RNA–Protein interactions for RNA: ENST00000533829.1

PPP1R16A-211, Transcript of protein phosphatase 1 regulatory subunit 16A, humanhuman

TSL 3

Gene PPP1R16A, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R16A-211ENST00000533829 NSD3Q9BZ95 1437 aa22.08■■□□□ 1.13
PPP1R16A-211ENST00000533829 N4BP2Q86UW6 1770 aaPredicted RBP22.08■■□□□ 1.13
PPP1R16A-211ENST00000533829 FCHSD2O94868 740 aa22.08■■□□□ 1.13
PPP1R16A-211ENST00000533829 SSFA2P28290 1259 aa22.08■■□□□ 1.13
PPP1R16A-211ENST00000533829 TGFB2P61812 414 aa22.08■■□□□ 1.13
PPP1R16A-211ENST00000533829 SMARCC1Q92922 1105 aaPredicted RBP22.08■■□□□ 1.13
PPP1R16A-211ENST00000533829 KDM2BQ8NHM5 1336 aa22.07■■□□□ 1.12
PPP1R16A-211ENST00000533829 UBR3Q6ZT12 1888 aa22.07■■□□□ 1.12
PPP1R16A-211ENST00000533829 KCPQ6ZWJ8 1503 aa22.06■■□□□ 1.12
PPP1R16A-211ENST00000533829 NKX1-1Q15270 411 aaPredicted RBP22.06■■□□□ 1.12
PPP1R16A-211ENST00000533829 NCAPD2Q15021 1401 aa22.06■■□□□ 1.12
PPP1R16A-211ENST00000533829 PIGBQ92521 554 aa22.05■■□□□ 1.12
PPP1R16A-211ENST00000533829 PLEKHG2Q9H7P9 1386 aa22.04■■□□□ 1.12
PPP1R16A-211ENST00000533829 PPM1GO15355 546 aaPredicted RBP22.04■■□□□ 1.12
PPP1R16A-211ENST00000533829 DPEP1P16444 411 aa22.04■■□□□ 1.12
PPP1R16A-211ENST00000533829 SMC1BQ8NDV3 1235 aa22.04■■□□□ 1.12
PPP1R16A-211ENST00000533829 SPG7Q9UQ90 795 aa22.04■■□□□ 1.12
PPP1R16A-211ENST00000533829 WASHC2AQ641Q2 1341 aa22.04■■□□□ 1.12
PPP1R16A-211ENST00000533829 LINC00116Q8NCU8 138 aa22.03■■□□□ 1.12
PPP1R16A-211ENST00000533829 PKD1L3Q7Z443 1732 aa22.03■■□□□ 1.12
PPP1R16A-211ENST00000533829 KIAA1551Q9HCM1 1747 aa22.03■■□□□ 1.12
PPP1R16A-211ENST00000533829 GNPATO15228 680 aa22.02■■□□□ 1.12
PPP1R16A-211ENST00000533829 ITGB4P16144 1822 aa22.01■■□□□ 1.11
PPP1R16A-211ENST00000533829 EYA1Q99502 592 aa22.01■■□□□ 1.11
PPP1R16A-211ENST00000533829 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.01■■□□□ 1.11
PPP1R16A-211ENST00000533829 RNF181Q9P0P0 153 aa22.01■■□□□ 1.11
PPP1R16A-211ENST00000533829 KIF13BQ9NQT8 1826 aa22■■□□□ 1.11
PPP1R16A-211ENST00000533829 LOC102724428A0A0B4J2F2 783 aa21.99■■□□□ 1.11
PPP1R16A-211ENST00000533829 SIK1P57059 783 aa21.99■■□□□ 1.11
PPP1R16A-211ENST00000533829 TRIM26Q12899 539 aaPredicted RBP21.98■■□□□ 1.11
PPP1R16A-211ENST00000533829 POLKQ9UBT6 870 aa21.98■■□□□ 1.11
PPP1R16A-211ENST00000533829 C10orf71Q711Q0 1435 aa21.97■■□□□ 1.11
PPP1R16A-211ENST00000533829 TMOD3Q9NYL9 352 aa21.97■■□□□ 1.11
PPP1R16A-211ENST00000533829 TIMELESSQ9UNS1 1208 aa21.97■■□□□ 1.11
PPP1R16A-211ENST00000533829 ANKRD26Q9UPS8 1709 aa21.97■■□□□ 1.11
PPP1R16A-211ENST00000533829 IFNL2Q8IZJ0 200 aa21.96■■□□□ 1.11
PPP1R16A-211ENST00000533829 CCDC87Q9NVE4 849 aa21.96■■□□□ 1.11
PPP1R16A-211ENST00000533829 ASAP1Q9ULH1 1129 aa21.96■■□□□ 1.11
PPP1R16A-211ENST00000533829 MAP2P11137 1827 aaKnown RBP21.95■■□□□ 1.1
PPP1R16A-211ENST00000533829 PHKG2P15735 406 aa21.95■■□□□ 1.1
PPP1R16A-211ENST00000533829 KCNA3P22001 575 aa21.95■■□□□ 1.1
PPP1R16A-211ENST00000533829 NLGN1Q8N2Q7 840 aa21.95■■□□□ 1.1
PPP1R16A-211ENST00000533829 ITPK1Q13572 414 aa21.94■■□□□ 1.1
PPP1R16A-211ENST00000533829 TNRC6CQ9HCJ0 1690 aaKnown RBP21.94■■□□□ 1.1
PPP1R16A-211ENST00000533829 ATP6V1AP38606 617 aa21.93■■□□□ 1.1
PPP1R16A-211ENST00000533829 PIM2Q9P1W9 311 aa21.93■■□□□ 1.1
PPP1R16A-211ENST00000533829 EIF4A2Q14240 407 aaKnown RBP21.92■■□□□ 1.1
PPP1R16A-211ENST00000533829 TRAPPC3LQ5T215 181 aa21.92■■□□□ 1.1
PPP1R16A-211ENST00000533829 ATG3Q9NT62 314 aa21.92■■□□□ 1.1
PPP1R16A-211ENST00000533829 DALRD3Q5D0E6 543 aaKnown RBP21.91■■□□□ 1.1
PPP1R16A-211ENST00000533829 DCAF5Q96JK2 942 aa21.91■■□□□ 1.1
PPP1R16A-211ENST00000533829 PARP3Q9Y6F1 533 aa21.91■■□□□ 1.1
PPP1R16A-211ENST00000533829 BRCA1P38398 1863 aaKnown RBP21.91■■□□□ 1.1
PPP1R16A-211ENST00000533829 ARFGEF1Q9Y6D6 1849 aa21.9■■□□□ 1.1
PPP1R16A-211ENST00000533829 RTCBQ9Y3I0 505 aaKnown RBP21.89■■□□□ 1.09
PPP1R16A-211ENST00000533829 VEGFAP15692 232 aaPredicted RBP21.88■■□□□ 1.09
PPP1R16A-211ENST00000533829 TNNT2P45379 298 aaPredicted RBP21.88■■□□□ 1.09
PPP1R16A-211ENST00000533829 C4AP0C0L4 1744 aa21.87■■□□□ 1.09
PPP1R16A-211ENST00000533829 POLR3GLQ9BT43 218 aa21.87■■□□□ 1.09
PPP1R16A-211ENST00000533829 PCDH10Q9P2E7 1040 aa21.87■■□□□ 1.09
PPP1R16A-211ENST00000533829 ERVV-2B6SEH9 535 aa21.86■■□□□ 1.09
PPP1R16A-211ENST00000533829 ARHGEF1Q92888 912 aaKnown RBP21.86■■□□□ 1.09
PPP1R16A-211ENST00000533829 FOXN1O15353 648 aa21.85■■□□□ 1.09
PPP1R16A-211ENST00000533829 GYS1P13807 737 aa21.85■■□□□ 1.09
PPP1R16A-211ENST00000533829 FAM161AQ3B820 660 aa21.85■■□□□ 1.09
PPP1R16A-211ENST00000533829 KDRP35968 1356 aa21.85■■□□□ 1.09
PPP1R16A-211ENST00000533829 HSP90AB1P08238 724 aaKnown RBP21.84■■□□□ 1.09
PPP1R16A-211ENST00000533829 RFC4P35249 363 aa21.84■■□□□ 1.09
PPP1R16A-211ENST00000533829 SLC4A9Q96Q91 983 aa21.84■■□□□ 1.09
PPP1R16A-211ENST00000533829 MKRN1Q9UHC7 482 aaKnown RBP21.84■■□□□ 1.09
PPP1R16A-211ENST00000533829 SBF1O95248 1867 aa21.83■■□□□ 1.09
PPP1R16A-211ENST00000533829 GLTPD2A6NH11 291 aa21.83■■□□□ 1.09
PPP1R16A-211ENST00000533829 CHRNA5P30532 468 aa21.83■■□□□ 1.09
PPP1R16A-211ENST00000533829 CLSPNQ9HAW4 1339 aa21.82■■□□□ 1.08
PPP1R16A-211ENST00000533829 RASSF7Q02833 373 aa21.82■■□□□ 1.08
PPP1R16A-211ENST00000533829 PLEKHO1Q53GL0 409 aaPredicted RBP21.82■■□□□ 1.08
PPP1R16A-211ENST00000533829 RC3H1Q5TC82 1133 aaKnown RBP21.82■■□□□ 1.08
PPP1R16A-211ENST00000533829 RBM42Q9BTD8 480 aaKnown RBP21.82■■□□□ 1.08
PPP1R16A-211ENST00000533829 PRDM10Q9NQV6 1147 aa21.82■■□□□ 1.08
PPP1R16A-211ENST00000533829 ADRA2BP18089 450 aa21.8■■□□□ 1.08
PPP1R16A-211ENST00000533829 AMOTQ4VCS5 1084 aa21.8■■□□□ 1.08
PPP1R16A-211ENST00000533829 PANK3Q9H999 370 aa21.8■■□□□ 1.08
PPP1R16A-211ENST00000533829 ZC3H4Q9UPT8 1303 aaKnown RBP21.8■■□□□ 1.08
PPP1R16A-211ENST00000533829 ZNF831Q5JPB2 1677 aa21.79■■□□□ 1.08
PPP1R16A-211ENST00000533829 CNTNAP4Q9C0A0 1308 aa21.79■■□□□ 1.08
PPP1R16A-211ENST00000533829 RPS6KA4O75676 772 aa21.78■■□□□ 1.08
PPP1R16A-211ENST00000533829 CABP4P57796 275 aa21.78■■□□□ 1.08
PPP1R16A-211ENST00000533829 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.08
PPP1R16A-211ENST00000533829 ZNF530Q6P9A1 599 aaPredicted RBP21.78■■□□□ 1.08
PPP1R16A-211ENST00000533829 LMNB1P20700 586 aa21.77■■□□□ 1.08
PPP1R16A-211ENST00000533829 CREBZFQ9NS37 354 aa21.77■■□□□ 1.08
PPP1R16A-211ENST00000533829 KDM6AO15550 1401 aaPredicted RBP21.77■■□□□ 1.08
PPP1R16A-211ENST00000533829 HSPA5P11021 654 aaKnown RBP21.76■■□□□ 1.07
PPP1R16A-211ENST00000533829 CTCFP49711 727 aaPredicted RBP21.75■■□□□ 1.07
PPP1R16A-211ENST00000533829 MTHFSP49914 203 aa21.75■■□□□ 1.07
PPP1R16A-211ENST00000533829 AIDAQ96BJ3 306 aa21.75■■□□□ 1.07
PPP1R16A-211ENST00000533829 DDR1Q08345 913 aa21.74■■□□□ 1.07
PPP1R16A-211ENST00000533829 AEBP1Q8IUX7 1158 aa21.74■■□□□ 1.07
PPP1R16A-211ENST00000533829 COL5A3P25940 1745 aaPredicted RBP21.74■■□□□ 1.07
PPP1R16A-211ENST00000533829 POTECB2RU33 542 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms