RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 RFC4P35249 363 aa18.3■□□□□ 0.52
SSH3-207ENST00000531495 ARHGAP27Q6ZUM4 889 aa18.3■□□□□ 0.52
SSH3-207ENST00000531495 POLKQ9UBT6 870 aa18.3■□□□□ 0.52
SSH3-207ENST00000531495 KIF3CO14782 793 aa18.29■□□□□ 0.52
SSH3-207ENST00000531495 APLP1P51693 650 aa18.29■□□□□ 0.52
SSH3-207ENST00000531495 RC3H1Q5TC82 1133 aaKnown RBP18.29■□□□□ 0.52
SSH3-207ENST00000531495 PARP3Q9Y6F1 533 aa18.29■□□□□ 0.52
SSH3-207ENST00000531495 A0A0G2JLW4 131 aa18.28■□□□□ 0.52
SSH3-207ENST00000531495 TOMM70O94826 608 aa18.28■□□□□ 0.52
SSH3-207ENST00000531495 PLEKHO1Q53GL0 409 aaPredicted RBP18.28■□□□□ 0.52
SSH3-207ENST00000531495 POLR3GLQ9BT43 218 aa18.28■□□□□ 0.52
SSH3-207ENST00000531495 TAF1LQ8IZX4 1826 aa18.28■□□□□ 0.52
SSH3-207ENST00000531495 NCAPD2Q15021 1401 aa18.27■□□□□ 0.52
SSH3-207ENST00000531495 FCHSD2O94868 740 aa18.27■□□□□ 0.52
SSH3-207ENST00000531495 TNNT2P45379 298 aaPredicted RBP18.27■□□□□ 0.52
SSH3-207ENST00000531495 CABP4P57796 275 aa18.27■□□□□ 0.52
SSH3-207ENST00000531495 ARHGEF1Q92888 912 aaKnown RBP18.27■□□□□ 0.52
SSH3-207ENST00000531495 DCAF5Q96JK2 942 aa18.27■□□□□ 0.52
SSH3-207ENST00000531495 RPS6KA4O75676 772 aa18.26■□□□□ 0.51
SSH3-207ENST00000531495 EIF4A2Q14240 407 aaKnown RBP18.26■□□□□ 0.51
SSH3-207ENST00000531495 AMOTQ4VCS5 1084 aa18.25■□□□□ 0.51
SSH3-207ENST00000531495 ITGB4P16144 1822 aa18.24■□□□□ 0.51
SSH3-207ENST00000531495 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
SSH3-207ENST00000531495 TIMELESSQ9UNS1 1208 aa18.24■□□□□ 0.51
SSH3-207ENST00000531495 PLEKHG2Q9H7P9 1386 aa18.24■□□□□ 0.51
SSH3-207ENST00000531495 KIF20BQ96Q89 1820 aa18.23■□□□□ 0.51
SSH3-207ENST00000531495 UBR3Q6ZT12 1888 aa18.23■□□□□ 0.51
SSH3-207ENST00000531495 DPEP1P16444 411 aa18.23■□□□□ 0.51
SSH3-207ENST00000531495 CNTNAP4Q9C0A0 1308 aa18.23■□□□□ 0.51
SSH3-207ENST00000531495 CEP350Q5VT06 3117 aa18.22■□□□□ 0.51
SSH3-207ENST00000531495 GYS1P13807 737 aa18.22■□□□□ 0.51
SSH3-207ENST00000531495 MTHFSP49914 203 aa18.22■□□□□ 0.51
SSH3-207ENST00000531495 C1orf141Q5JVX7 400 aa18.22■□□□□ 0.51
SSH3-207ENST00000531495 PIM2Q9P1W9 311 aa18.22■□□□□ 0.51
SSH3-207ENST00000531495 PKD1L3Q7Z443 1732 aa18.22■□□□□ 0.51
SSH3-207ENST00000531495 TOGARAM1Q9Y4F4 1720 aa18.21■□□□□ 0.51
SSH3-207ENST00000531495 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
SSH3-207ENST00000531495 PXDNLA1KZ92 1463 aa18.2■□□□□ 0.5
SSH3-207ENST00000531495 PTCD1O75127 700 aaKnown RBP18.2■□□□□ 0.5
SSH3-207ENST00000531495 SLC4A9Q96Q91 983 aa18.2■□□□□ 0.5
SSH3-207ENST00000531495 DALRD3Q5D0E6 543 aaKnown RBP18.19■□□□□ 0.5
SSH3-207ENST00000531495 C9orf131Q5VYM1 1079 aa18.19■□□□□ 0.5
SSH3-207ENST00000531495 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
SSH3-207ENST00000531495 RBM46Q8TBY0 533 aaKnown RBP18.18■□□□□ 0.5
SSH3-207ENST00000531495 NMRK2Q9NPI5 230 aa18.18■□□□□ 0.5
SSH3-207ENST00000531495 KDM2BQ8NHM5 1336 aa18.18■□□□□ 0.5
SSH3-207ENST00000531495 KDRP35968 1356 aa18.17■□□□□ 0.5
SSH3-207ENST00000531495 NFATC2IPQ8NCF5 419 aa18.17■□□□□ 0.5
SSH3-207ENST00000531495 C10orf71Q711Q0 1435 aa18.16■□□□□ 0.5
SSH3-207ENST00000531495 CRKLP46109 303 aaKnown RBP18.16■□□□□ 0.5
SSH3-207ENST00000531495 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
SSH3-207ENST00000531495 DNAJC5GQ8N7S2 189 aa18.16■□□□□ 0.5
SSH3-207ENST00000531495 CICQ96RK0 1608 aaPredicted RBP18.16■□□□□ 0.5
SSH3-207ENST00000531495 FSTL1Q12841 308 aa18.15■□□□□ 0.5
SSH3-207ENST00000531495 MORC1Q86VD1 984 aa18.15■□□□□ 0.5
SSH3-207ENST00000531495 ZPR1O75312 459 aa18.14■□□□□ 0.49
SSH3-207ENST00000531495 KCNA3P22001 575 aa18.14■□□□□ 0.49
SSH3-207ENST00000531495 PANK3Q9H999 370 aa18.14■□□□□ 0.49
SSH3-207ENST00000531495 FKBP8Q14318 412 aa18.13■□□□□ 0.49
SSH3-207ENST00000531495 RNF181Q9P0P0 153 aa18.13■□□□□ 0.49
SSH3-207ENST00000531495 SRP68Q9UHB9 627 aaKnown RBP18.13■□□□□ 0.49
SSH3-207ENST00000531495 SULT6B1Q6IMI4 303 aa18.12■□□□□ 0.49
SSH3-207ENST00000531495 EIF4G2P78344 907 aaKnown RBP eCLIP18.11■□□□□ 0.49
SSH3-207ENST00000531495 USP42Q9H9J4 1324 aaKnown RBP18.11■□□□□ 0.49
SSH3-207ENST00000531495 RRAGCQ9HB90 399 aa18.1■□□□□ 0.49
SSH3-207ENST00000531495 ANKRD26Q9UPS8 1709 aa18.09■□□□□ 0.49
SSH3-207ENST00000531495 CHRNA5P30532 468 aa18.09■□□□□ 0.49
SSH3-207ENST00000531495 AEBP1Q8IUX7 1158 aa18.09■□□□□ 0.49
SSH3-207ENST00000531495 KLRG1Q96E93 195 aa18.09■□□□□ 0.49
SSH3-207ENST00000531495 KDM6AO15550 1401 aaPredicted RBP18.08■□□□□ 0.49
SSH3-207ENST00000531495 TM4SF1P30408 202 aa18.08■□□□□ 0.48
SSH3-207ENST00000531495 DDR1Q08345 913 aa18.08■□□□□ 0.48
SSH3-207ENST00000531495 AKAP4Q5JQC9 854 aa18.08■□□□□ 0.48
SSH3-207ENST00000531495 INTS5Q6P9B9 1019 aaKnown RBP18.08■□□□□ 0.48
SSH3-207ENST00000531495 KNSTRNQ9Y448 316 aa18.08■□□□□ 0.48
SSH3-207ENST00000531495 N4BP2Q86UW6 1770 aaPredicted RBP18.08■□□□□ 0.48
SSH3-207ENST00000531495 C4AP0C0L4 1744 aa18.08■□□□□ 0.48
SSH3-207ENST00000531495 KIF13BQ9NQT8 1826 aa18.07■□□□□ 0.48
SSH3-207ENST00000531495 POLRMTO00411 1230 aaKnown RBP18.07■□□□□ 0.48
SSH3-207ENST00000531495 USPL1Q5W0Q7 1092 aa18.07■□□□□ 0.48
SSH3-207ENST00000531495 SMC1BQ8NDV3 1235 aa18.07■□□□□ 0.48
SSH3-207ENST00000531495 ZNF831Q5JPB2 1677 aa18.06■□□□□ 0.48
SSH3-207ENST00000531495 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
SSH3-207ENST00000531495 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
SSH3-207ENST00000531495 SLC52A2Q9HAB3 445 aa18.05■□□□□ 0.48
SSH3-207ENST00000531495 ZC3H4Q9UPT8 1303 aaKnown RBP18.04■□□□□ 0.48
SSH3-207ENST00000531495 JMYQ8N9B5 988 aa18.04■□□□□ 0.48
SSH3-207ENST00000531495 NARFQ9UHQ1 456 aa18.04■□□□□ 0.48
SSH3-207ENST00000531495 HSPA5P11021 654 aaKnown RBP18.03■□□□□ 0.48
SSH3-207ENST00000531495 VEGFAP15692 232 aaPredicted RBP18.03■□□□□ 0.48
SSH3-207ENST00000531495 LMNB1P20700 586 aa18.03■□□□□ 0.48
SSH3-207ENST00000531495 IL13P35225 146 aa18.03■□□□□ 0.48
SSH3-207ENST00000531495 HTRA3P83110 453 aa18.03■□□□□ 0.48
SSH3-207ENST00000531495 TTLL6Q8N841 843 aa18.03■□□□□ 0.48
SSH3-207ENST00000531495 CYP19A1P11511 503 aaPredicted RBP18.02■□□□□ 0.48
SSH3-207ENST00000531495 NFIXQ14938 502 aa18.02■□□□□ 0.48
SSH3-207ENST00000531495 PCGF6Q9BYE7 350 aa18.02■□□□□ 0.48
SSH3-207ENST00000531495 KCPQ6ZWJ8 1503 aa18.02■□□□□ 0.47
SSH3-207ENST00000531495 SOS1Q07889 1333 aaPredicted RBP18.01■□□□□ 0.47
SSH3-207ENST00000531495 H0YIN7 160 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms