RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 C4BP0C0L5 1744 aa31.25■■■□□ 2.59
LTBP3-220ENST00000532661 COL24A1Q17RW2 1714 aa31.25■■■□□ 2.59
LTBP3-220ENST00000532661 HMGB2P26583 209 aaKnown RBP31.25■■■□□ 2.59
LTBP3-220ENST00000532661 FLAD1Q8NFF5 587 aa31.24■■■□□ 2.59
LTBP3-220ENST00000532661 ATP6V1AP38606 617 aa31.23■■■□□ 2.59
LTBP3-220ENST00000532661 PHF14O94880 888 aa31.22■■■□□ 2.59
LTBP3-220ENST00000532661 C1orf141Q5JVX7 400 aa31.22■■■□□ 2.59
LTBP3-220ENST00000532661 HMOX1P09601 288 aa31.21■■■□□ 2.59
LTBP3-220ENST00000532661 CABP4P57796 275 aa31.21■■■□□ 2.59
LTBP3-220ENST00000532661 SLC4A9Q96Q91 983 aa31.2■■■□□ 2.59
LTBP3-220ENST00000532661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.19■■■□□ 2.58
LTBP3-220ENST00000532661 NPC1L1Q9UHC9 1359 aa31.18■■■□□ 2.58
LTBP3-220ENST00000532661 DIAPH1O60610 1272 aaKnown RBP31.18■■■□□ 2.58
LTBP3-220ENST00000532661 NLGN2Q8NFZ4 835 aa31.18■■■□□ 2.58
LTBP3-220ENST00000532661 RBM42Q9BTD8 480 aaKnown RBP31.18■■■□□ 2.58
LTBP3-220ENST00000532661 GNPATO15228 680 aa31.15■■■□□ 2.58
LTBP3-220ENST00000532661 NFATC2IPQ8NCF5 419 aa31.15■■■□□ 2.58
LTBP3-220ENST00000532661 SSFA2P28290 1259 aa31.14■■■□□ 2.58
LTBP3-220ENST00000532661 UBR3Q6ZT12 1888 aa31.13■■■□□ 2.57
LTBP3-220ENST00000532661 UTRNP46939 3433 aa31.12■■■□□ 2.57
LTBP3-220ENST00000532661 AKAP4Q5JQC9 854 aa31.12■■■□□ 2.57
LTBP3-220ENST00000532661 GPR162Q16538 588 aa31.11■■■□□ 2.57
LTBP3-220ENST00000532661 LGR6Q9HBX8 967 aa31.11■■■□□ 2.57
LTBP3-220ENST00000532661 COL3A1P02461 1466 aaPredicted RBP31.09■■■□□ 2.57
LTBP3-220ENST00000532661 PTCD1O75127 700 aaKnown RBP31.09■■■□□ 2.57
LTBP3-220ENST00000532661 MTHFSDQ2M296 383 aaKnown RBP31.09■■■□□ 2.57
LTBP3-220ENST00000532661 PELP1Q8IZL8 1130 aaKnown RBP31.09■■■□□ 2.57
LTBP3-220ENST00000532661 U2SURPO15042 1029 aaKnown RBP31.06■■■□□ 2.56
LTBP3-220ENST00000532661 RTCBQ9Y3I0 505 aaKnown RBP31.05■■■□□ 2.56
LTBP3-220ENST00000532661 RNMTO43148 476 aaKnown RBP31.04■■■□□ 2.56
LTBP3-220ENST00000532661 SLC52A2Q9HAB3 445 aa31.04■■■□□ 2.56
LTBP3-220ENST00000532661 RC3H1Q5TC82 1133 aaKnown RBP31.03■■■□□ 2.56
LTBP3-220ENST00000532661 CNTNAP4Q9C0A0 1308 aa31.02■■■□□ 2.56
LTBP3-220ENST00000532661 TRAPPC3LQ5T215 181 aa31.02■■■□□ 2.56
LTBP3-220ENST00000532661 CD2APQ9Y5K6 639 aa31.02■■■□□ 2.56
LTBP3-220ENST00000532661 ZNF831Q5JPB2 1677 aa31.02■■■□□ 2.56
LTBP3-220ENST00000532661 GOLGB1Q14789 3259 aaKnown RBP31.01■■■□□ 2.56
LTBP3-220ENST00000532661 SCN11AQ9UI33 1791 aa31.01■■■□□ 2.55
LTBP3-220ENST00000532661 ARHGEF1Q92888 912 aaKnown RBP31■■■□□ 2.55
LTBP3-220ENST00000532661 RPS6KA4O75676 772 aa30.99■■■□□ 2.55
LTBP3-220ENST00000532661 YBX3P16989 372 aaKnown RBP eCLIP30.99■■■□□ 2.55
LTBP3-220ENST00000532661 SLC39A6Q13433 755 aa30.98■■■□□ 2.55
LTBP3-220ENST00000532661 COL5A3P25940 1745 aaPredicted RBP30.98■■■□□ 2.55
LTBP3-220ENST00000532661 PPP2R1AP30153 589 aa30.96■■■□□ 2.55
LTBP3-220ENST00000532661 CRKLP46109 303 aaKnown RBP30.96■■■□□ 2.55
LTBP3-220ENST00000532661 MMP10P09238 476 aa30.95■■■□□ 2.55
LTBP3-220ENST00000532661 ADRA2BP18089 450 aa30.95■■■□□ 2.55
LTBP3-220ENST00000532661 MRC1P22897 1456 aa30.95■■■□□ 2.54
LTBP3-220ENST00000532661 CFAP53Q96M91 514 aa30.94■■■□□ 2.54
LTBP3-220ENST00000532661 RFC4P35249 363 aa30.93■■■□□ 2.54
LTBP3-220ENST00000532661 DNAJC10Q8IXB1 793 aa30.93■■■□□ 2.54
LTBP3-220ENST00000532661 ZNF784Q8NCA9 323 aaPredicted RBP30.93■■■□□ 2.54
LTBP3-220ENST00000532661 MYH14Q7Z406 1995 aaKnown RBP30.92■■■□□ 2.54
LTBP3-220ENST00000532661 TJP1Q07157 1748 aa30.91■■■□□ 2.54
LTBP3-220ENST00000532661 GYS1P13807 737 aa30.91■■■□□ 2.54
LTBP3-220ENST00000532661 INTS5Q6P9B9 1019 aaKnown RBP30.91■■■□□ 2.54
LTBP3-220ENST00000532661 NLGN1Q8N2Q7 840 aa30.91■■■□□ 2.54
LTBP3-220ENST00000532661 ADAMTS7Q9UKP4 1686 aa30.9■■■□□ 2.54
LTBP3-220ENST00000532661 PHACTR3Q96KR7 559 aa30.9■■■□□ 2.54
LTBP3-220ENST00000532661 PRKAR2BP31323 418 aa30.89■■■□□ 2.54
LTBP3-220ENST00000532661 IL17REQ8NFR9 667 aa30.89■■■□□ 2.54
LTBP3-220ENST00000532661 GAS2L2Q8NHY3 880 aa30.89■■■□□ 2.54
LTBP3-220ENST00000532661 RSPH6AQ9H0K4 717 aa30.89■■■□□ 2.54
LTBP3-220ENST00000532661 WWC3Q9ULE0 1092 aa30.89■■■□□ 2.54
LTBP3-220ENST00000532661 GNAT3A8MTJ3 354 aa30.88■■■□□ 2.53
LTBP3-220ENST00000532661 GRIN3BO60391 1043 aa30.88■■■□□ 2.53
LTBP3-220ENST00000532661 SRP68Q9UHB9 627 aaKnown RBP30.88■■■□□ 2.53
LTBP3-220ENST00000532661 CHD4Q14839 1912 aa30.87■■■□□ 2.53
LTBP3-220ENST00000532661 KCPQ6ZWJ8 1503 aa30.87■■■□□ 2.53
LTBP3-220ENST00000532661 NUDCQ9Y266 331 aa30.86■■■□□ 2.53
LTBP3-220ENST00000532661 CICQ96RK0 1608 aaPredicted RBP30.85■■■□□ 2.53
LTBP3-220ENST00000532661 CYP19A1P11511 503 aaPredicted RBP30.85■■■□□ 2.53
LTBP3-220ENST00000532661 CCDC87Q9NVE4 849 aa30.85■■■□□ 2.53
LTBP3-220ENST00000532661 VIRMAQ69YN4 1812 aaKnown RBP30.84■■■□□ 2.53
LTBP3-220ENST00000532661 U2AF1L5P0DN76 240 aaPredicted RBP30.84■■■□□ 2.53
LTBP3-220ENST00000532661 U2AF1Q01081 240 aaKnown RBP eCLIP30.84■■■□□ 2.53
LTBP3-220ENST00000532661 USP42Q9H9J4 1324 aaKnown RBP30.82■■■□□ 2.52
LTBP3-220ENST00000532661 TEFQ10587 303 aa30.82■■■□□ 2.52
LTBP3-220ENST00000532661 C4AP0C0L4 1744 aa30.81■■■□□ 2.52
LTBP3-220ENST00000532661 FKBP8Q14318 412 aa30.81■■■□□ 2.52
LTBP3-220ENST00000532661 SOS1Q07889 1333 aaPredicted RBP30.79■■■□□ 2.52
LTBP3-220ENST00000532661 TTC5Q8N0Z6 440 aa30.79■■■□□ 2.52
LTBP3-220ENST00000532661 VSIG10Q8N0Z9 540 aa30.79■■■□□ 2.52
LTBP3-220ENST00000532661 ZBTB1Q9Y2K1 713 aa30.79■■■□□ 2.52
LTBP3-220ENST00000532661 PARP3Q9Y6F1 533 aa30.79■■■□□ 2.52
LTBP3-220ENST00000532661 ZNF790Q6PG37 636 aa30.77■■■□□ 2.52
LTBP3-220ENST00000532661 ZNF496Q96IT1 587 aaPredicted RBP30.77■■■□□ 2.52
LTBP3-220ENST00000532661 PXDNLA1KZ92 1463 aa30.76■■■□□ 2.52
LTBP3-220ENST00000532661 C10orf71Q711Q0 1435 aa30.76■■■□□ 2.51
LTBP3-220ENST00000532661 FCHSD2O94868 740 aa30.76■■■□□ 2.51
LTBP3-220ENST00000532661 USPL1Q5W0Q7 1092 aa30.76■■■□□ 2.51
LTBP3-220ENST00000532661 CEMIPQ8WUJ3 1361 aa30.76■■■□□ 2.51
LTBP3-220ENST00000532661 A0A0G2JLW4 131 aa30.75■■■□□ 2.51
LTBP3-220ENST00000532661 DDR1Q08345 913 aa30.75■■■□□ 2.51
LTBP3-220ENST00000532661 KCNQ3O43525 872 aa30.73■■■□□ 2.51
LTBP3-220ENST00000532661 ZPR1O75312 459 aa30.73■■■□□ 2.51
LTBP3-220ENST00000532661 CANXP27824 592 aaKnown RBP30.73■■■□□ 2.51
LTBP3-220ENST00000532661 TGFB2P61812 414 aa30.73■■■□□ 2.51
LTBP3-220ENST00000532661 UBR2Q8IWV8 1755 aa30.73■■■□□ 2.51
LTBP3-220ENST00000532661 COL15A1P39059 1388 aa30.71■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms