RNA–Protein interactions for RNA: ENST00000533110.5

CTSB-227, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 399 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-227ENST00000533110 TNRC6CQ9HCJ0 1690 aaKnown RBP13.03□□□□□ -0.32
CTSB-227ENST00000533110 PKD1L3Q7Z443 1732 aa13.03□□□□□ -0.32
CTSB-227ENST00000533110 CYP27B1O15528 508 aa13.03□□□□□ -0.32
CTSB-227ENST00000533110 FBLN1P23142 703 aa13.03□□□□□ -0.32
CTSB-227ENST00000533110 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
CTSB-227ENST00000533110 TMF1P82094 1093 aa13.03□□□□□ -0.32
CTSB-227ENST00000533110 RRS1Q15050 365 aaKnown RBP13.03□□□□□ -0.32
CTSB-227ENST00000533110 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
CTSB-227ENST00000533110 TRAPPC3LQ5T215 181 aa13.02□□□□□ -0.33
CTSB-227ENST00000533110 TMOD3Q9NYL9 352 aa13.02□□□□□ -0.33
CTSB-227ENST00000533110 PIM2Q9P1W9 311 aa13.02□□□□□ -0.33
CTSB-227ENST00000533110 PARP3Q9Y6F1 533 aa13.02□□□□□ -0.33
CTSB-227ENST00000533110 ITPK1Q13572 414 aa13.01□□□□□ -0.33
CTSB-227ENST00000533110 DALRD3Q5D0E6 543 aaKnown RBP13.01□□□□□ -0.33
CTSB-227ENST00000533110 PCNTO95613 3336 aa13.01□□□□□ -0.33
CTSB-227ENST00000533110 DCAF5Q96JK2 942 aa13□□□□□ -0.33
CTSB-227ENST00000533110 CARD11Q9BXL7 1154 aa13□□□□□ -0.33
CTSB-227ENST00000533110 C4AP0C0L4 1744 aa12.99□□□□□ -0.33
CTSB-227ENST00000533110 INSRP06213 1382 aa12.99□□□□□ -0.33
CTSB-227ENST00000533110 ZC3H4Q9UPT8 1303 aaKnown RBP12.99□□□□□ -0.33
CTSB-227ENST00000533110 ADRA2BP18089 450 aa12.99□□□□□ -0.33
CTSB-227ENST00000533110 RFC4P35249 363 aa12.99□□□□□ -0.33
CTSB-227ENST00000533110 PUS7Q96PZ0 661 aaKnown RBP12.99□□□□□ -0.33
CTSB-227ENST00000533110 SPG7Q9UQ90 795 aa12.99□□□□□ -0.33
CTSB-227ENST00000533110 ITGB4P16144 1822 aa12.99□□□□□ -0.33
CTSB-227ENST00000533110 FLT4P35916 1363 aa12.98□□□□□ -0.33
CTSB-227ENST00000533110 MAP2P11137 1827 aaKnown RBP12.98□□□□□ -0.33
CTSB-227ENST00000533110 ASAP1Q9ULH1 1129 aa12.98□□□□□ -0.33
CTSB-227ENST00000533110 GYS1P13807 737 aa12.97□□□□□ -0.33
CTSB-227ENST00000533110 VEGFAP15692 232 aaPredicted RBP12.97□□□□□ -0.33
CTSB-227ENST00000533110 KCNA3P22001 575 aa12.97□□□□□ -0.33
CTSB-227ENST00000533110 NKX1-1Q15270 411 aaPredicted RBP12.97□□□□□ -0.33
CTSB-227ENST00000533110 HSP90AB2PQ58FF8 381 aa12.97□□□□□ -0.33
CTSB-227ENST00000533110 ARFGEF1Q9Y6D6 1849 aa12.97□□□□□ -0.33
CTSB-227ENST00000533110 BRCA1P38398 1863 aaKnown RBP12.96□□□□□ -0.33
CTSB-227ENST00000533110 ARHGEF1Q92888 912 aaKnown RBP12.96□□□□□ -0.33
CTSB-227ENST00000533110 KIF24Q5T7B8 1368 aa12.95□□□□□ -0.34
CTSB-227ENST00000533110 GGNBP2Q9H3C7 697 aa12.95□□□□□ -0.34
CTSB-227ENST00000533110 ATG3Q9NT62 314 aa12.95□□□□□ -0.34
CTSB-227ENST00000533110 KDRP35968 1356 aa12.94□□□□□ -0.34
CTSB-227ENST00000533110 NEUROD1Q13562 356 aa12.94□□□□□ -0.34
CTSB-227ENST00000533110 AIDAQ96BJ3 306 aa12.94□□□□□ -0.34
CTSB-227ENST00000533110 CNTNAP4Q9C0A0 1308 aa12.93□□□□□ -0.34
CTSB-227ENST00000533110 GLTPD2A6NH11 291 aa12.93□□□□□ -0.34
CTSB-227ENST00000533110 LMNB1P20700 586 aa12.93□□□□□ -0.34
CTSB-227ENST00000533110 CHRNA5P30532 468 aa12.93□□□□□ -0.34
CTSB-227ENST00000533110 RASSF7Q02833 373 aa12.93□□□□□ -0.34
CTSB-227ENST00000533110 RC3H1Q5TC82 1133 aaKnown RBP12.93□□□□□ -0.34
CTSB-227ENST00000533110 IFNL2Q8IZJ0 200 aa12.93□□□□□ -0.34
CTSB-227ENST00000533110 SIN3AQ96ST3 1273 aa12.93□□□□□ -0.34
CTSB-227ENST00000533110 RBM42Q9BTD8 480 aaKnown RBP12.93□□□□□ -0.34
CTSB-227ENST00000533110 RPS6KA4O75676 772 aa12.92□□□□□ -0.34
CTSB-227ENST00000533110 PRDM10Q9NQV6 1147 aa12.92□□□□□ -0.34
CTSB-227ENST00000533110 MKRN1Q9UHC7 482 aaKnown RBP12.92□□□□□ -0.34
CTSB-227ENST00000533110 FYB1O15117 783 aa12.91□□□□□ -0.34
CTSB-227ENST00000533110 FOXN1O15353 648 aa12.91□□□□□ -0.34
CTSB-227ENST00000533110 PHKG2P15735 406 aa12.91□□□□□ -0.34
CTSB-227ENST00000533110 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
CTSB-227ENST00000533110 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.91□□□□□ -0.34
CTSB-227ENST00000533110 PCDH10Q9P2E7 1040 aa12.91□□□□□ -0.34
CTSB-227ENST00000533110 KDM6AO15550 1401 aaPredicted RBP12.9□□□□□ -0.34
CTSB-227ENST00000533110 CTCFP49711 727 aaPredicted RBP12.9□□□□□ -0.34
CTSB-227ENST00000533110 FAM161AQ3B820 660 aa12.9□□□□□ -0.34
CTSB-227ENST00000533110 NCAPD2Q15021 1401 aa12.89□□□□□ -0.35
CTSB-227ENST00000533110 PPM1GO15355 546 aaPredicted RBP12.89□□□□□ -0.35
CTSB-227ENST00000533110 SLC24A1O60721 1099 aa12.89□□□□□ -0.35
CTSB-227ENST00000533110 DDR1Q08345 913 aa12.89□□□□□ -0.35
CTSB-227ENST00000533110 DPY19L2Q6NUT2 758 aa12.89□□□□□ -0.35
CTSB-227ENST00000533110 USP42Q9H9J4 1324 aaKnown RBP12.88□□□□□ -0.35
CTSB-227ENST00000533110 FKBP8Q14318 412 aa12.88□□□□□ -0.35
CTSB-227ENST00000533110 SLC4A9Q96Q91 983 aa12.88□□□□□ -0.35
CTSB-227ENST00000533110 SRP68Q9UHB9 627 aaKnown RBP12.88□□□□□ -0.35
CTSB-227ENST00000533110 EMILIN1Q9Y6C2 1016 aa12.88□□□□□ -0.35
CTSB-227ENST00000533110 ZNF831Q5JPB2 1677 aa12.87□□□□□ -0.35
CTSB-227ENST00000533110 TONSLQ96HA7 1378 aa12.87□□□□□ -0.35
CTSB-227ENST00000533110 TIAM2Q8IVF5 1701 aa12.87□□□□□ -0.35
CTSB-227ENST00000533110 CNTNAP1P78357 1384 aa12.86□□□□□ -0.35
CTSB-227ENST00000533110 COL5A3P25940 1745 aaPredicted RBP12.86□□□□□ -0.35
CTSB-227ENST00000533110 POLRMTO00411 1230 aaKnown RBP12.86□□□□□ -0.35
CTSB-227ENST00000533110 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
CTSB-227ENST00000533110 CRKLP46109 303 aaKnown RBP12.86□□□□□ -0.35
CTSB-227ENST00000533110 CHADLQ6NUI6 762 aa12.86□□□□□ -0.35
CTSB-227ENST00000533110 SBF1O95248 1867 aa12.86□□□□□ -0.35
CTSB-227ENST00000533110 ERVV-2B6SEH9 535 aa12.85□□□□□ -0.35
CTSB-227ENST00000533110 TTLL6Q8N841 843 aa12.85□□□□□ -0.35
CTSB-227ENST00000533110 TESK2Q96S53 571 aa12.85□□□□□ -0.35
CTSB-227ENST00000533110 EYA1Q99502 592 aa12.85□□□□□ -0.35
CTSB-227ENST00000533110 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
CTSB-227ENST00000533110 PTCD1O75127 700 aaKnown RBP12.84□□□□□ -0.35
CTSB-227ENST00000533110 ZPR1O75312 459 aa12.84□□□□□ -0.35
CTSB-227ENST00000533110 CABP4P57796 275 aa12.84□□□□□ -0.35
CTSB-227ENST00000533110 ABHD8Q96I13 439 aa12.84□□□□□ -0.35
CTSB-227ENST00000533110 KIF20BQ96Q89 1820 aa12.83□□□□□ -0.35
CTSB-227ENST00000533110 LBX1P52954 281 aa12.83□□□□□ -0.36
CTSB-227ENST00000533110 POTECB2RU33 542 aa12.82□□□□□ -0.36
CTSB-227ENST00000533110 NFKBIEO00221 500 aa12.82□□□□□ -0.36
CTSB-227ENST00000533110 MLLT1Q03111 559 aaPredicted RBP12.82□□□□□ -0.36
CTSB-227ENST00000533110 ERFEQ4G0M1 354 aa12.82□□□□□ -0.36
CTSB-227ENST00000533110 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
CTSB-227ENST00000533110 TM4SF1P30408 202 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms