RNA–Protein interactions for RNA: ENST00000533511.6

NUCB2-215, Transcript of nucleobindin 2, humanhuman

TSL 3

Gene NUCB2, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB2-215ENST00000533511 PLEKHO1Q53GL0 409 aaPredicted RBP21.57■■□□□ 1.04
NUCB2-215ENST00000533511 ITGB4P16144 1822 aa21.57■■□□□ 1.04
NUCB2-215ENST00000533511 ITPK1Q13572 414 aa21.56■■□□□ 1.04
NUCB2-215ENST00000533511 IGSF1Q8N6C5 1336 aa21.55■■□□□ 1.04
NUCB2-215ENST00000533511 HSP90AB1P08238 724 aaKnown RBP21.55■■□□□ 1.04
NUCB2-215ENST00000533511 SENP3-EIF4A1A0A087X0R7 540 aa21.54■■□□□ 1.04
NUCB2-215ENST00000533511 ERVV-2B6SEH9 535 aa21.54■■□□□ 1.04
NUCB2-215ENST00000533511 GIGYF1O75420 1035 aaPredicted RBP21.54■■□□□ 1.04
NUCB2-215ENST00000533511 DCAF5Q96JK2 942 aa21.54■■□□□ 1.04
NUCB2-215ENST00000533511 RBM42Q9BTD8 480 aaKnown RBP21.54■■□□□ 1.04
NUCB2-215ENST00000533511 TAF1LQ8IZX4 1826 aa21.54■■□□□ 1.04
NUCB2-215ENST00000533511 AMOTQ4VCS5 1084 aa21.53■■□□□ 1.04
NUCB2-215ENST00000533511 KNSTRNQ9Y448 316 aa21.53■■□□□ 1.04
NUCB2-215ENST00000533511 PLEKHG2Q9H7P9 1386 aa21.52■■□□□ 1.04
NUCB2-215ENST00000533511 CABP4P57796 275 aa21.52■■□□□ 1.04
NUCB2-215ENST00000533511 ZNF530Q6P9A1 599 aaPredicted RBP21.52■■□□□ 1.04
NUCB2-215ENST00000533511 TRAPPC3LQ5T215 181 aa21.51■■□□□ 1.03
NUCB2-215ENST00000533511 WWC3Q9ULE0 1092 aa21.51■■□□□ 1.03
NUCB2-215ENST00000533511 MTHFSP49914 203 aa21.5■■□□□ 1.03
NUCB2-215ENST00000533511 C1orf141Q5JVX7 400 aa21.5■■□□□ 1.03
NUCB2-215ENST00000533511 RTCBQ9Y3I0 505 aaKnown RBP21.5■■□□□ 1.03
NUCB2-215ENST00000533511 SULT6B1Q6IMI4 303 aa21.48■■□□□ 1.03
NUCB2-215ENST00000533511 AEBP1Q8IUX7 1158 aa21.48■■□□□ 1.03
NUCB2-215ENST00000533511 MMP10P09238 476 aa21.47■■□□□ 1.03
NUCB2-215ENST00000533511 UBR3Q6ZT12 1888 aa21.47■■□□□ 1.03
NUCB2-215ENST00000533511 SLC4A9Q96Q91 983 aa21.46■■□□□ 1.03
NUCB2-215ENST00000533511 PTCD1O75127 700 aaKnown RBP21.45■■□□□ 1.02
NUCB2-215ENST00000533511 RC3H1Q5TC82 1133 aaKnown RBP21.45■■□□□ 1.02
NUCB2-215ENST00000533511 NLGN1Q8N2Q7 840 aa21.45■■□□□ 1.02
NUCB2-215ENST00000533511 KDRP35968 1356 aa21.45■■□□□ 1.02
NUCB2-215ENST00000533511 RFC4P35249 363 aa21.44■■□□□ 1.02
NUCB2-215ENST00000533511 NFATC2IPQ8NCF5 419 aa21.44■■□□□ 1.02
NUCB2-215ENST00000533511 ARHGEF1Q92888 912 aaKnown RBP21.44■■□□□ 1.02
NUCB2-215ENST00000533511 KDM6AO15550 1401 aaPredicted RBP21.43■■□□□ 1.02
NUCB2-215ENST00000533511 ATP10DQ9P241 1426 aa21.43■■□□□ 1.02
NUCB2-215ENST00000533511 RPS6KA4O75676 772 aa21.42■■□□□ 1.02
NUCB2-215ENST00000533511 IL13P35225 146 aa21.42■■□□□ 1.02
NUCB2-215ENST00000533511 GPBP1L1Q9HC44 474 aaPredicted RBP21.42■■□□□ 1.02
NUCB2-215ENST00000533511 CNTNAP4Q9C0A0 1308 aa21.41■■□□□ 1.02
NUCB2-215ENST00000533511 ZNF526Q8TF50 670 aaPredicted RBP21.41■■□□□ 1.02
NUCB2-215ENST00000533511 AMER1Q5JTC6 1135 aaPredicted RBP21.39■■□□□ 1.01
NUCB2-215ENST00000533511 GYS1P13807 737 aa21.38■■□□□ 1.01
NUCB2-215ENST00000533511 TGFB2P61812 414 aa21.38■■□□□ 1.01
NUCB2-215ENST00000533511 PARP3Q9Y6F1 533 aa21.38■■□□□ 1.01
NUCB2-215ENST00000533511 KIF7Q2M1P5 1343 aa21.37■■□□□ 1.01
NUCB2-215ENST00000533511 A0A0G2JLW4 131 aa21.37■■□□□ 1.01
NUCB2-215ENST00000533511 AKAP4Q5JQC9 854 aa21.37■■□□□ 1.01
NUCB2-215ENST00000533511 CCDC87Q9NVE4 849 aa21.37■■□□□ 1.01
NUCB2-215ENST00000533511 HMOX1P09601 288 aa21.36■■□□□ 1.01
NUCB2-215ENST00000533511 CRKLP46109 303 aaKnown RBP21.36■■□□□ 1.01
NUCB2-215ENST00000533511 BCS1LQ9Y276 419 aa21.36■■□□□ 1.01
NUCB2-215ENST00000533511 CC2D1BQ5T0F9 858 aaKnown RBP21.34■■□□□ 1.01
NUCB2-215ENST00000533511 CICQ96RK0 1608 aaPredicted RBP21.33■■□□□ 1.01
NUCB2-215ENST00000533511 PXDNLA1KZ92 1463 aa21.33■■□□□ 1.01
NUCB2-215ENST00000533511 SLC52A2Q9HAB3 445 aa21.33■■□□□ 1.01
NUCB2-215ENST00000533511 LGR6Q9HBX8 967 aa21.33■■□□□ 1.01
NUCB2-215ENST00000533511 ZNF831Q5JPB2 1677 aa21.33■■□□□ 1
NUCB2-215ENST00000533511 ADCY9O60503 1353 aa21.33■■□□□ 1
NUCB2-215ENST00000533511 DIAPH1O60610 1272 aaKnown RBP21.32■■□□□ 1
NUCB2-215ENST00000533511 DPEP1P16444 411 aa21.32■■□□□ 1
NUCB2-215ENST00000533511 CNGB1Q14028 1251 aaPredicted RBP21.32■■□□□ 1
NUCB2-215ENST00000533511 SRP68Q9UHB9 627 aaKnown RBP21.32■■□□□ 1
NUCB2-215ENST00000533511 ARHGAP27Q6ZUM4 889 aa21.31■■□□□ 1
NUCB2-215ENST00000533511 C10orf71Q711Q0 1435 aa21.3■■□□□ 1
NUCB2-215ENST00000533511 RNMTO43148 476 aaKnown RBP21.3■■□□□ 1
NUCB2-215ENST00000533511 FCHSD2O94868 740 aa21.3■■□□□ 1
NUCB2-215ENST00000533511 INTS5Q6P9B9 1019 aaKnown RBP21.3■■□□□ 1
NUCB2-215ENST00000533511 DNAJC10Q8IXB1 793 aa21.3■■□□□ 1
NUCB2-215ENST00000533511 USP42Q9H9J4 1324 aaKnown RBP21.29■■□□□ 1
NUCB2-215ENST00000533511 COL5A3P25940 1745 aaPredicted RBP21.29■■□□□ 1
NUCB2-215ENST00000533511 PER1O15534 1290 aaPredicted RBP21.29■■□□□ 1
NUCB2-215ENST00000533511 FKBP8Q14318 412 aa21.29■■□□□ 1
NUCB2-215ENST00000533511 ZPR1O75312 459 aa21.28■■□□□ 1
NUCB2-215ENST00000533511 SLC39A6Q13433 755 aa21.28■■□□□ 1
NUCB2-215ENST00000533511 MTHFSDQ2M296 383 aaKnown RBP21.28■■□□□ 1
NUCB2-215ENST00000533511 CEP350Q5VT06 3117 aa21.27■□□□□ 0.99
NUCB2-215ENST00000533511 PIM2Q9P1W9 311 aa21.26■□□□□ 0.99
NUCB2-215ENST00000533511 C4AP0C0L4 1744 aa21.26■□□□□ 0.99
NUCB2-215ENST00000533511 U2SURPO15042 1029 aaKnown RBP21.25■□□□□ 0.99
NUCB2-215ENST00000533511 DDR1Q08345 913 aa21.25■□□□□ 0.99
NUCB2-215ENST00000533511 USPL1Q5W0Q7 1092 aa21.25■□□□□ 0.99
NUCB2-215ENST00000533511 CYP19A1P11511 503 aaPredicted RBP21.24■□□□□ 0.99
NUCB2-215ENST00000533511 KCNA3P22001 575 aa21.24■□□□□ 0.99
NUCB2-215ENST00000533511 N4BP2Q86UW6 1770 aaPredicted RBP21.23■□□□□ 0.99
NUCB2-215ENST00000533511 MYH14Q7Z406 1995 aaKnown RBP21.23■□□□□ 0.99
NUCB2-215ENST00000533511 HSPA6P17066 643 aa21.22■□□□□ 0.99
NUCB2-215ENST00000533511 TM4SF1P30408 202 aa21.22■□□□□ 0.99
NUCB2-215ENST00000533511 DALRD3Q5D0E6 543 aaKnown RBP21.22■□□□□ 0.99
NUCB2-215ENST00000533511 SOS1Q07889 1333 aaPredicted RBP21.22■□□□□ 0.99
NUCB2-215ENST00000533511 KIF13BQ9NQT8 1826 aa21.22■□□□□ 0.99
NUCB2-215ENST00000533511 SCN11AQ9UI33 1791 aa21.21■□□□□ 0.99
NUCB2-215ENST00000533511 POLRMTO00411 1230 aaKnown RBP21.21■□□□□ 0.99
NUCB2-215ENST00000533511 KIF3CO14782 793 aa21.21■□□□□ 0.99
NUCB2-215ENST00000533511 TTC5Q8N0Z6 440 aa21.21■□□□□ 0.99
NUCB2-215ENST00000533511 TJP1Q07157 1748 aa21.21■□□□□ 0.99
NUCB2-215ENST00000533511 CHRNA5P30532 468 aa21.2■□□□□ 0.98
NUCB2-215ENST00000533511 VSIG10Q8N0Z9 540 aa21.2■□□□□ 0.98
NUCB2-215ENST00000533511 NARFQ9UHQ1 456 aa21.2■□□□□ 0.98
NUCB2-215ENST00000533511 ZBTB1Q9Y2K1 713 aa21.2■□□□□ 0.98
NUCB2-215ENST00000533511 KIAA1551Q9HCM1 1747 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms