RNA–Protein interactions for RNA: ENST00000533011.5

CHMP4A-206, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 733 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-206ENST00000533011 CCDC87Q9NVE4 849 aa13.95□□□□□ -0.18
CHMP4A-206ENST00000533011 KIF24Q5T7B8 1368 aa13.95□□□□□ -0.18
CHMP4A-206ENST00000533011 MMP10P09238 476 aa13.94□□□□□ -0.18
CHMP4A-206ENST00000533011 MPRIPQ6WCQ1 1025 aa13.94□□□□□ -0.18
CHMP4A-206ENST00000533011 RAPGEF4Q8WZA2 1011 aa13.94□□□□□ -0.18
CHMP4A-206ENST00000533011 ANKRD26Q9UPS8 1709 aa13.94□□□□□ -0.18
CHMP4A-206ENST00000533011 VEGFAP15692 232 aaPredicted RBP13.93□□□□□ -0.18
CHMP4A-206ENST00000533011 PIM2Q9P1W9 311 aa13.93□□□□□ -0.18
CHMP4A-206ENST00000533011 KNSTRNQ9Y448 316 aa13.93□□□□□ -0.18
CHMP4A-206ENST00000533011 C4BP0C0L5 1744 aa13.93□□□□□ -0.18
CHMP4A-206ENST00000533011 PCDH11XQ9BZA7 1347 aa13.92□□□□□ -0.18
CHMP4A-206ENST00000533011 PCDH11YQ9BZA8 1340 aa13.92□□□□□ -0.18
CHMP4A-206ENST00000533011 RNF181Q9P0P0 153 aa13.92□□□□□ -0.18
CHMP4A-206ENST00000533011 FLT4P35916 1363 aa13.92□□□□□ -0.18
CHMP4A-206ENST00000533011 TAF1LQ8IZX4 1826 aa13.92□□□□□ -0.18
CHMP4A-206ENST00000533011 DPEP1P16444 411 aa13.91□□□□□ -0.18
CHMP4A-206ENST00000533011 TATP17735 454 aaPredicted RBP13.91□□□□□ -0.18
CHMP4A-206ENST00000533011 EMILIN1Q9Y6C2 1016 aa13.91□□□□□ -0.18
CHMP4A-206ENST00000533011 INSRP06213 1382 aa13.91□□□□□ -0.18
CHMP4A-206ENST00000533011 SMG6Q86US8 1419 aaKnown RBP13.9□□□□□ -0.18
CHMP4A-206ENST00000533011 KCPQ6ZWJ8 1503 aa13.9□□□□□ -0.18
CHMP4A-206ENST00000533011 KIF13BQ9NQT8 1826 aa13.9□□□□□ -0.18
CHMP4A-206ENST00000533011 HSP90AB2PQ58FF8 381 aa13.9□□□□□ -0.18
CHMP4A-206ENST00000533011 DALRD3Q5D0E6 543 aaKnown RBP13.9□□□□□ -0.18
CHMP4A-206ENST00000533011 TRAPPC3LQ5T215 181 aa13.9□□□□□ -0.18
CHMP4A-206ENST00000533011 AMIGO3Q86WK7 504 aa13.9□□□□□ -0.18
CHMP4A-206ENST00000533011 DCAF5Q96JK2 942 aa13.9□□□□□ -0.18
CHMP4A-206ENST00000533011 MAP2P11137 1827 aaKnown RBP13.9□□□□□ -0.18
CHMP4A-206ENST00000533011 WASHC2AQ641Q2 1341 aa13.9□□□□□ -0.19
CHMP4A-206ENST00000533011 LOC102724428A0A0B4J2F2 783 aa13.89□□□□□ -0.19
CHMP4A-206ENST00000533011 GNPATO15228 680 aa13.89□□□□□ -0.19
CHMP4A-206ENST00000533011 PPM1GO15355 546 aaPredicted RBP13.89□□□□□ -0.19
CHMP4A-206ENST00000533011 ADRA2BP18089 450 aa13.89□□□□□ -0.19
CHMP4A-206ENST00000533011 SIK1P57059 783 aa13.89□□□□□ -0.19
CHMP4A-206ENST00000533011 PARP3Q9Y6F1 533 aa13.89□□□□□ -0.19
CHMP4A-206ENST00000533011 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
CHMP4A-206ENST00000533011 RGPD2P0DJD1 1756 aa13.88□□□□□ -0.19
CHMP4A-206ENST00000533011 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
CHMP4A-206ENST00000533011 TNNT2P45379 298 aaPredicted RBP13.88□□□□□ -0.19
CHMP4A-206ENST00000533011 NBPF6Q5VWK0 638 aa13.88□□□□□ -0.19
CHMP4A-206ENST00000533011 NBPF4Q96M43 638 aa13.88□□□□□ -0.19
CHMP4A-206ENST00000533011 POLKQ9UBT6 870 aa13.88□□□□□ -0.19
CHMP4A-206ENST00000533011 MEGF6O75095 1541 aa13.88□□□□□ -0.19
CHMP4A-206ENST00000533011 GLTPD2A6NH11 291 aa13.87□□□□□ -0.19
CHMP4A-206ENST00000533011 PER1O15534 1290 aaPredicted RBP13.87□□□□□ -0.19
CHMP4A-206ENST00000533011 KCNA3P22001 575 aa13.87□□□□□ -0.19
CHMP4A-206ENST00000533011 CTCFP49711 727 aaPredicted RBP13.87□□□□□ -0.19
CHMP4A-206ENST00000533011 MORC1Q86VD1 984 aa13.87□□□□□ -0.19
CHMP4A-206ENST00000533011 CREBZFQ9NS37 354 aa13.87□□□□□ -0.19
CHMP4A-206ENST00000533011 RTCBQ9Y3I0 505 aaKnown RBP13.87□□□□□ -0.19
CHMP4A-206ENST00000533011 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
CHMP4A-206ENST00000533011 LINC00116Q8NCU8 138 aa13.86□□□□□ -0.19
CHMP4A-206ENST00000533011 PIGBQ92521 554 aa13.86□□□□□ -0.19
CHMP4A-206ENST00000533011 AIDAQ96BJ3 306 aa13.86□□□□□ -0.19
CHMP4A-206ENST00000533011 ATP6V1AP38606 617 aa13.85□□□□□ -0.19
CHMP4A-206ENST00000533011 NKX1-1Q15270 411 aaPredicted RBP13.85□□□□□ -0.19
CHMP4A-206ENST00000533011 SMIM5Q71RC9 77 aa13.85□□□□□ -0.19
CHMP4A-206ENST00000533011 TOGARAM1Q9Y4F4 1720 aa13.84□□□□□ -0.19
CHMP4A-206ENST00000533011 N4BP2Q86UW6 1770 aaPredicted RBP13.84□□□□□ -0.19
CHMP4A-206ENST00000533011 ARFGEF1Q9Y6D6 1849 aa13.84□□□□□ -0.19
CHMP4A-206ENST00000533011 KIAA1551Q9HCM1 1747 aa13.84□□□□□ -0.19
CHMP4A-206ENST00000533011 RFC4P35249 363 aa13.83□□□□□ -0.2
CHMP4A-206ENST00000533011 MLLT1Q03111 559 aaPredicted RBP13.83□□□□□ -0.2
CHMP4A-206ENST00000533011 FAM161AQ3B820 660 aa13.83□□□□□ -0.2
CHMP4A-206ENST00000533011 RC3H1Q5TC82 1133 aaKnown RBP13.83□□□□□ -0.2
CHMP4A-206ENST00000533011 DPY19L2Q6NUT2 758 aa13.83□□□□□ -0.2
CHMP4A-206ENST00000533011 USHBP1Q8N6Y0 703 aa13.83□□□□□ -0.2
CHMP4A-206ENST00000533011 PKD1L3Q7Z443 1732 aa13.83□□□□□ -0.2
CHMP4A-206ENST00000533011 FOXN1O15353 648 aa13.82□□□□□ -0.2
CHMP4A-206ENST00000533011 CYP27B1O15528 508 aa13.82□□□□□ -0.2
CHMP4A-206ENST00000533011 LMNB1P20700 586 aa13.82□□□□□ -0.2
CHMP4A-206ENST00000533011 RGS19P49795 217 aa13.82□□□□□ -0.2
CHMP4A-206ENST00000533011 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
CHMP4A-206ENST00000533011 GYS1P13807 737 aa13.81□□□□□ -0.2
CHMP4A-206ENST00000533011 CC2D1BQ5T0F9 858 aaKnown RBP13.81□□□□□ -0.2
CHMP4A-206ENST00000533011 ARHGEF1Q92888 912 aaKnown RBP13.81□□□□□ -0.2
CHMP4A-206ENST00000533011 SPG7Q9UQ90 795 aa13.81□□□□□ -0.2
CHMP4A-206ENST00000533011 NPC1L1Q9UHC9 1359 aa13.81□□□□□ -0.2
CHMP4A-206ENST00000533011 ITPK1Q13572 414 aa13.8□□□□□ -0.2
CHMP4A-206ENST00000533011 EIF4A2Q14240 407 aaKnown RBP13.8□□□□□ -0.2
CHMP4A-206ENST00000533011 ABHD8Q96I13 439 aa13.8□□□□□ -0.2
CHMP4A-206ENST00000533011 EYA1Q99502 592 aa13.8□□□□□ -0.2
CHMP4A-206ENST00000533011 BRCA1P38398 1863 aaKnown RBP13.8□□□□□ -0.2
CHMP4A-206ENST00000533011 NCAPD2Q15021 1401 aa13.8□□□□□ -0.2
CHMP4A-206ENST00000533011 RPS6KA4O75676 772 aa13.79□□□□□ -0.2
CHMP4A-206ENST00000533011 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■■■□ 21.7
CHMP4A-206ENST00000533011 MKRN1Q9UHC7 482 aaKnown RBP13.79□□□□□ -0.2
CHMP4A-206ENST00000533011 KDM6AO15550 1401 aaPredicted RBP13.79□□□□□ -0.2
CHMP4A-206ENST00000533011 CHADLQ6NUI6 762 aa13.78□□□□□ -0.2
CHMP4A-206ENST00000533011 C4AP0C0L4 1744 aa13.78□□□□□ -0.2
CHMP4A-206ENST00000533011 CNTNAP1P78357 1384 aa13.77□□□□□ -0.21
CHMP4A-206ENST00000533011 WBP1LQ9NX94 342 aa13.77□□□□□ -0.21
CHMP4A-206ENST00000533011 ASAP1Q9ULH1 1129 aa13.77□□□□□ -0.21
CHMP4A-206ENST00000533011 SBF1O95248 1867 aa13.76□□□□□ -0.21
CHMP4A-206ENST00000533011 ITGB4P16144 1822 aa13.76□□□□□ -0.21
CHMP4A-206ENST00000533011 CNTNAP4Q9C0A0 1308 aa13.76□□□□□ -0.21
CHMP4A-206ENST00000533011 MTHFSP49914 203 aa13.76□□□□□ -0.21
CHMP4A-206ENST00000533011 ZEB1P37275 1124 aaPredicted RBP13.75□□□□□ -0.21
CHMP4A-206ENST00000533011 LBX1P52954 281 aa13.75□□□□□ -0.21
CHMP4A-206ENST00000533011 CNGB1Q14028 1251 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms