□ -0.61
PPFIA1-224ENST00000533894 SLC4A1APQ9BWU0 796 aaKnown RBP11.2□□□□□ -0.62
PPFIA1-224ENST00000533894 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.62
PPFIA1-224ENST00000533894 SLC4A2P04920 1241 aa10.98□□□□□ -0.65
PPFIA1-224ENST00000533894 ZBTB22O15209 634 aa10.9□□□□□ -0.66
PPFIA1-224ENST00000533894 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.89□□□□□ -0.672e-7■■■■□ 20.2
PPFIA1-224ENST00000533894 EHMT2Q96KQ7 1210 aa10.87□□□□□ -0.67
PPFIA1-224ENST00000533894 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
PPFIA1-224ENST00000533894 FOXD4L1Q9NU39 408 aa10.82□□□□□ -0.68
PPFIA1-224ENST00000533894 RNF39Q9H2S5 420 aa10.76□□□□□ -0.69
PPFIA1-224ENST00000533894 U3KPZ7 1027 aaPredicted RBP10.75□□□□□ -0.69
PPFIA1-224ENST00000533894 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
PPFIA1-224ENST00000533894 C1QBPQ07021 282 aaKnown RBP10.6□□□□□ -0.71
PPFIA1-224ENST00000533894 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
PPFIA1-224ENST00000533894 HNRNPUL2Q1KMD3 747 aaKnown RBP10.53□□□□□ -0.72
PPFIA1-224ENST00000533894 SAMD1Q6SPF0 538 aaPredicted RBP10.52□□□□□ -0.73
PPFIA1-224ENST00000533894 SPINK5Q9NQ38 1064 aaPredicted RBP10.47□□□□□ -0.73
PPFIA1-224ENST00000533894 ATF5Q9Y2D1 282 aaPredicted RBP10.47□□□□□ -0.73
PPFIA1-224ENST00000533894 ATXN8OSP0DMR3 200 aa10.45□□□□□ -0.74
PPFIA1-224ENST00000533894 CACNB1Q02641 598 aaPredicted RBP10.45□□□□□ -0.74
PPFIA1-224ENST00000533894 APLP2Q06481 763 aa10.39□□□□□ -0.75
PPFIA1-224ENST00000533894 CAPN15O75808 1086 aa10.37□□□□□ -0.75
PPFIA1-224ENST00000533894 TRHP20396 242 aaPredicted RBP10.33□□□□□ -0.76
PPFIA1-224ENST00000533894 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
PPFIA1-224ENST00000533894 DSG3P32926 999 aa10.25□□□□□ -0.77
PPFIA1-224ENST00000533894 ABCB7O75027 752 aa10.19□□□□□ -0.78
PPFIA1-224ENST00000533894 POLA2Q14181 598 aa10.19□□□□□ -0.78
PPFIA1-224ENST00000533894 MKRN4PQ13434 485 aaPredicted RBP10.01□□□□□ -0.81
PPFIA1-224ENST00000533894 ZBTB12Q9Y330 459 aaPredicted RBP9.94□□□□□ -0.82
PPFIA1-224ENST00000533894 FBLN2P98095 1184 aa9.91□□□□□ -0.82
PPFIA1-224ENST00000533894 OSCARQ8IYS5 282 aa9.81□□□□□ -0.84
PPFIA1-224ENST00000533894 SPDYE4A6NLX3 237 aa9.72□□□□□ -0.85
PPFIA1-224ENST00000533894 FKBP8Q14318 412 aa9.72□□□□□ -0.85
PPFIA1-224ENST00000533894 SPDYE2BA6NHP3 402 aa9.71□□□□□ -0.86
PPFIA1-224ENST00000533894 SPDYE6P0CI01 402 aa9.71□□□□□ -0.86
PPFIA1-224ENST00000533894 SPDYE2Q495Y8 402 aa9.71□□□□□ -0.86
PPFIA1-224ENST00000533894 ZNF692Q9BU19 519 aaPredicted RBP9.69□□□□□ -0.86
PPFIA1-224ENST00000533894 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
PPFIA1-224ENST00000533894 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
PPFIA1-224ENST00000533894 PROM2Q8N271 834 aa9.6□□□□□ -0.87
PPFIA1-224ENST00000533894 AKT1S1Q96B36 256 aa9.6□□□□□ -0.87
PPFIA1-224ENST00000533894 PABPN1Q86U42 306 aaKnown RBP eCLIP9.57□□□□□ -0.88
PPFIA1-224ENST00000533894 REM2Q8IYK8 340 aaPredicted RBP9.54□□□□□ -0.88
PPFIA1-224ENST00000533894 PITPNM1O00562 1244 aa9.42□□□□□ -0.9
PPFIA1-224ENST00000533894 SPDYE1Q8NFV5 336 aaPredicted RBP9.42□□□□□ -0.9
PPFIA1-224ENST00000533894 CLEC11AQ9Y240 323 aa9.38□□□□□ -0.91
PPFIA1-224ENST00000533894 STAG3Q9UJ98 1225 aa9.37□□□□□ -0.91
PPFIA1-224ENST00000533894 FBXO3Q9UK99 471 aa9.34□□□□□ -0.91
PPFIA1-224ENST00000533894 CHRDL2Q6WN34 429 aa9.32□□□□□ -0.92
PPFIA1-224ENST00000533894 PRR29P0C7W0 189 aa9.3□□□□□ -0.92
PPFIA1-224ENST00000533894 FXR2P51116 673 aaKnown RBP eCLIP9.27□□□□□ -0.932e-8■■■■□ 23.7
PPFIA1-224ENST00000533894 VASPP50552 380 aaPredicted RBP9.25□□□□□ -0.93
PPFIA1-224ENST00000533894 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
PPFIA1-224ENST00000533894 CREBZFQ9NS37 354 aa9.23□□□□□ -0.93
PPFIA1-224ENST00000533894 MIER1Q8N108 512 aa9.22□□□□□ -0.93
PPFIA1-224ENST00000533894 CHADLQ6NUI6 762 aa9.2□□□□□ -0.94
PPFIA1-224ENST00000533894 PRKAR2AP13861 404 aaKnown RBP9.18□□□□□ -0.94
PPFIA1-224ENST00000533894 AMER1Q5JTC6 1135 aaPredicted RBP9.17□□□□□ -0.94
PPFIA1-224ENST00000533894 IFNLR1Q8IU57 520 aaPredicted RBP9.17□□□□□ -0.94
PPFIA1-224ENST00000533894 PLCD3Q8N3E9 789 aa9.17□□□□□ -0.94
PPFIA1-224ENST00000533894 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
PPFIA1-224ENST00000533894 RTN4Q9NQC3 1192 aaKnown RBP9.1□□□□□ -0.95
PPFIA1-224ENST00000533894 FARP1Q9Y4F1 1045 aaPredicted RBP9.1□□□□□ -0.95
PPFIA1-224ENST00000533894 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
PPFIA1-224ENST00000533894 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
PPFIA1-224ENST00000533894 POTEHQ6S545 545 aa9.05□□□□□ -0.96
PPFIA1-224ENST00000533894 NUBP1P53384 320 aa9.03□□□□□ -0.96
PPFIA1-224ENST00000533894 ZBTB47Q9UFB7 747 aaPredicted RBP9.03□□□□□ -0.96
PPFIA1-224ENST00000533894 NPM1P06748 294 aaKnown RBP eCLIP9.01□□□□□ -0.97
PPFIA1-224ENST00000533894 SPOCK2Q92563 424 aa9.01□□□□□ -0.97
PPFIA1-224ENST00000533894 RASEFQ8IZ41 740 aa8.97□□□□□ -0.97
PPFIA1-224ENST00000533894 C19orf67A6NJJ6 358 aa8.95□□□□□ -0.98
PPFIA1-224ENST00000533894 EVX2Q03828 476 aa8.93□□□□□ -0.98
PPFIA1-224ENST00000533894 HAX1O00165 279 aa8.91□□□□□ -0.98
PPFIA1-224ENST00000533894 CD44P16070 742 aaKnown RBP8.9□□□□□ -0.98
PPFIA1-224ENST00000533894 DCAF8Q5TAQ9 597 aa8.9□□□□□ -0.98
PPFIA1-224ENST00000533894 TSPYL2Q9H2G4 693 aaPredicted RBP8.9□□□□□ -0.98
PPFIA1-224ENST00000533894 PKD2Q13563 968 aa8.87□□□□□ -0.99
PPFIA1-224ENST00000533894 FAM212AQ96EL1 285 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms