RNA–Protein interactions for RNA: ENST00000533398.5

VAV3-215, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene VAV3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-215ENST00000533398 SLC16A10Q8TF71 515 aa12.54□□□□□ -0.4
VAV3-215ENST00000533398 PALLDQ8WX93 1383 aa12.54□□□□□ -0.4
VAV3-215ENST00000533398 TNNT2P45379 298 aaPredicted RBP12.53□□□□□ -0.4
VAV3-215ENST00000533398 SMIM5Q71RC9 77 aa12.53□□□□□ -0.4
VAV3-215ENST00000533398 SPDYE1Q8NFV5 336 aaPredicted RBP12.53□□□□□ -0.4
VAV3-215ENST00000533398 KIF24Q5T7B8 1368 aa12.53□□□□□ -0.4
VAV3-215ENST00000533398 C4BP0C0L5 1744 aa12.52□□□□□ -0.41
VAV3-215ENST00000533398 AMIGO3Q86WK7 504 aa12.51□□□□□ -0.41
VAV3-215ENST00000533398 EYA1Q99502 592 aa12.51□□□□□ -0.41
VAV3-215ENST00000533398 NCAPD2Q15021 1401 aa12.51□□□□□ -0.41
VAV3-215ENST00000533398 PIGBQ92521 554 aa12.5□□□□□ -0.41
VAV3-215ENST00000533398 POLKQ9UBT6 870 aa12.5□□□□□ -0.41
VAV3-215ENST00000533398 CLSPNQ9HAW4 1339 aa12.5□□□□□ -0.41
VAV3-215ENST00000533398 UBR3Q6ZT12 1888 aa12.5□□□□□ -0.41
VAV3-215ENST00000533398 WASHC2AQ641Q2 1341 aa12.49□□□□□ -0.41
VAV3-215ENST00000533398 PHF14O94880 888 aa12.49□□□□□ -0.41
VAV3-215ENST00000533398 YBX3P16989 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
VAV3-215ENST00000533398 EIF4A2Q14240 407 aaKnown RBP12.48□□□□□ -0.41
VAV3-215ENST00000533398 HSPA5P11021 654 aaKnown RBP12.47□□□□□ -0.41
VAV3-215ENST00000533398 AK7Q96M32 723 aa12.47□□□□□ -0.41
VAV3-215ENST00000533398 WWC3Q9ULE0 1092 aa12.47□□□□□ -0.41
VAV3-215ENST00000533398 TIMELESSQ9UNS1 1208 aa12.47□□□□□ -0.41
VAV3-215ENST00000533398 SPG7Q9UQ90 795 aa12.47□□□□□ -0.41
VAV3-215ENST00000533398 SSUH2Q9Y2M2 353 aa12.47□□□□□ -0.41
VAV3-215ENST00000533398 NKX1-1Q15270 411 aaPredicted RBP12.46□□□□□ -0.41
VAV3-215ENST00000533398 LINC00116Q8NCU8 138 aa12.46□□□□□ -0.41
VAV3-215ENST00000533398 ASAP1Q9ULH1 1129 aa12.46□□□□□ -0.41
VAV3-215ENST00000533398 PHKG2P15735 406 aa12.45□□□□□ -0.42
VAV3-215ENST00000533398 ITPK1Q13572 414 aa12.45□□□□□ -0.42
VAV3-215ENST00000533398 SMARCC1Q92922 1105 aaPredicted RBP12.45□□□□□ -0.42
VAV3-215ENST00000533398 PANK3Q9H999 370 aa12.45□□□□□ -0.42
VAV3-215ENST00000533398 TMOD3Q9NYL9 352 aa12.45□□□□□ -0.42
VAV3-215ENST00000533398 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.44□□□□□ -0.42
VAV3-215ENST00000533398 LOC102724428A0A0B4J2F2 783 aa12.44□□□□□ -0.42
VAV3-215ENST00000533398 SIK1P57059 783 aa12.44□□□□□ -0.42
VAV3-215ENST00000533398 EIF4G2P78344 907 aaKnown RBP eCLIP12.44□□□□□ -0.42
VAV3-215ENST00000533398 IFNL2Q8IZJ0 200 aa12.44□□□□□ -0.42
VAV3-215ENST00000533398 FLAD1Q8NFF5 587 aa12.43□□□□□ -0.42
VAV3-215ENST00000533398 ATG3Q9NT62 314 aa12.43□□□□□ -0.42
VAV3-215ENST00000533398 GNPATO15228 680 aa12.42□□□□□ -0.42
VAV3-215ENST00000533398 ATP6V1AP38606 617 aa12.42□□□□□ -0.42
VAV3-215ENST00000533398 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.42□□□□□ -0.42
VAV3-215ENST00000533398 IGSF1Q8N6C5 1336 aa12.41□□□□□ -0.42
VAV3-215ENST00000533398 C19orf67A6NJJ6 358 aa12.41□□□□□ -0.42
VAV3-215ENST00000533398 C1QTNF8P60827 252 aa12.41□□□□□ -0.42
VAV3-215ENST00000533398 AEBP1Q8IUX7 1158 aa12.41□□□□□ -0.42
VAV3-215ENST00000533398 SENP3-EIF4A1A0A087X0R7 540 aa12.4□□□□□ -0.42
VAV3-215ENST00000533398 SLC4A9Q96Q91 983 aa12.4□□□□□ -0.42
VAV3-215ENST00000533398 CD2APQ9Y5K6 639 aa12.4□□□□□ -0.42
VAV3-215ENST00000533398 COL5A3P25940 1745 aaPredicted RBP12.4□□□□□ -0.43
VAV3-215ENST00000533398 KDM6AO15550 1401 aaPredicted RBP12.39□□□□□ -0.43
VAV3-215ENST00000533398 GRIN3BO60391 1043 aa12.39□□□□□ -0.43
VAV3-215ENST00000533398 SSFA2P28290 1259 aa12.39□□□□□ -0.43
VAV3-215ENST00000533398 ZNF530Q6P9A1 599 aaPredicted RBP12.39□□□□□ -0.43
VAV3-215ENST00000533398 MORC1Q86VD1 984 aa12.39□□□□□ -0.43
VAV3-215ENST00000533398 KDRP35968 1356 aa12.39□□□□□ -0.43
VAV3-215ENST00000533398 GIGYF1O75420 1035 aaPredicted RBP12.38□□□□□ -0.43
VAV3-215ENST00000533398 N4BP2Q86UW6 1770 aaPredicted RBP12.38□□□□□ -0.43
VAV3-215ENST00000533398 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
VAV3-215ENST00000533398 PLEKHO1Q53GL0 409 aaPredicted RBP12.37□□□□□ -0.43
VAV3-215ENST00000533398 CHADLQ6NUI6 762 aa12.37□□□□□ -0.43
VAV3-215ENST00000533398 ZNF526Q8TF50 670 aaPredicted RBP12.37□□□□□ -0.43
VAV3-215ENST00000533398 MYH14Q7Z406 1995 aaKnown RBP12.37□□□□□ -0.43
VAV3-215ENST00000533398 C4AP0C0L4 1744 aa12.37□□□□□ -0.43
VAV3-215ENST00000533398 KIAA1551Q9HCM1 1747 aa12.37□□□□□ -0.43
VAV3-215ENST00000533398 CICQ96RK0 1608 aaPredicted RBP12.37□□□□□ -0.43
VAV3-215ENST00000533398 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
VAV3-215ENST00000533398 ERVV-2B6SEH9 535 aa12.36□□□□□ -0.43
VAV3-215ENST00000533398 MMP10P09238 476 aa12.36□□□□□ -0.43
VAV3-215ENST00000533398 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
VAV3-215ENST00000533398 CABP4P57796 275 aa12.36□□□□□ -0.43
VAV3-215ENST00000533398 SULT6B1Q6IMI4 303 aa12.36□□□□□ -0.43
VAV3-215ENST00000533398 DCAF5Q96JK2 942 aa12.36□□□□□ -0.43
VAV3-215ENST00000533398 VIRMAQ69YN4 1812 aaKnown RBP12.35□□□□□ -0.43
VAV3-215ENST00000533398 TJP1Q07157 1748 aa12.35□□□□□ -0.43
VAV3-215ENST00000533398 PTCD1O75127 700 aaKnown RBP12.35□□□□□ -0.43
VAV3-215ENST00000533398 SCN11AQ9UI33 1791 aa12.35□□□□□ -0.43
VAV3-215ENST00000533398 KIF13BQ9NQT8 1826 aa12.34□□□□□ -0.43
VAV3-215ENST00000533398 HSP90AB1P08238 724 aaKnown RBP12.34□□□□□ -0.43
VAV3-215ENST00000533398 MTHFSP49914 203 aa12.34□□□□□ -0.43
VAV3-215ENST00000533398 TRAPPC3LQ5T215 181 aa12.34□□□□□ -0.43
VAV3-215ENST00000533398 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
VAV3-215ENST00000533398 ARHGEF1Q92888 912 aaKnown RBP12.34□□□□□ -0.43
VAV3-215ENST00000533398 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
VAV3-215ENST00000533398 KNSTRNQ9Y448 316 aa12.34□□□□□ -0.43
VAV3-215ENST00000533398 IL13P35225 146 aa12.33□□□□□ -0.44
VAV3-215ENST00000533398 CNGB1Q14028 1251 aaPredicted RBP12.33□□□□□ -0.44
VAV3-215ENST00000533398 AMOTQ4VCS5 1084 aa12.33□□□□□ -0.44
VAV3-215ENST00000533398 C1orf141Q5JVX7 400 aa12.33□□□□□ -0.44
VAV3-215ENST00000533398 CEP350Q5VT06 3117 aa12.33□□□□□ -0.44
VAV3-215ENST00000533398 KIF7Q2M1P5 1343 aa12.33□□□□□ -0.44
VAV3-215ENST00000533398 PXDNLA1KZ92 1463 aa12.33□□□□□ -0.44
VAV3-215ENST00000533398 PLEKHG2Q9H7P9 1386 aa12.32□□□□□ -0.44
VAV3-215ENST00000533398 GABBR2O75899 941 aa12.32□□□□□ -0.44
VAV3-215ENST00000533398 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
VAV3-215ENST00000533398 ADCY9O60503 1353 aa12.31□□□□□ -0.44
VAV3-215ENST00000533398 A0A0G2JLW4 131 aa12.31□□□□□ -0.44
VAV3-215ENST00000533398 HMOX1P09601 288 aa12.31□□□□□ -0.44
VAV3-215ENST00000533398 PRR29P0C7W0 189 aa12.31□□□□□ -0.44
VAV3-215ENST00000533398 GYS1P13807 737 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms