RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 CNKSR1Q969H4 720 aa10.9□□□□□ -0.66
CASP4-210ENST00000531546 NDUFB9Q9Y6M9 179 aa10.9□□□□□ -0.66
CASP4-210ENST00000531546 PROCP04070 461 aa10.89□□□□□ -0.67
CASP4-210ENST00000531546 ITGB2P05107 769 aa10.89□□□□□ -0.67
CASP4-210ENST00000531546 GDF2Q9UK05 429 aaPredicted RBP10.89□□□□□ -0.67
CASP4-210ENST00000531546 MKL2Q9ULH7 1088 aa10.89□□□□□ -0.67
CASP4-210ENST00000531546 GNASQ5JWF2 1037 aa10.88□□□□□ -0.67
CASP4-210ENST00000531546 ZSCAN10Q96SZ4 725 aaPredicted RBP10.88□□□□□ -0.67
CASP4-210ENST00000531546 GPAMQ9HCL2 828 aa10.88□□□□□ -0.67
CASP4-210ENST00000531546 CSB-PGBD3P0DP91 1061 aa10.87□□□□□ -0.67
CASP4-210ENST00000531546 CENPCQ03188 943 aa10.87□□□□□ -0.67
CASP4-210ENST00000531546 PGBD3Q8N328 593 aa10.87□□□□□ -0.67
CASP4-210ENST00000531546 BANK1Q8NDB2 785 aa10.87□□□□□ -0.67
CASP4-210ENST00000531546 IL2RAP01589 272 aa10.86□□□□□ -0.67
CASP4-210ENST00000531546 BCANQ96GW7 911 aa10.86□□□□□ -0.67
CASP4-210ENST00000531546 THBS1P07996 1170 aa10.85□□□□□ -0.67
CASP4-210ENST00000531546 GOLGA6L1Q8N7Z2 621 aa10.85□□□□□ -0.67
CASP4-210ENST00000531546 PHKA2P46019 1235 aa10.84□□□□□ -0.67
CASP4-210ENST00000531546 SNRPNP63162 240 aaKnown RBP10.84□□□□□ -0.67
CASP4-210ENST00000531546 ESCO1Q5FWF5 840 aa10.84□□□□□ -0.67
CASP4-210ENST00000531546 EFHC2Q5JST6 749 aa10.84□□□□□ -0.67
CASP4-210ENST00000531546 TMEM214Q6NUQ4 689 aaKnown RBP10.84□□□□□ -0.67
CASP4-210ENST00000531546 KLRG1Q96E93 195 aa10.84□□□□□ -0.67
CASP4-210ENST00000531546 SHISA8B8ZZ34 492 aa10.83□□□□□ -0.68
CASP4-210ENST00000531546 RRAGCQ9HB90 399 aa10.83□□□□□ -0.68
CASP4-210ENST00000531546 ATXN7L1Q9ULK2 861 aaPredicted RBP10.83□□□□□ -0.68
CASP4-210ENST00000531546 HRH3Q9Y5N1 445 aa10.83□□□□□ -0.68
CASP4-210ENST00000531546 PIK3R2O00459 728 aa10.82□□□□□ -0.68
CASP4-210ENST00000531546 GPR37L1O60883 481 aa10.82□□□□□ -0.68
CASP4-210ENST00000531546 NEUROD2Q15784 382 aa10.82□□□□□ -0.68
CASP4-210ENST00000531546 IL27Q8NEV9 243 aa10.82□□□□□ -0.68
CASP4-210ENST00000531546 EDARADDQ8WWZ3 215 aa10.82□□□□□ -0.68
CASP4-210ENST00000531546 XAGE2Q96GT9 111 aa10.82□□□□□ -0.68
CASP4-210ENST00000531546 K7ELQ4 463 aaPredicted RBP10.81□□□□□ -0.68
CASP4-210ENST00000531546 MTMR14Q8NCE2 650 aa10.81□□□□□ -0.68
CASP4-210ENST00000531546 FHDC1Q9C0D6 1143 aaPredicted RBP10.81□□□□□ -0.68
CASP4-210ENST00000531546 BMP4P12644 408 aa10.8□□□□□ -0.68
CASP4-210ENST00000531546 C4orf17Q53FE4 359 aa10.8□□□□□ -0.68
CASP4-210ENST00000531546 RUBCNLQ9H714 662 aa10.8□□□□□ -0.68
CASP4-210ENST00000531546 CEP126Q9P2H0 1117 aa10.8□□□□□ -0.68
CASP4-210ENST00000531546 KRBA1A5PL33 1030 aa10.79□□□□□ -0.68
CASP4-210ENST00000531546 UBAP2LQ14157 1087 aaKnown RBP10.79□□□□□ -0.68
CASP4-210ENST00000531546 XP32Q5T750 250 aa10.79□□□□□ -0.68
CASP4-210ENST00000531546 SLCO4C1Q6ZQN7 724 aa10.79□□□□□ -0.68
CASP4-210ENST00000531546 C1orf229Q6ZS94 237 aaPredicted RBP10.79□□□□□ -0.68
CASP4-210ENST00000531546 RHBDD1Q8TEB9 315 aa10.79□□□□□ -0.68
CASP4-210ENST00000531546 CCDC85AQ96PX6 553 aaPredicted RBP10.79□□□□□ -0.68
CASP4-210ENST00000531546 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
CASP4-210ENST00000531546 AMPD1P23109 780 aa10.78□□□□□ -0.68
CASP4-210ENST00000531546 MSX1P28360 303 aa10.78□□□□□ -0.68
CASP4-210ENST00000531546 BAG6P46379 1132 aa10.78□□□□□ -0.68
CASP4-210ENST00000531546 CDCA7Q9BWT1 371 aaPredicted RBP10.78□□□□□ -0.68
CASP4-210ENST00000531546 FGFR3P22607 806 aa10.77□□□□□ -0.69
CASP4-210ENST00000531546 USP4Q13107 963 aa10.76□□□□□ -0.69
CASP4-210ENST00000531546 CRISPLD1Q9H336 500 aa10.76□□□□□ -0.69
CASP4-210ENST00000531546 DOLKQ9UPQ8 538 aa10.76□□□□□ -0.69
CASP4-210ENST00000531546 COL8A1P27658 744 aa10.75□□□□□ -0.69
CASP4-210ENST00000531546 GRIN2CQ14957 1233 aa10.75□□□□□ -0.69
CASP4-210ENST00000531546 TLR1Q15399 786 aa10.75□□□□□ -0.69
CASP4-210ENST00000531546 FIGNL1Q6PIW4 674 aa10.75□□□□□ -0.69
CASP4-210ENST00000531546 ABHD17AQ96GS6 310 aa10.75□□□□□ -0.69
CASP4-210ENST00000531546 GNB5O14775 395 aa10.74□□□□□ -0.69
CASP4-210ENST00000531546 EIF4G2P78344 907 aaKnown RBP eCLIP10.74□□□□□ -0.69
CASP4-210ENST00000531546 TBC1D9Q6ZT07 1266 aa10.74□□□□□ -0.69
CASP4-210ENST00000531546 PPARGC1BQ86YN6 1023 aaKnown RBP10.74□□□□□ -0.69
CASP4-210ENST00000531546 SIRT1Q96EB6 747 aa10.74□□□□□ -0.69
CASP4-210ENST00000531546 NDFIP2Q9NV92 336 aa10.74□□□□□ -0.69
CASP4-210ENST00000531546 GGA1Q9UJY5 639 aa10.74□□□□□ -0.69
CASP4-210ENST00000531546 PRM3Q9NNZ6 103 aa10.73□□□□□ -0.69
CASP4-210ENST00000531546 BNIP3LO60238 219 aa10.72□□□□□ -0.69
CASP4-210ENST00000531546 ARAFP10398 606 aa10.72□□□□□ -0.69
CASP4-210ENST00000531546 SLFNL1Q499Z3 407 aa10.72□□□□□ -0.69
CASP4-210ENST00000531546 C1orf216Q8TAB5 229 aa10.72□□□□□ -0.69
CASP4-210ENST00000531546 ETNK1Q9HBU6 452 aa10.72□□□□□ -0.69
CASP4-210ENST00000531546 NOP53Q9NZM5 478 aaKnown RBP10.72□□□□□ -0.69
CASP4-210ENST00000531546 CCDC180Q9P1Z9 1646 aa10.72□□□□□ -0.69
CASP4-210ENST00000531546 LINC00114Q6XXX2 140 aa10.71□□□□□ -0.69
CASP4-210ENST00000531546 SNRKQ9NRH2 765 aa10.71□□□□□ -0.69
CASP4-210ENST00000531546 C2CD2LO14523 706 aa10.7□□□□□ -0.7
CASP4-210ENST00000531546 EPXP11678 715 aa10.7□□□□□ -0.7
CASP4-210ENST00000531546 PLA2G4AP47712 749 aa10.7□□□□□ -0.7
CASP4-210ENST00000531546 HOXB4P17483 251 aaPredicted RBP10.69□□□□□ -0.7
CASP4-210ENST00000531546 CTBSQ01459 385 aa10.69□□□□□ -0.7
CASP4-210ENST00000531546 NLRP8Q86W28 1048 aa10.69□□□□□ -0.7
CASP4-210ENST00000531546 RNF135Q8IUD6 432 aa10.69□□□□□ -0.7
CASP4-210ENST00000531546 OXLD1Q5BKU9 147 aa10.68□□□□□ -0.7
CASP4-210ENST00000531546 SUV39H2Q9H5I1 410 aa10.68□□□□□ -0.7
CASP4-210ENST00000531546 PCDHGC4Q9Y5F7 938 aa10.68□□□□□ -0.7
CASP4-210ENST00000531546 FURINP09958 794 aa10.67□□□□□ -0.7
CASP4-210ENST00000531546 DGKGP49619 791 aa10.67□□□□□ -0.7
CASP4-210ENST00000531546 PHTF2Q8N3S3 785 aa10.67□□□□□ -0.7
CASP4-210ENST00000531546 BTBD6Q96KE9 485 aa10.67□□□□□ -0.7
CASP4-210ENST00000531546 NIFKQ9BYG3 293 aaKnown RBP10.66□□□□□ -0.7
CASP4-210ENST00000531546 DNAAF2Q9NVR5 837 aaKnown RBP10.66□□□□□ -0.7
CASP4-210ENST00000531546 TBC1D2BQ9UPU7 963 aa10.66□□□□□ -0.7
CASP4-210ENST00000531546 NEURL1BA8MQ27 555 aa10.65□□□□□ -0.7
CASP4-210ENST00000531546 INHAP05111 366 aa10.65□□□□□ -0.7
CASP4-210ENST00000531546 ATP4AP20648 1035 aa10.65□□□□□ -0.7
CASP4-210ENST00000531546 ZCCHC2Q9C0B9 1178 aaKnown RBP10.65□□□□□ -0.7
CASP4-210ENST00000531546 AVENQ9NQS1 362 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms