RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 CHD2O14647 1828 aaKnown RBP10.95□□□□□ -0.66
CASP4-212ENST00000533730 LAMC1P11047 1609 aa10.95□□□□□ -0.66
CASP4-212ENST00000533730 ALKQ9UM73 1620 aa10.95□□□□□ -0.66
CASP4-212ENST00000533730 LRRC7Q96NW7 1537 aa10.95□□□□□ -0.66
CASP4-212ENST00000533730 KDM4AO75164 1064 aa10.95□□□□□ -0.66
CASP4-212ENST00000533730 FUT2Q10981 343 aa10.95□□□□□ -0.66
CASP4-212ENST00000533730 DCAF11Q8TEB1 546 aa10.95□□□□□ -0.66
CASP4-212ENST00000533730 TBC1D2Q9BYX2 928 aa10.95□□□□□ -0.66
CASP4-212ENST00000533730 STRCP1A6NGW2 1772 aa10.95□□□□□ -0.66
CASP4-212ENST00000533730 NCOA3Q9Y6Q9 1424 aa10.94□□□□□ -0.66
CASP4-212ENST00000533730 METP08581 1390 aa10.94□□□□□ -0.66
CASP4-212ENST00000533730 CLSPNQ9HAW4 1339 aa10.94□□□□□ -0.66
CASP4-212ENST00000533730 SPIRE2Q8WWL2 714 aa10.94□□□□□ -0.66
CASP4-212ENST00000533730 AMOTL2Q9Y2J4 779 aa10.94□□□□□ -0.66
CASP4-212ENST00000533730 IRF5Q13568 498 aa10.93□□□□□ -0.66
CASP4-212ENST00000533730 FBXO41Q8TF61 875 aa10.93□□□□□ -0.66
CASP4-212ENST00000533730 PRAG1Q86YV5 1406 aa10.92□□□□□ -0.66
CASP4-212ENST00000533730 SETD1AO15047 1707 aaKnown RBP10.92□□□□□ -0.66
CASP4-212ENST00000533730 XRN1Q8IZH2 1706 aaKnown RBP10.92□□□□□ -0.66
CASP4-212ENST00000533730 SIN3AQ96ST3 1273 aa10.92□□□□□ -0.66
CASP4-212ENST00000533730 C14orf93Q9H972 538 aaKnown RBP10.92□□□□□ -0.66
CASP4-212ENST00000533730 GDPD2Q9HCC8 539 aa10.92□□□□□ -0.66
CASP4-212ENST00000533730 LIMD1Q9UGP4 676 aa10.92□□□□□ -0.66
CASP4-212ENST00000533730 PTPRUQ92729 1446 aa10.92□□□□□ -0.66
CASP4-212ENST00000533730 TMEM94Q12767 1356 aa10.91□□□□□ -0.66
CASP4-212ENST00000533730 ATP6V1AP38606 617 aa10.91□□□□□ -0.66
CASP4-212ENST00000533730 USP46P62068 366 aa10.91□□□□□ -0.66
CASP4-212ENST00000533730 NEUROD1Q13562 356 aa10.91□□□□□ -0.66
CASP4-212ENST00000533730 TMEM259Q4ZIN3 620 aa10.91□□□□□ -0.66
CASP4-212ENST00000533730 MTMR14Q8NCE2 650 aa10.91□□□□□ -0.66
CASP4-212ENST00000533730 PTCH1Q13635 1447 aa10.91□□□□□ -0.66
CASP4-212ENST00000533730 HOXA2O43364 376 aa10.9□□□□□ -0.66
CASP4-212ENST00000533730 TOM1O60784 492 aa10.9□□□□□ -0.66
CASP4-212ENST00000533730 MORN1Q5T089 497 aa10.9□□□□□ -0.66
CASP4-212ENST00000533730 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.66
CASP4-212ENST00000533730 PCDHB3Q9Y5E6 796 aa10.9□□□□□ -0.66
CASP4-212ENST00000533730 LRPPRCP42704 1394 aaKnown RBP10.9□□□□□ -0.67
CASP4-212ENST00000533730 MSH6P52701 1360 aa10.9□□□□□ -0.67
CASP4-212ENST00000533730 TONSLQ96HA7 1378 aa10.9□□□□□ -0.67
CASP4-212ENST00000533730 UBAP1LF5GYI3 381 aa10.89□□□□□ -0.67
CASP4-212ENST00000533730 PUS10Q3MIT2 529 aaKnown RBP10.89□□□□□ -0.67
CASP4-212ENST00000533730 TJAP1Q5JTD0 557 aa10.89□□□□□ -0.67
CASP4-212ENST00000533730 TMCO4Q5TGY1 634 aa10.89□□□□□ -0.67
CASP4-212ENST00000533730 RGS22Q8NE09 1264 aa10.89□□□□□ -0.67
CASP4-212ENST00000533730 L3MBTL2Q969R5 705 aa10.89□□□□□ -0.67
CASP4-212ENST00000533730 GZF1Q9H116 711 aaPredicted RBP10.89□□□□□ -0.67
CASP4-212ENST00000533730 TECPR2O15040 1411 aa10.89□□□□□ -0.67
CASP4-212ENST00000533730 ABCC11Q96J66 1382 aa10.89□□□□□ -0.67
CASP4-212ENST00000533730 MOXD2PA6NHM9 499 aa10.88□□□□□ -0.67
CASP4-212ENST00000533730 DIXDC1Q155Q3 683 aa10.88□□□□□ -0.67
CASP4-212ENST00000533730 CFAP70Q5T0N1 1121 aa10.88□□□□□ -0.67
CASP4-212ENST00000533730 PPP2R2DQ66LE6 453 aa10.88□□□□□ -0.67
CASP4-212ENST00000533730 BLOC1S3Q6QNY0 202 aa10.88□□□□□ -0.67
CASP4-212ENST00000533730 HLA-CQ95604 372 aa10.88□□□□□ -0.67
CASP4-212ENST00000533730 YTHDC2Q9H6S0 1430 aaKnown RBP10.88□□□□□ -0.67
CASP4-212ENST00000533730 KIAA1210Q9ULL0 1709 aa10.87□□□□□ -0.67
CASP4-212ENST00000533730 DCCP43146 1447 aa10.87□□□□□ -0.67
CASP4-212ENST00000533730 XIRP1Q702N8 1843 aaKnown RBP10.87□□□□□ -0.67
CASP4-212ENST00000533730 SIRT1Q96EB6 747 aa10.87□□□□□ -0.67
CASP4-212ENST00000533730 CALR3Q96L12 384 aaKnown RBP10.87□□□□□ -0.67
CASP4-212ENST00000533730 MTRQ99707 1265 aa10.87□□□□□ -0.67
CASP4-212ENST00000533730 C19orf44Q9H6X5 657 aa10.87□□□□□ -0.67
CASP4-212ENST00000533730 ASXL1Q8IXJ9 1541 aa10.87□□□□□ -0.67
CASP4-212ENST00000533730 KNDC1Q76NI1 1749 aa10.87□□□□□ -0.67
CASP4-212ENST00000533730 FAM135BQ49AJ0 1406 aa10.86□□□□□ -0.67
CASP4-212ENST00000533730 POM121CA8CG34 1229 aa10.86□□□□□ -0.67
CASP4-212ENST00000533730 ITGBL1O95965 494 aaPredicted RBP10.86□□□□□ -0.67
CASP4-212ENST00000533730 GRIPAP1Q4V328 841 aa10.86□□□□□ -0.67
CASP4-212ENST00000533730 TMEM132EQ6IEE7 984 aa10.86□□□□□ -0.67
CASP4-212ENST00000533730 RIC3Q7Z5B4 369 aa10.86□□□□□ -0.67
CASP4-212ENST00000533730 CCER1Q8TC90 406 aaPredicted RBP10.86□□□□□ -0.67
CASP4-212ENST00000533730 MTMR7Q9Y216 660 aa10.86□□□□□ -0.67
CASP4-212ENST00000533730 ROBO2Q9HCK4 1378 aa10.86□□□□□ -0.67
CASP4-212ENST00000533730 ADGRB1O14514 1584 aa10.86□□□□□ -0.67
CASP4-212ENST00000533730 ADGRL3Q9HAR2 1447 aa10.85□□□□□ -0.67
CASP4-212ENST00000533730 DLC1Q96QB1 1528 aa10.85□□□□□ -0.67
CASP4-212ENST00000533730 NDUFV2P19404 249 aa10.85□□□□□ -0.67
CASP4-212ENST00000533730 GJA5P36382 358 aa10.85□□□□□ -0.67
CASP4-212ENST00000533730 ABL2P42684 1182 aa10.85□□□□□ -0.67
CASP4-212ENST00000533730 WWC1Q8IX03 1113 aa10.85□□□□□ -0.67
CASP4-212ENST00000533730 SCUBE3Q8IX30 993 aa10.85□□□□□ -0.67
CASP4-212ENST00000533730 STK26Q9P289 416 aa10.85□□□□□ -0.67
CASP4-212ENST00000533730 SLC27A5Q9Y2P5 690 aa10.85□□□□□ -0.67
CASP4-212ENST00000533730 SPTLC1O15269 473 aa10.84□□□□□ -0.67
CASP4-212ENST00000533730 ATF3P18847 181 aa10.84□□□□□ -0.67
CASP4-212ENST00000533730 MFAP1P55081 439 aaKnown RBP10.84□□□□□ -0.67
CASP4-212ENST00000533730 COPS2P61201 443 aa10.84□□□□□ -0.67
CASP4-212ENST00000533730 GUCA2AQ02747 115 aa10.84□□□□□ -0.67
CASP4-212ENST00000533730 ZNF516Q92618 1163 aa10.84□□□□□ -0.67
CASP4-212ENST00000533730 GLMNQ92990 594 aa10.84□□□□□ -0.67
CASP4-212ENST00000533730 PCDHGC3Q9UN70 934 aa10.84□□□□□ -0.67
CASP4-212ENST00000533730 RSBN1LQ6PCB5 846 aaPredicted RBP10.83□□□□□ -0.68
CASP4-212ENST00000533730 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
CASP4-212ENST00000533730 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.82□□□□□ -0.68
CASP4-212ENST00000533730 ZPR1O75312 459 aa10.82□□□□□ -0.68
CASP4-212ENST00000533730 NR1I2O75469 434 aa10.82□□□□□ -0.68
CASP4-212ENST00000533730 THAP11Q96EK4 314 aa10.82□□□□□ -0.68
CASP4-212ENST00000533730 TBC1D2BQ9UPU7 963 aa10.82□□□□□ -0.68
CASP4-212ENST00000533730 SALL2Q9Y467 1007 aaPredicted RBP10.82□□□□□ -0.68
CASP4-212ENST00000533730 FDX1P10109 184 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms