RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 C10orf71Q711Q0 1435 aa14.98□□□□□ -0.01
TM9SF1-210ENST00000530563 TONSLQ96HA7 1378 aa14.98□□□□□ -0.01
TM9SF1-210ENST00000530563 ATP6V1AP38606 617 aa14.97□□□□□ -0.01
TM9SF1-210ENST00000530563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.97□□□□□ -0.01
TM9SF1-210ENST00000530563 N4BP2Q86UW6 1770 aaPredicted RBP14.97□□□□□ -0.01
TM9SF1-210ENST00000530563 PHKG2P15735 406 aa14.96□□□□□ -0.01
TM9SF1-210ENST00000530563 DPEP1P16444 411 aa14.96□□□□□ -0.01
TM9SF1-210ENST00000530563 EYA1Q99502 592 aa14.96□□□□□ -0.01
TM9SF1-210ENST00000530563 TMOD3Q9NYL9 352 aa14.96□□□□□ -0.01
TM9SF1-210ENST00000530563 SPG7Q9UQ90 795 aa14.96□□□□□ -0.01
TM9SF1-210ENST00000530563 BCS1LQ9Y276 419 aa14.96□□□□□ -0.01
TM9SF1-210ENST00000530563 KDRP35968 1356 aa14.96□□□□□ -0.02
TM9SF1-210ENST00000530563 HTRA3P83110 453 aa14.95□□□□□ -0.02
TM9SF1-210ENST00000530563 ARHGAP27Q6ZUM4 889 aa14.95□□□□□ -0.02
TM9SF1-210ENST00000530563 NLGN1Q8N2Q7 840 aa14.95□□□□□ -0.02
TM9SF1-210ENST00000530563 JMYQ8N9B5 988 aa14.95□□□□□ -0.02
TM9SF1-210ENST00000530563 RBM46Q8TBY0 533 aaKnown RBP14.95□□□□□ -0.02
TM9SF1-210ENST00000530563 WASHC2AQ641Q2 1341 aa14.94□□□□□ -0.02
TM9SF1-210ENST00000530563 GYS1P13807 737 aa14.94□□□□□ -0.02
TM9SF1-210ENST00000530563 TMF1P82094 1093 aa14.94□□□□□ -0.02
TM9SF1-210ENST00000530563 TRAPPC3LQ5T215 181 aa14.94□□□□□ -0.02
TM9SF1-210ENST00000530563 COL13A1Q5TAT6 717 aaPredicted RBP14.94□□□□□ -0.02
TM9SF1-210ENST00000530563 ARHGEF1Q92888 912 aaKnown RBP14.94□□□□□ -0.02
TM9SF1-210ENST00000530563 BRCA1P38398 1863 aaKnown RBP14.93□□□□□ -0.02
TM9SF1-210ENST00000530563 WDR90Q96KV7 1748 aa14.93□□□□□ -0.02
TM9SF1-210ENST00000530563 RC3H1Q5TC82 1133 aaKnown RBP14.93□□□□□ -0.02
TM9SF1-210ENST00000530563 IFNL2Q8IZJ0 200 aa14.93□□□□□ -0.02
TM9SF1-210ENST00000530563 KLRG1Q96E93 195 aa14.93□□□□□ -0.02
TM9SF1-210ENST00000530563 KIF20BQ96Q89 1820 aa14.93□□□□□ -0.02
TM9SF1-210ENST00000530563 ANKRD26Q9UPS8 1709 aa14.92□□□□□ -0.02
TM9SF1-210ENST00000530563 C9orf131Q5VYM1 1079 aa14.92□□□□□ -0.02
TM9SF1-210ENST00000530563 RTCBQ9Y3I0 505 aaKnown RBP14.92□□□□□ -0.02
TM9SF1-210ENST00000530563 C4AP0C0L4 1744 aa14.92□□□□□ -0.02
TM9SF1-210ENST00000530563 ZNF831Q5JPB2 1677 aa14.91□□□□□ -0.02
TM9SF1-210ENST00000530563 FCHSD2O94868 740 aa14.91□□□□□ -0.02
TM9SF1-210ENST00000530563 ADRA2BP18089 450 aa14.91□□□□□ -0.02
TM9SF1-210ENST00000530563 RPS6KA4O75676 772 aa14.9□□□□□ -0.02
TM9SF1-210ENST00000530563 FSTL1Q12841 308 aa14.9□□□□□ -0.02
TM9SF1-210ENST00000530563 DCAF5Q96JK2 942 aa14.9□□□□□ -0.02
TM9SF1-210ENST00000530563 POLKQ9UBT6 870 aa14.9□□□□□ -0.02
TM9SF1-210ENST00000530563 CNTNAP4Q9C0A0 1308 aa14.9□□□□□ -0.02
TM9SF1-210ENST00000530563 PPM1GO15355 546 aaPredicted RBP14.89□□□□□ -0.03
TM9SF1-210ENST00000530563 CCDC87Q9NVE4 849 aa14.89□□□□□ -0.03
TM9SF1-210ENST00000530563 COL5A3P25940 1745 aaPredicted RBP14.89□□□□□ -0.03
TM9SF1-210ENST00000530563 ARFGEF1Q9Y6D6 1849 aa14.88□□□□□ -0.03
TM9SF1-210ENST00000530563 MYH14Q7Z406 1995 aaKnown RBP14.88□□□□□ -0.03
TM9SF1-210ENST00000530563 ERVV-2B6SEH9 535 aa14.88□□□□□ -0.03
TM9SF1-210ENST00000530563 KCPQ6ZWJ8 1503 aa14.87□□□□□ -0.03
TM9SF1-210ENST00000530563 PLEKHG2Q9H7P9 1386 aa14.87□□□□□ -0.03
TM9SF1-210ENST00000530563 DDR1Q08345 913 aa14.87□□□□□ -0.03
TM9SF1-210ENST00000530563 PIM2Q9P1W9 311 aa14.87□□□□□ -0.03
TM9SF1-210ENST00000530563 PARP3Q9Y6F1 533 aa14.87□□□□□ -0.03
TM9SF1-210ENST00000530563 RFC4P35249 363 aa14.86□□□□□ -0.03
TM9SF1-210ENST00000530563 EIF4A2Q14240 407 aaKnown RBP14.86□□□□□ -0.03
TM9SF1-210ENST00000530563 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
TM9SF1-210ENST00000530563 RRAGCQ9HB90 399 aa14.86□□□□□ -0.03
TM9SF1-210ENST00000530563 FKBP8Q14318 412 aa14.85□□□□□ -0.03
TM9SF1-210ENST00000530563 SRP68Q9UHB9 627 aaKnown RBP14.85□□□□□ -0.03
TM9SF1-210ENST00000530563 KDM6AO15550 1401 aaPredicted RBP14.84□□□□□ -0.03
TM9SF1-210ENST00000530563 CHRNA5P30532 468 aa14.84□□□□□ -0.03
TM9SF1-210ENST00000530563 CDCA8Q53HL2 280 aa14.84□□□□□ -0.03
TM9SF1-210ENST00000530563 DALRD3Q5D0E6 543 aaKnown RBP14.84□□□□□ -0.03
TM9SF1-210ENST00000530563 RNF181Q9P0P0 153 aa14.84□□□□□ -0.03
TM9SF1-210ENST00000530563 KDM2BQ8NHM5 1336 aa14.84□□□□□ -0.03
TM9SF1-210ENST00000530563 TM4SF1P30408 202 aa14.83□□□□□ -0.04
TM9SF1-210ENST00000530563 PRELPP51888 382 aa14.83□□□□□ -0.04
TM9SF1-210ENST00000530563 C16orf71Q8IYS4 520 aaPredicted RBP14.83□□□□□ -0.04
TM9SF1-210ENST00000530563 USP42Q9H9J4 1324 aaKnown RBP14.83□□□□□ -0.04
TM9SF1-210ENST00000530563 SBF1O95248 1867 aa14.82□□□□□ -0.04
TM9SF1-210ENST00000530563 ADAMTS7Q9UKP4 1686 aa14.82□□□□□ -0.04
TM9SF1-210ENST00000530563 CRKLP46109 303 aaKnown RBP14.82□□□□□ -0.04
TM9SF1-210ENST00000530563 POLRMTO00411 1230 aaKnown RBP14.81□□□□□ -0.04
TM9SF1-210ENST00000530563 CAPN15O75808 1086 aa14.81□□□□□ -0.04
TM9SF1-210ENST00000530563 INTS5Q6P9B9 1019 aaKnown RBP14.81□□□□□ -0.04
TM9SF1-210ENST00000530563 TNS4Q8IZW8 715 aa14.81□□□□□ -0.04
TM9SF1-210ENST00000530563 PTCD1O75127 700 aaKnown RBP14.8□□□□□ -0.04
TM9SF1-210ENST00000530563 HSP90AB1P08238 724 aaKnown RBP14.8□□□□□ -0.04
TM9SF1-210ENST00000530563 SMC1BQ8NDV3 1235 aa14.8□□□□□ -0.04
TM9SF1-210ENST00000530563 TNRC6CQ9HCJ0 1690 aaKnown RBP14.8□□□□□ -0.04
TM9SF1-210ENST00000530563 CABP4P57796 275 aa14.79□□□□□ -0.04
TM9SF1-210ENST00000530563 ZC3H4Q9UPT8 1303 aaKnown RBP14.78□□□□□ -0.04
TM9SF1-210ENST00000530563 RASSF7Q02833 373 aa14.78□□□□□ -0.04
TM9SF1-210ENST00000530563 PLEKHO1Q53GL0 409 aaPredicted RBP14.78□□□□□ -0.04
TM9SF1-210ENST00000530563 ZNF530Q6P9A1 599 aaPredicted RBP14.78□□□□□ -0.04
TM9SF1-210ENST00000530563 NFATC2IPQ8NCF5 419 aa14.78□□□□□ -0.04
TM9SF1-210ENST00000530563 TJP1Q07157 1748 aa14.78□□□□□ -0.04
TM9SF1-210ENST00000530563 AMOTQ4VCS5 1084 aa14.77□□□□□ -0.05
TM9SF1-210ENST00000530563 GLTPD2A6NH11 291 aa14.76□□□□□ -0.05
TM9SF1-210ENST00000530563 POTECB2RU33 542 aa14.76□□□□□ -0.05
TM9SF1-210ENST00000530563 TNNT2P45379 298 aaPredicted RBP14.76□□□□□ -0.05
TM9SF1-210ENST00000530563 MTHFSP49914 203 aa14.76□□□□□ -0.05
TM9SF1-210ENST00000530563 AEBP1Q8IUX7 1158 aa14.76□□□□□ -0.05
TM9SF1-210ENST00000530563 HSPA1AP0DMV8 641 aaKnown RBP14.75□□□□□ -0.05
TM9SF1-210ENST00000530563 HSPA1BP0DMV9 641 aaKnown RBP14.75□□□□□ -0.05
TM9SF1-210ENST00000530563 VEGFAP15692 232 aaPredicted RBP14.75□□□□□ -0.05
TM9SF1-210ENST00000530563 LMNB1P20700 586 aa14.75□□□□□ -0.05
TM9SF1-210ENST00000530563 USPL1Q5W0Q7 1092 aa14.75□□□□□ -0.05
TM9SF1-210ENST00000530563 NFIXQ14938 502 aa14.74□□□□□ -0.05
TM9SF1-210ENST00000530563 BCL2L12Q9HB09 334 aa14.74□□□□□ -0.05
TM9SF1-210ENST00000530563 NRXN2Q9P2S2 1712 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms