RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 LCE3BQ5TA77 95 aa4.4□□□□□ -1.71
RC3H1-206ENST00000531594 CC2D2BQ6DHV5 1058 aa4.4□□□□□ -1.71
RC3H1-206ENST00000531594 TAS1R3Q7RTX0 852 aa4.4□□□□□ -1.71
RC3H1-206ENST00000531594 SEPT12Q8IYM1 358 aa4.4□□□□□ -1.71
RC3H1-206ENST00000531594 ABHD17AQ96GS6 310 aa4.4□□□□□ -1.71
RC3H1-206ENST00000531594 NLRP3Q96P20 1036 aa4.4□□□□□ -1.71
RC3H1-206ENST00000531594 GGA1Q9UJY5 639 aa4.4□□□□□ -1.71
RC3H1-206ENST00000531594 NSFL1CQ9UNZ2 370 aaKnown RBP4.4□□□□□ -1.71
RC3H1-206ENST00000531594 TRAK2O60296 914 aa4.39□□□□□ -1.71
RC3H1-206ENST00000531594 IL2RAP01589 272 aa4.39□□□□□ -1.71
RC3H1-206ENST00000531594 AMPD1P23109 780 aa4.39□□□□□ -1.71
RC3H1-206ENST00000531594 DGKGP49619 791 aa4.39□□□□□ -1.71
RC3H1-206ENST00000531594 SKIV2LQ15477 1246 aaKnown RBP4.39□□□□□ -1.71
RC3H1-206ENST00000531594 CFHR5Q9BXR6 569 aa4.39□□□□□ -1.71
RC3H1-206ENST00000531594 BNIP3LO60238 219 aa4.38□□□□□ -1.71
RC3H1-206ENST00000531594 SH3D19Q5HYK7 790 aa4.38□□□□□ -1.71
RC3H1-206ENST00000531594 ZMYM1Q5SVZ6 1142 aa4.38□□□□□ -1.71
RC3H1-206ENST00000531594 SLCO4C1Q6ZQN7 724 aa4.38□□□□□ -1.71
RC3H1-206ENST00000531594 GOLGA6L1Q8N7Z2 621 aa4.38□□□□□ -1.71
RC3H1-206ENST00000531594 FAM117AQ9C073 453 aa4.38□□□□□ -1.71
RC3H1-206ENST00000531594 GPBP1L1Q9HC44 474 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-206ENST00000531594 NDFIP2Q9NV92 336 aa4.38□□□□□ -1.71
RC3H1-206ENST00000531594 GDF2Q9UK05 429 aaPredicted RBP4.38□□□□□ -1.71
RC3H1-206ENST00000531594 NEURL1BA8MQ27 555 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 GNB5O14775 395 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 EPXP11678 715 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 BMP4P12644 408 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 CENPCQ03188 943 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 C4orf17Q53FE4 359 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 WDR44Q5JSH3 913 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 CYP2U1Q7Z449 544 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 CNKSR1Q969H4 720 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 BTBD6Q96KE9 485 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 KRTAP9-4Q9BYQ2 154 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 KLF15Q9UIH9 416 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 ATP1B4Q9UN42 357 aaPredicted RBP4.37□□□□□ -1.71
RC3H1-206ENST00000531594 PCDHB11Q9Y5F2 797 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 HRH3Q9Y5N1 445 aa4.37□□□□□ -1.71
RC3H1-206ENST00000531594 ZBBXA8MT70 800 aa4.36□□□□□ -1.71
RC3H1-206ENST00000531594 FGFR3P22607 806 aa4.36□□□□□ -1.71
RC3H1-206ENST00000531594 MSX1P28360 303 aa4.36□□□□□ -1.71
RC3H1-206ENST00000531594 RFC5P40937 340 aa4.36□□□□□ -1.71
RC3H1-206ENST00000531594 ALYREFQ86V81 257 aaKnown RBP4.36□□□□□ -1.71
RC3H1-206ENST00000531594 RNF135Q8IUD6 432 aa4.36□□□□□ -1.71
RC3H1-206ENST00000531594 TRIM11Q96F44 468 aa4.36□□□□□ -1.71
RC3H1-206ENST00000531594 GJD4Q96KN9 370 aaPredicted RBP4.36□□□□□ -1.71
RC3H1-206ENST00000531594 CDCA7Q9BWT1 371 aaPredicted RBP4.36□□□□□ -1.71
RC3H1-206ENST00000531594 FHDC1Q9C0D6 1143 aaPredicted RBP4.36□□□□□ -1.71
RC3H1-206ENST00000531594 A0A1B0GTH6 734 aa4.35□□□□□ -1.71
RC3H1-206ENST00000531594 GPR37L1O60883 481 aa4.35□□□□□ -1.71
RC3H1-206ENST00000531594 RSPO4Q2I0M5 234 aaPredicted RBP4.35□□□□□ -1.71
RC3H1-206ENST00000531594 ESYT1Q9BSJ8 1104 aa4.35□□□□□ -1.71
RC3H1-206ENST00000531594 DNAAF2Q9NVR5 837 aaKnown RBP4.35□□□□□ -1.71
RC3H1-206ENST00000531594 ATXN7L1Q9ULK2 861 aaPredicted RBP4.35□□□□□ -1.71
RC3H1-206ENST00000531594 CHSY3Q70JA7 882 aa4.34□□□□□ -1.71
RC3H1-206ENST00000531594 FCHSD1Q86WN1 690 aa4.34□□□□□ -1.71
RC3H1-206ENST00000531594 KRTAP19-1Q8IUB9 90 aa4.34□□□□□ -1.71
RC3H1-206ENST00000531594 ZSCAN10Q96SZ4 725 aaPredicted RBP4.34□□□□□ -1.71
RC3H1-206ENST00000531594 PHF24Q9UPV7 400 aa4.34□□□□□ -1.71
RC3H1-206ENST00000531594 NKAPLQ5M9Q1 402 aa4.33□□□□□ -1.72
RC3H1-206ENST00000531594 PNMA1Q8ND90 353 aa4.33□□□□□ -1.72
RC3H1-206ENST00000531594 CCDC85AQ96PX6 553 aaPredicted RBP4.33□□□□□ -1.72
RC3H1-206ENST00000531594 KDM4CQ9H3R0 1056 aa4.33□□□□□ -1.72
RC3H1-206ENST00000531594 SCO2A0A1W2PP80 73 aa4.32□□□□□ -1.72
RC3H1-206ENST00000531594 DCDC2BA2VCK2 349 aa4.32□□□□□ -1.72
RC3H1-206ENST00000531594 ATP4AP20648 1035 aa4.32□□□□□ -1.72
RC3H1-206ENST00000531594 GATA4P43694 442 aa4.32□□□□□ -1.72
RC3H1-206ENST00000531594 TSGA10IPQ3SY00 556 aa4.32□□□□□ -1.72
RC3H1-206ENST00000531594 TPSG1Q9NRR2 321 aa4.32□□□□□ -1.72
RC3H1-206ENST00000531594 FAM229AH3BQW9 127 aa4.31□□□□□ -1.72
RC3H1-206ENST00000531594 GNRH1P01148 92 aa4.31□□□□□ -1.72
RC3H1-206ENST00000531594 CSB-PGBD3P0DP91 1061 aa4.31□□□□□ -1.72
RC3H1-206ENST00000531594 ARAFP10398 606 aa4.31□□□□□ -1.72
RC3H1-206ENST00000531594 CD33P20138 364 aa4.31□□□□□ -1.72
RC3H1-206ENST00000531594 EFHC2Q5JST6 749 aa4.31□□□□□ -1.72
RC3H1-206ENST00000531594 TMEM214Q6NUQ4 689 aaKnown RBP4.31□□□□□ -1.72
RC3H1-206ENST00000531594 PGBD3Q8N328 593 aa4.31□□□□□ -1.72
RC3H1-206ENST00000531594 XAGE2Q96GT9 111 aa4.31□□□□□ -1.72
RC3H1-206ENST00000531594 PLVAPQ9BX97 442 aa4.31□□□□□ -1.72
RC3H1-206ENST00000531594 ZCCHC2Q9C0B9 1178 aaKnown RBP4.31□□□□□ -1.72
RC3H1-206ENST00000531594 ETNK1Q9HBU6 452 aa4.31□□□□□ -1.72
RC3H1-206ENST00000531594 DYRK3O43781 588 aa4.3□□□□□ -1.72
RC3H1-206ENST00000531594 PLA2G4AP47712 749 aa4.3□□□□□ -1.72
RC3H1-206ENST00000531594 PCBP4P57723 403 aaKnown RBP4.3□□□□□ -1.72
RC3H1-206ENST00000531594 LBRQ14739 615 aaKnown RBP4.3□□□□□ -1.72
RC3H1-206ENST00000531594 GNASQ5JWF2 1037 aa4.3□□□□□ -1.72
RC3H1-206ENST00000531594 RNF20Q5VTR2 975 aa4.3□□□□□ -1.72
RC3H1-206ENST00000531594 CRISPLD1Q9H336 500 aa4.3□□□□□ -1.72
RC3H1-206ENST00000531594 NOP53Q9NZM5 478 aaKnown RBP4.3□□□□□ -1.72
RC3H1-206ENST00000531594 NR1H3Q13133 447 aa4.29□□□□□ -1.72
RC3H1-206ENST00000531594 RHBDD1Q8TEB9 315 aa4.29□□□□□ -1.72
RC3H1-206ENST00000531594 STRN4Q9NRL3 753 aa4.29□□□□□ -1.72
RC3H1-206ENST00000531594 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
RC3H1-206ENST00000531594 MAPTP10636 758 aaKnown RBP4.28□□□□□ -1.72
RC3H1-206ENST00000531594 TNP2Q05952 138 aa4.28□□□□□ -1.72
RC3H1-206ENST00000531594 COL9A3Q14050 684 aaPredicted RBP4.28□□□□□ -1.72
RC3H1-206ENST00000531594 TLR1Q15399 786 aa4.28□□□□□ -1.72
RC3H1-206ENST00000531594 PRSS36Q5K4E3 855 aa4.28□□□□□ -1.72
RC3H1-206ENST00000531594 ARTNQ5T4W7 220 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms