RNA–Protein interactions for RNA: ENST00000532367.1

SMPD1-207, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 409 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-207ENST00000532367 SIPA1L3O60292 1781 aaPredicted RBP14.66□□□□□ -0.06
SMPD1-207ENST00000532367 ERVV-2B6SEH9 535 aa14.66□□□□□ -0.06
SMPD1-207ENST00000532367 FKBP8Q14318 412 aa14.66□□□□□ -0.06
SMPD1-207ENST00000532367 ALDH1L2Q3SY69 923 aa14.66□□□□□ -0.06
SMPD1-207ENST00000532367 FBXO41Q8TF61 875 aa14.66□□□□□ -0.06
SMPD1-207ENST00000532367 SLC52A2Q9HAB3 445 aa14.66□□□□□ -0.06
SMPD1-207ENST00000532367 ELL2O00472 640 aaPredicted RBP14.65□□□□□ -0.06
SMPD1-207ENST00000532367 BCAR3O75815 825 aa14.65□□□□□ -0.06
SMPD1-207ENST00000532367 CABP4P57796 275 aa14.65□□□□□ -0.06
SMPD1-207ENST00000532367 DDB1Q16531 1140 aa14.65□□□□□ -0.06
SMPD1-207ENST00000532367 TSPYL6Q8N831 410 aa14.65□□□□□ -0.06
SMPD1-207ENST00000532367 KDM3BQ7LBC6 1761 aa14.65□□□□□ -0.06
SMPD1-207ENST00000532367 SOS1Q07889 1333 aaPredicted RBP14.65□□□□□ -0.06
SMPD1-207ENST00000532367 ERICH6BQ5W0A0 696 aa14.64□□□□□ -0.07
SMPD1-207ENST00000532367 NFATC2IPQ8NCF5 419 aa14.64□□□□□ -0.07
SMPD1-207ENST00000532367 TNS2Q63HR2 1409 aa14.64□□□□□ -0.07
SMPD1-207ENST00000532367 MRC1P22897 1456 aa14.63□□□□□ -0.07
SMPD1-207ENST00000532367 SSH1Q8WYL5 1049 aa14.63□□□□□ -0.07
SMPD1-207ENST00000532367 SMC4Q9NTJ3 1288 aa14.63□□□□□ -0.07
SMPD1-207ENST00000532367 TRPC5Q9UL62 973 aaPredicted RBP14.63□□□□□ -0.07
SMPD1-207ENST00000532367 PLIN1O60240 522 aa14.62□□□□□ -0.07
SMPD1-207ENST00000532367 EIF4A1P60842 406 aaKnown RBP14.62□□□□□ -0.07
SMPD1-207ENST00000532367 IRX6P78412 446 aaPredicted RBP14.62□□□□□ -0.07
SMPD1-207ENST00000532367 FAM98CQ17RN3 349 aaKnown RBP14.62□□□□□ -0.07
SMPD1-207ENST00000532367 KRT24Q2M2I5 525 aa14.62□□□□□ -0.07
SMPD1-207ENST00000532367 CHMP4AQ9BY43 222 aa14.62□□□□□ -0.07
SMPD1-207ENST00000532367 CANXP27824 592 aaKnown RBP14.61□□□□□ -0.07
SMPD1-207ENST00000532367 BRPF1P55201 1214 aaPredicted RBP14.61□□□□□ -0.07
SMPD1-207ENST00000532367 GJD4Q96KN9 370 aaPredicted RBP14.61□□□□□ -0.07
SMPD1-207ENST00000532367 ATRNO75882 1429 aa14.6□□□□□ -0.07
SMPD1-207ENST00000532367 KCNQ3O43525 872 aa14.6□□□□□ -0.07
SMPD1-207ENST00000532367 HOXB7P09629 217 aa14.6□□□□□ -0.07
SMPD1-207ENST00000532367 ZNF790Q6PG37 636 aa14.6□□□□□ -0.07
SMPD1-207ENST00000532367 BCL2L13Q9BXK5 485 aa14.6□□□□□ -0.07
SMPD1-207ENST00000532367 IPO8O15397 1037 aaKnown RBP14.59□□□□□ -0.07
SMPD1-207ENST00000532367 MS4A1P11836 297 aa14.59□□□□□ -0.07
SMPD1-207ENST00000532367 TTC5Q8N0Z6 440 aa14.59□□□□□ -0.07
SMPD1-207ENST00000532367 MRPL50Q8N5N7 158 aaKnown RBP14.59□□□□□ -0.07
SMPD1-207ENST00000532367 FRAT1Q92837 279 aaPredicted RBP14.59□□□□□ -0.07
SMPD1-207ENST00000532367 QTRT2Q9H974 415 aaKnown RBP14.59□□□□□ -0.07
SMPD1-207ENST00000532367 KIF16BQ96L93 1317 aa14.59□□□□□ -0.07
SMPD1-207ENST00000532367 PDE3AQ14432 1141 aa14.58□□□□□ -0.08
SMPD1-207ENST00000532367 CCDC30Q5VVM6 783 aa14.58□□□□□ -0.08
SMPD1-207ENST00000532367 ZKSCAN2Q63HK3 967 aa14.58□□□□□ -0.08
SMPD1-207ENST00000532367 TMOD3Q9NYL9 352 aa14.58□□□□□ -0.08
SMPD1-207ENST00000532367 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.08
SMPD1-207ENST00000532367 GLI3P10071 1580 aa14.57□□□□□ -0.08
SMPD1-207ENST00000532367 A0A0G2JS52 829 aa14.57□□□□□ -0.08
SMPD1-207ENST00000532367 MYT1Q01538 1121 aa14.57□□□□□ -0.08
SMPD1-207ENST00000532367 SLC39A6Q13433 755 aa14.57□□□□□ -0.08
SMPD1-207ENST00000532367 MARCH10Q8NA82 808 aaPredicted RBP14.57□□□□□ -0.08
SMPD1-207ENST00000532367 HEG1Q9ULI3 1381 aa14.57□□□□□ -0.08
SMPD1-207ENST00000532367 CACNA1FO60840 1977 aa14.56□□□□□ -0.08
SMPD1-207ENST00000532367 ONECUT3O60422 494 aaPredicted RBP14.56□□□□□ -0.08
SMPD1-207ENST00000532367 GIGYF1O75420 1035 aaPredicted RBP14.56□□□□□ -0.08
SMPD1-207ENST00000532367 ZNF772Q68DY9 489 aaPredicted RBP14.56□□□□□ -0.08
SMPD1-207ENST00000532367 ARHGAP45Q92619 1136 aa14.56□□□□□ -0.08
SMPD1-207ENST00000532367 FMNL2Q96PY5 1086 aa14.56□□□□□ -0.08
SMPD1-207ENST00000532367 STK31Q9BXU1 1019 aa14.56□□□□□ -0.08
SMPD1-207ENST00000532367 NOB1Q9ULX3 412 aaKnown RBP14.56□□□□□ -0.08
SMPD1-207ENST00000532367 ITGB4P16144 1822 aa14.56□□□□□ -0.08
SMPD1-207ENST00000532367 KAT6BQ8WYB5 2073 aa14.56□□□□□ -0.08
SMPD1-207ENST00000532367 THSD7AQ9UPZ6 1657 aa14.55□□□□□ -0.08
SMPD1-207ENST00000532367 TCERG1O14776 1098 aaKnown RBP14.55□□□□□ -0.08
SMPD1-207ENST00000532367 C20orf194Q5TEA3 1177 aa14.55□□□□□ -0.08
SMPD1-207ENST00000532367 HDGFL1Q5TGJ6 251 aa14.55□□□□□ -0.08
SMPD1-207ENST00000532367 ATF7IPQ6VMQ6 1270 aa14.55□□□□□ -0.08
SMPD1-207ENST00000532367 SLC4A2P04920 1241 aa14.54□□□□□ -0.08
SMPD1-207ENST00000532367 PIGBQ92521 554 aa14.54□□□□□ -0.08
SMPD1-207ENST00000532367 ZNF496Q96IT1 587 aaPredicted RBP14.54□□□□□ -0.08
SMPD1-207ENST00000532367 CRBNQ96SW2 442 aa14.54□□□□□ -0.08
SMPD1-207ENST00000532367 PAPPAQ13219 1627 aa14.53□□□□□ -0.08
SMPD1-207ENST00000532367 SNRPA1P09661 255 aaKnown RBP14.53□□□□□ -0.08
SMPD1-207ENST00000532367 EIF2S2P20042 333 aaKnown RBP14.53□□□□□ -0.08
SMPD1-207ENST00000532367 API5Q9BZZ5 524 aaKnown RBP14.53□□□□□ -0.08
SMPD1-207ENST00000532367 DOT1LQ8TEK3 1739 aa14.52□□□□□ -0.08
SMPD1-207ENST00000532367 BCL9O00512 1426 aa14.52□□□□□ -0.08
SMPD1-207ENST00000532367 PTPRCP08575 1304 aa14.52□□□□□ -0.08
SMPD1-207ENST00000532367 TRIM27P14373 513 aa14.52□□□□□ -0.09
SMPD1-207ENST00000532367 PRIM1P49642 420 aaKnown RBP14.52□□□□□ -0.09
SMPD1-207ENST00000532367 FTSJ3Q8IY81 847 aaKnown RBP14.52□□□□□ -0.09
SMPD1-207ENST00000532367 SEPT12Q8IYM1 358 aa14.52□□□□□ -0.09
SMPD1-207ENST00000532367 DZIP1LQ8IYY4 767 aaKnown RBP14.52□□□□□ -0.09
SMPD1-207ENST00000532367 EXOC6Q8TAG9 804 aa14.52□□□□□ -0.09
SMPD1-207ENST00000532367 NECTIN2Q92692 538 aa14.52□□□□□ -0.09
SMPD1-207ENST00000532367 SYTL4Q96C24 671 aaPredicted RBP14.52□□□□□ -0.09
SMPD1-207ENST00000532367 PPP4R2Q9NY27 417 aa14.52□□□□□ -0.09
SMPD1-207ENST00000532367 UBR2Q8IWV8 1755 aa14.52□□□□□ -0.09
SMPD1-207ENST00000532367 PANK1Q8TE04 598 aa14.51□□□□□ -0.09
SMPD1-207ENST00000532367 RBM6P78332 1123 aaKnown RBP14.5□□□□□ -0.09
SMPD1-207ENST00000532367 CLUAP1Q96AJ1 413 aa14.5□□□□□ -0.09
SMPD1-207ENST00000532367 ACSBG1Q96GR2 724 aa14.5□□□□□ -0.09
SMPD1-207ENST00000532367 ATG3Q9NT62 314 aa14.5□□□□□ -0.09
SMPD1-207ENST00000532367 DBF4Q9UBU7 674 aaPredicted RBP14.5□□□□□ -0.09
SMPD1-207ENST00000532367 PRAMEF22A3QJZ6 481 aa14.49□□□□□ -0.09
SMPD1-207ENST00000532367 VSIG10Q8N0Z9 540 aa14.49□□□□□ -0.09
SMPD1-207ENST00000532367 ASAP1Q9ULH1 1129 aa14.49□□□□□ -0.09
SMPD1-207ENST00000532367 TNNQ9UQP3 1299 aa14.49□□□□□ -0.09
SMPD1-207ENST00000532367 KCPQ6ZWJ8 1503 aa14.49□□□□□ -0.09
SMPD1-207ENST00000532367 C5P01031 1676 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms