RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 MYOM1P52179 1685 aa7.89□□□□□ -1.15
HMGB1P42-201ENST00000532126 LMO7Q8WWI1 1683 aa7.89□□□□□ -1.15
HMGB1P42-201ENST00000532126 CRB1P82279 1406 aa7.89□□□□□ -1.15
HMGB1P42-201ENST00000532126 MAP3K19Q56UN5 1328 aa7.89□□□□□ -1.15
HMGB1P42-201ENST00000532126 WDR17Q8IZU2 1322 aa7.89□□□□□ -1.15
HMGB1P42-201ENST00000532126 AMPHP49418 695 aa7.89□□□□□ -1.15
HMGB1P42-201ENST00000532126 KRT27Q7Z3Y8 459 aa7.89□□□□□ -1.15
HMGB1P42-201ENST00000532126 TMEM106CQ9BVX2 250 aa7.89□□□□□ -1.15
HMGB1P42-201ENST00000532126 THRAP3Q9Y2W1 955 aaKnown RBP7.89□□□□□ -1.15
HMGB1P42-201ENST00000532126 USP54Q70EL1 1684 aa7.89□□□□□ -1.15
HMGB1P42-201ENST00000532126 FBLN1P23142 703 aa7.88□□□□□ -1.15
HMGB1P42-201ENST00000532126 PPP1R15BQ5SWA1 713 aa7.88□□□□□ -1.15
HMGB1P42-201ENST00000532126 ANKRD24Q8TF21 1146 aa7.88□□□□□ -1.15
HMGB1P42-201ENST00000532126 IP6K1Q92551 441 aa7.88□□□□□ -1.15
HMGB1P42-201ENST00000532126 UPF1Q92900 1129 aaKnown RBP eCLIP7.88□□□□□ -1.15
HMGB1P42-201ENST00000532126 KNSTRNQ9Y448 316 aa7.88□□□□□ -1.15
HMGB1P42-201ENST00000532126 ABCC6O95255 1503 aa7.88□□□□□ -1.15
HMGB1P42-201ENST00000532126 BLMP54132 1417 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P42-201ENST00000532126 CCDC7Q96M83 1385 aa7.87□□□□□ -1.15
HMGB1P42-201ENST00000532126 ERBB3P21860 1342 aa7.87□□□□□ -1.15
HMGB1P42-201ENST00000532126 WASHC2AQ641Q2 1341 aa7.87□□□□□ -1.15
HMGB1P42-201ENST00000532126 HOXC9P31274 260 aa7.87□□□□□ -1.15
HMGB1P42-201ENST00000532126 RRS1Q15050 365 aaKnown RBP7.87□□□□□ -1.15
HMGB1P42-201ENST00000532126 FBXW7Q969H0 707 aa7.87□□□□□ -1.15
HMGB1P42-201ENST00000532126 LTV1Q96GA3 475 aaPredicted RBP7.87□□□□□ -1.15
HMGB1P42-201ENST00000532126 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
HMGB1P42-201ENST00000532126 NLRP2Q9NX02 1062 aa7.87□□□□□ -1.15
HMGB1P42-201ENST00000532126 SPDYE16A6NNV3 312 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P42-201ENST00000532126 TNNT2P45379 298 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P42-201ENST00000532126 PDE3BQ13370 1112 aa7.86□□□□□ -1.15
HMGB1P42-201ENST00000532126 MCM6Q14566 821 aa7.86□□□□□ -1.15
HMGB1P42-201ENST00000532126 AMHR2Q16671 573 aa7.86□□□□□ -1.15
HMGB1P42-201ENST00000532126 CDCA7Q9BWT1 371 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P42-201ENST00000532126 COL18A1P39060 1754 aa7.86□□□□□ -1.15
HMGB1P42-201ENST00000532126 RTL1A6NKG5 1358 aa7.85□□□□□ -1.15
HMGB1P42-201ENST00000532126 NSD2O96028 1365 aa7.85□□□□□ -1.15
HMGB1P42-201ENST00000532126 PPM1GO15355 546 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P42-201ENST00000532126 ZEB1P37275 1124 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P42-201ENST00000532126 MORC1Q86VD1 984 aa7.85□□□□□ -1.15
HMGB1P42-201ENST00000532126 CCDC125Q86Z20 511 aa7.85□□□□□ -1.15
HMGB1P42-201ENST00000532126 PIP4P2Q8N4L2 257 aa7.85□□□□□ -1.15
HMGB1P42-201ENST00000532126 RETREG2Q8NC44 543 aa7.85□□□□□ -1.15
HMGB1P42-201ENST00000532126 PHF12Q96QT6 1004 aa7.85□□□□□ -1.15
HMGB1P42-201ENST00000532126 GPHNQ9NQX3 736 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P42-201ENST00000532126 KIF24Q5T7B8 1368 aa7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 THSD7AQ9UPZ6 1657 aa7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 DPYSL4O14531 572 aa7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 DDB1Q16531 1140 aa7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 HSP90AB2PQ58FF8 381 aa7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 FAM182BQ5T319 152 aa7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 FOXD4L5Q5VV16 416 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 FOXD4L4Q8WXT5 416 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 EMILIN1Q9Y6C2 1016 aa7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 KIF20BQ96Q89 1820 aa7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 SMG6Q86US8 1419 aaKnown RBP7.84□□□□□ -1.15
HMGB1P42-201ENST00000532126 INSRP06213 1382 aa7.84□□□□□ -1.16
HMGB1P42-201ENST00000532126 FLT4P35916 1363 aa7.84□□□□□ -1.16
HMGB1P42-201ENST00000532126 EXOC5O00471 708 aa7.83□□□□□ -1.16
HMGB1P42-201ENST00000532126 PER1O15534 1290 aaPredicted RBP7.83□□□□□ -1.16
HMGB1P42-201ENST00000532126 IL2RBP14784 551 aa7.83□□□□□ -1.16
HMGB1P42-201ENST00000532126 CD44P16070 742 aaKnown RBP7.83□□□□□ -1.16
HMGB1P42-201ENST00000532126 MAP2K5Q13163 448 aa7.83□□□□□ -1.16
HMGB1P42-201ENST00000532126 SF3B2Q13435 895 aaKnown RBP7.83□□□□□ -1.16
HMGB1P42-201ENST00000532126 FAM196AQ6ZSG2 479 aa7.83□□□□□ -1.16
HMGB1P42-201ENST00000532126 POLKQ9UBT6 870 aa7.83□□□□□ -1.16
HMGB1P42-201ENST00000532126 LTN1O94822 1766 aa7.82□□□□□ -1.16
HMGB1P42-201ENST00000532126 CC2D1BQ5T0F9 858 aaKnown RBP7.82□□□□□ -1.16
HMGB1P42-201ENST00000532126 PARP9Q8IXQ6 854 aa7.82□□□□□ -1.16
HMGB1P42-201ENST00000532126 DISP2A7MBM2 1401 aa7.81□□□□□ -1.16
HMGB1P42-201ENST00000532126 CNGB1Q14028 1251 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P42-201ENST00000532126 PDIA6Q15084 440 aa7.81□□□□□ -1.16
HMGB1P42-201ENST00000532126 NBPF6Q5VWK0 638 aa7.81□□□□□ -1.16
HMGB1P42-201ENST00000532126 NBPF4Q96M43 638 aa7.81□□□□□ -1.16
HMGB1P42-201ENST00000532126 EMILIN3Q9NT22 766 aa7.81□□□□□ -1.16
HMGB1P42-201ENST00000532126 BRWD3Q6RI45 1802 aa7.8□□□□□ -1.16
HMGB1P42-201ENST00000532126 OVOS2A0A0G2JMS6 1433 aa7.8□□□□□ -1.16
HMGB1P42-201ENST00000532126 RGPD5Q99666 1765 aa7.8□□□□□ -1.16
HMGB1P42-201ENST00000532126 TRIM37O94972 964 aa7.8□□□□□ -1.16
HMGB1P42-201ENST00000532126 USHBP1Q8N6Y0 703 aa7.8□□□□□ -1.16
HMGB1P42-201ENST00000532126 MARCH10Q8NA82 808 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P42-201ENST00000532126 RAPGEF4Q8WZA2 1011 aa7.8□□□□□ -1.16
HMGB1P42-201ENST00000532126 CCDC102AQ96A19 550 aa7.8□□□□□ -1.16
HMGB1P42-201ENST00000532126 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGB1P42-201ENST00000532126 LRRC37A3O60309 1634 aa7.79□□□□□ -1.16
HMGB1P42-201ENST00000532126 PEAK1Q9H792 1746 aa7.79□□□□□ -1.16
HMGB1P42-201ENST00000532126 PARP4Q9UKK3 1724 aaKnown RBP7.79□□□□□ -1.16
HMGB1P42-201ENST00000532126 DEFB132Q7Z7B7 95 aa7.79□□□□□ -1.16
HMGB1P42-201ENST00000532126 TRPC6Q9Y210 931 aa7.79□□□□□ -1.16
HMGB1P42-201ENST00000532126 NPC1L1Q9UHC9 1359 aa7.79□□□□□ -1.16
HMGB1P42-201ENST00000532126 TNS2Q63HR2 1409 aa7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 IRF6O14896 467 aa7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 EIF5BO60841 1220 aaKnown RBP7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 APBA3O96018 575 aa7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 TATP17735 454 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 BAG6P46379 1132 aa7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 DSG2Q14126 1118 aa7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 EIF4A2Q14240 407 aaKnown RBP7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 DDX54Q8TDD1 881 aaKnown RBP7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 MS4A3Q96HJ5 214 aa7.78□□□□□ -1.16
HMGB1P42-201ENST00000532126 EYA1Q99502 592 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms