RNA–Protein interactions for RNA: ENST00000531749.1

LINC02548-201, Transcript of long intergenic non-protein coding RNA 2548, humanhuman

TSL 3 BASIC

Gene LINC02548, Length 484 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02548-201ENST00000531749 ANKRD26Q9UPS8 1709 aa13.26□□□□□ -0.29
LINC02548-201ENST00000531749 MMP10P09238 476 aa13.25□□□□□ -0.29
LINC02548-201ENST00000531749 EIF4A2Q14240 407 aaKnown RBP13.25□□□□□ -0.29
LINC02548-201ENST00000531749 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
LINC02548-201ENST00000531749 TMOD3Q9NYL9 352 aa13.25□□□□□ -0.29
LINC02548-201ENST00000531749 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
LINC02548-201ENST00000531749 A0A0G2JLW4 131 aa13.24□□□□□ -0.29
LINC02548-201ENST00000531749 ARHGEF1Q92888 912 aaKnown RBP13.24□□□□□ -0.29
LINC02548-201ENST00000531749 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
LINC02548-201ENST00000531749 KDRP35968 1356 aa13.23□□□□□ -0.29
LINC02548-201ENST00000531749 HMGB2P26583 209 aaKnown RBP13.23□□□□□ -0.29
LINC02548-201ENST00000531749 KCNA3P22001 575 aa13.22□□□□□ -0.29
LINC02548-201ENST00000531749 CDCA8Q53HL2 280 aa13.22□□□□□ -0.29
LINC02548-201ENST00000531749 CICQ96RK0 1608 aaPredicted RBP13.21□□□□□ -0.29
LINC02548-201ENST00000531749 GYS1P13807 737 aa13.21□□□□□ -0.29
LINC02548-201ENST00000531749 DPEP1P16444 411 aa13.21□□□□□ -0.29
LINC02548-201ENST00000531749 TNNT2P45379 298 aaPredicted RBP13.21□□□□□ -0.29
LINC02548-201ENST00000531749 TRAPPC3LQ5T215 181 aa13.21□□□□□ -0.29
LINC02548-201ENST00000531749 DNAJC5GQ8N7S2 189 aa13.21□□□□□ -0.29
LINC02548-201ENST00000531749 RBM42Q9BTD8 480 aaKnown RBP13.21□□□□□ -0.29
LINC02548-201ENST00000531749 TGFB2P61812 414 aa13.2□□□□□ -0.3
LINC02548-201ENST00000531749 RC3H1Q5TC82 1133 aaKnown RBP13.2□□□□□ -0.3
LINC02548-201ENST00000531749 BCS1LQ9Y276 419 aa13.2□□□□□ -0.3
LINC02548-201ENST00000531749 COL5A3P25940 1745 aaPredicted RBP13.19□□□□□ -0.3
LINC02548-201ENST00000531749 BRCA1P38398 1863 aaKnown RBP13.19□□□□□ -0.3
LINC02548-201ENST00000531749 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
LINC02548-201ENST00000531749 RPS6KA4O75676 772 aa13.19□□□□□ -0.3
LINC02548-201ENST00000531749 NLGN1Q8N2Q7 840 aa13.19□□□□□ -0.3
LINC02548-201ENST00000531749 NMRK2Q9NPI5 230 aa13.19□□□□□ -0.3
LINC02548-201ENST00000531749 RTCBQ9Y3I0 505 aaKnown RBP13.19□□□□□ -0.3
LINC02548-201ENST00000531749 KDM6AO15550 1401 aaPredicted RBP13.19□□□□□ -0.3
LINC02548-201ENST00000531749 AEBP1Q8IUX7 1158 aa13.18□□□□□ -0.3
LINC02548-201ENST00000531749 C10orf71Q711Q0 1435 aa13.18□□□□□ -0.3
LINC02548-201ENST00000531749 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
LINC02548-201ENST00000531749 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
LINC02548-201ENST00000531749 SRP68Q9UHB9 627 aaKnown RBP13.17□□□□□ -0.3
LINC02548-201ENST00000531749 C4AP0C0L4 1744 aa13.16□□□□□ -0.3
LINC02548-201ENST00000531749 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
LINC02548-201ENST00000531749 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
LINC02548-201ENST00000531749 PTCD1O75127 700 aaKnown RBP13.15□□□□□ -0.3
LINC02548-201ENST00000531749 TOMM70O94826 608 aa13.15□□□□□ -0.3
LINC02548-201ENST00000531749 FCHSD2O94868 740 aa13.15□□□□□ -0.3
LINC02548-201ENST00000531749 DDR1Q08345 913 aa13.15□□□□□ -0.3
LINC02548-201ENST00000531749 FKBP8Q14318 412 aa13.15□□□□□ -0.3
LINC02548-201ENST00000531749 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
LINC02548-201ENST00000531749 POLR3GLQ9BT43 218 aa13.15□□□□□ -0.3
LINC02548-201ENST00000531749 SBF1O95248 1867 aa13.14□□□□□ -0.31
LINC02548-201ENST00000531749 ADRA2BP18089 450 aa13.14□□□□□ -0.31
LINC02548-201ENST00000531749 RFC4P35249 363 aa13.14□□□□□ -0.31
LINC02548-201ENST00000531749 CABP4P57796 275 aa13.14□□□□□ -0.31
LINC02548-201ENST00000531749 HTRA3P83110 453 aa13.14□□□□□ -0.31
LINC02548-201ENST00000531749 PLEKHO1Q53GL0 409 aaPredicted RBP13.14□□□□□ -0.31
LINC02548-201ENST00000531749 ZNF530Q6P9A1 599 aaPredicted RBP13.14□□□□□ -0.31
LINC02548-201ENST00000531749 PANK3Q9H999 370 aa13.14□□□□□ -0.31
LINC02548-201ENST00000531749 ADAMTS7Q9UKP4 1686 aa13.14□□□□□ -0.31
LINC02548-201ENST00000531749 ARFGEF1Q9Y6D6 1849 aa13.13□□□□□ -0.31
LINC02548-201ENST00000531749 TM4SF1P30408 202 aa13.13□□□□□ -0.31
LINC02548-201ENST00000531749 CRKLP46109 303 aaKnown RBP13.13□□□□□ -0.31
LINC02548-201ENST00000531749 C9orf131Q5VYM1 1079 aa13.13□□□□□ -0.31
LINC02548-201ENST00000531749 INTS5Q6P9B9 1019 aaKnown RBP13.13□□□□□ -0.31
LINC02548-201ENST00000531749 CCDC87Q9NVE4 849 aa13.13□□□□□ -0.31
LINC02548-201ENST00000531749 PARP3Q9Y6F1 533 aa13.13□□□□□ -0.31
LINC02548-201ENST00000531749 CHRNA5P30532 468 aa13.12□□□□□ -0.31
LINC02548-201ENST00000531749 MTHFSP49914 203 aa13.12□□□□□ -0.31
LINC02548-201ENST00000531749 APLP1P51693 650 aa13.12□□□□□ -0.31
LINC02548-201ENST00000531749 LGR6Q9HBX8 967 aa13.12□□□□□ -0.31
LINC02548-201ENST00000531749 TJP1Q07157 1748 aa13.12□□□□□ -0.31
LINC02548-201ENST00000531749 PLEKHG2Q9H7P9 1386 aa13.11□□□□□ -0.31
LINC02548-201ENST00000531749 HSP90AB1P08238 724 aaKnown RBP13.11□□□□□ -0.31
LINC02548-201ENST00000531749 PRELPP51888 382 aa13.11□□□□□ -0.31
LINC02548-201ENST00000531749 PIM2Q9P1W9 311 aa13.11□□□□□ -0.31
LINC02548-201ENST00000531749 USP42Q9H9J4 1324 aaKnown RBP13.11□□□□□ -0.31
LINC02548-201ENST00000531749 POLRMTO00411 1230 aaKnown RBP13.1□□□□□ -0.31
LINC02548-201ENST00000531749 HSPA5P11021 654 aaKnown RBP13.1□□□□□ -0.31
LINC02548-201ENST00000531749 IL13P35225 146 aa13.1□□□□□ -0.31
LINC02548-201ENST00000531749 TRIM26Q12899 539 aaPredicted RBP13.1□□□□□ -0.31
LINC02548-201ENST00000531749 AMOTQ4VCS5 1084 aa13.1□□□□□ -0.31
LINC02548-201ENST00000531749 SULT6B1Q6IMI4 303 aa13.1□□□□□ -0.31
LINC02548-201ENST00000531749 DNAJC10Q8IXB1 793 aa13.1□□□□□ -0.31
LINC02548-201ENST00000531749 SCN11AQ9UI33 1791 aa13.09□□□□□ -0.31
LINC02548-201ENST00000531749 BCL2L12Q9HB09 334 aa13.09□□□□□ -0.31
LINC02548-201ENST00000531749 RRAGCQ9HB90 399 aa13.09□□□□□ -0.31
LINC02548-201ENST00000531749 TIMELESSQ9UNS1 1208 aa13.09□□□□□ -0.31
LINC02548-201ENST00000531749 KCPQ6ZWJ8 1503 aa13.08□□□□□ -0.31
LINC02548-201ENST00000531749 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
LINC02548-201ENST00000531749 DALRD3Q5D0E6 543 aaKnown RBP13.08□□□□□ -0.32
LINC02548-201ENST00000531749 USPL1Q5W0Q7 1092 aa13.08□□□□□ -0.32
LINC02548-201ENST00000531749 RBM46Q8TBY0 533 aaKnown RBP13.08□□□□□ -0.32
LINC02548-201ENST00000531749 AFDNP55196 1824 aaKnown RBP13.08□□□□□ -0.32
LINC02548-201ENST00000531749 WDR90Q96KV7 1748 aa13.08□□□□□ -0.32
LINC02548-201ENST00000531749 MORC1Q86VD1 984 aa13.07□□□□□ -0.32
LINC02548-201ENST00000531749 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
LINC02548-201ENST00000531749 CYP19A1P11511 503 aaPredicted RBP13.06□□□□□ -0.32
LINC02548-201ENST00000531749 NFIXQ14938 502 aa13.06□□□□□ -0.32
LINC02548-201ENST00000531749 C1orf141Q5JVX7 400 aa13.06□□□□□ -0.32
LINC02548-201ENST00000531749 RNF181Q9P0P0 153 aa13.06□□□□□ -0.32
LINC02548-201ENST00000531749 VIRMAQ69YN4 1812 aaKnown RBP13.06□□□□□ -0.32
LINC02548-201ENST00000531749 RASSF7Q02833 373 aa13.05□□□□□ -0.32
LINC02548-201ENST00000531749 COL13A1Q5TAT6 717 aaPredicted RBP13.05□□□□□ -0.32
LINC02548-201ENST00000531749 JMYQ8N9B5 988 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms