RNA–Protein interactions for RNA: ENST00000530521.1

USP35-205, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 2

Gene USP35, Length 598 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-205ENST00000530521 PKD1L3Q7Z443 1732 aa12.05□□□□□ -0.48
USP35-205ENST00000530521 KIAA1551Q9HCM1 1747 aa12.05□□□□□ -0.48
USP35-205ENST00000530521 FLT4P35916 1363 aa12.05□□□□□ -0.48
USP35-205ENST00000530521 TMF1P82094 1093 aa12.04□□□□□ -0.48
USP35-205ENST00000530521 SLC4A9Q96Q91 983 aa12.04□□□□□ -0.48
USP35-205ENST00000530521 KIF13BQ9NQT8 1826 aa12.03□□□□□ -0.48
USP35-205ENST00000530521 DPEP1P16444 411 aa12.03□□□□□ -0.48
USP35-205ENST00000530521 TRAPPC3LQ5T215 181 aa12.03□□□□□ -0.48
USP35-205ENST00000530521 ARHGEF1Q92888 912 aaKnown RBP12.03□□□□□ -0.48
USP35-205ENST00000530521 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
USP35-205ENST00000530521 MYH14Q7Z406 1995 aaKnown RBP12.02□□□□□ -0.49
USP35-205ENST00000530521 TOMM70O94826 608 aa12.02□□□□□ -0.49
USP35-205ENST00000530521 PHKG2P15735 406 aa12.02□□□□□ -0.49
USP35-205ENST00000530521 HMGB2P26583 209 aaKnown RBP12.02□□□□□ -0.49
USP35-205ENST00000530521 TNNT2P45379 298 aaPredicted RBP12.02□□□□□ -0.49
USP35-205ENST00000530521 APLP1P51693 650 aa12.02□□□□□ -0.49
USP35-205ENST00000530521 PXDNLA1KZ92 1463 aa12.02□□□□□ -0.49
USP35-205ENST00000530521 CICQ96RK0 1608 aaPredicted RBP12.01□□□□□ -0.49
USP35-205ENST00000530521 FCHSD2O94868 740 aa12.01□□□□□ -0.49
USP35-205ENST00000530521 KCNA3P22001 575 aa12.01□□□□□ -0.49
USP35-205ENST00000530521 IFNL2Q8IZJ0 200 aa12.01□□□□□ -0.49
USP35-205ENST00000530521 RTCBQ9Y3I0 505 aaKnown RBP12.01□□□□□ -0.49
USP35-205ENST00000530521 ZNF316A6NFI3 1004 aaPredicted RBP12□□□□□ -0.49
USP35-205ENST00000530521 SLC24A1O60721 1099 aa12□□□□□ -0.49
USP35-205ENST00000530521 TGFB2P61812 414 aa12□□□□□ -0.49
USP35-205ENST00000530521 NLGN1Q8N2Q7 840 aa12□□□□□ -0.49
USP35-205ENST00000530521 POLKQ9UBT6 870 aa12□□□□□ -0.49
USP35-205ENST00000530521 WASHC2AQ641Q2 1341 aa12□□□□□ -0.49
USP35-205ENST00000530521 BRCA1P38398 1863 aaKnown RBP12□□□□□ -0.49
USP35-205ENST00000530521 GYS1P13807 737 aa11.99□□□□□ -0.49
USP35-205ENST00000530521 C9orf131Q5VYM1 1079 aa11.99□□□□□ -0.49
USP35-205ENST00000530521 NSD3Q9BZ95 1437 aa11.99□□□□□ -0.49
USP35-205ENST00000530521 SBF1O95248 1867 aa11.98□□□□□ -0.49
USP35-205ENST00000530521 CAPN15O75808 1086 aa11.98□□□□□ -0.49
USP35-205ENST00000530521 RFC4P35249 363 aa11.98□□□□□ -0.49
USP35-205ENST00000530521 EIF4A2Q14240 407 aaKnown RBP11.98□□□□□ -0.49
USP35-205ENST00000530521 COL13A1Q5TAT6 717 aaPredicted RBP11.98□□□□□ -0.49
USP35-205ENST00000530521 POLR3GLQ9BT43 218 aa11.98□□□□□ -0.49
USP35-205ENST00000530521 RRAGCQ9HB90 399 aa11.98□□□□□ -0.49
USP35-205ENST00000530521 SRP68Q9UHB9 627 aaKnown RBP11.98□□□□□ -0.49
USP35-205ENST00000530521 PARP3Q9Y6F1 533 aa11.98□□□□□ -0.49
USP35-205ENST00000530521 WDR90Q96KV7 1748 aa11.97□□□□□ -0.49
USP35-205ENST00000530521 KIF24Q5T7B8 1368 aa11.97□□□□□ -0.49
USP35-205ENST00000530521 PTCD1O75127 700 aaKnown RBP11.97□□□□□ -0.49
USP35-205ENST00000530521 RPS6KA4O75676 772 aa11.97□□□□□ -0.49
USP35-205ENST00000530521 CCDC87Q9NVE4 849 aa11.97□□□□□ -0.49
USP35-205ENST00000530521 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.97□□□□□ -0.49
USP35-205ENST00000530521 C4AP0C0L4 1744 aa11.97□□□□□ -0.49
USP35-205ENST00000530521 PCNTO95613 3336 aa11.96□□□□□ -0.49
USP35-205ENST00000530521 NCAPD2Q15021 1401 aa11.96□□□□□ -0.49
USP35-205ENST00000530521 CCDC88AQ3V6T2 1871 aa11.96□□□□□ -0.49
USP35-205ENST00000530521 ARFGEF1Q9Y6D6 1849 aa11.96□□□□□ -0.49
USP35-205ENST00000530521 CHRNA5P30532 468 aa11.96□□□□□ -0.49
USP35-205ENST00000530521 COL5A3P25940 1745 aaPredicted RBP11.96□□□□□ -0.49
USP35-205ENST00000530521 ANKRD26Q9UPS8 1709 aa11.95□□□□□ -0.5
USP35-205ENST00000530521 EIF4G2P78344 907 aaKnown RBP eCLIP11.95□□□□□ -0.5
USP35-205ENST00000530521 FKBP8Q14318 412 aa11.95□□□□□ -0.5
USP35-205ENST00000530521 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
USP35-205ENST00000530521 C16orf71Q8IYS4 520 aaPredicted RBP11.95□□□□□ -0.5
USP35-205ENST00000530521 PIM2Q9P1W9 311 aa11.95□□□□□ -0.5
USP35-205ENST00000530521 KCPQ6ZWJ8 1503 aa11.95□□□□□ -0.5
USP35-205ENST00000530521 C10orf71Q711Q0 1435 aa11.94□□□□□ -0.5
USP35-205ENST00000530521 KDRP35968 1356 aa11.94□□□□□ -0.5
USP35-205ENST00000530521 ERVV-2B6SEH9 535 aa11.94□□□□□ -0.5
USP35-205ENST00000530521 CABP4P57796 275 aa11.94□□□□□ -0.5
USP35-205ENST00000530521 CDCA8Q53HL2 280 aa11.94□□□□□ -0.5
USP35-205ENST00000530521 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
USP35-205ENST00000530521 RBM46Q8TBY0 533 aaKnown RBP11.94□□□□□ -0.5
USP35-205ENST00000530521 RNF181Q9P0P0 153 aa11.94□□□□□ -0.5
USP35-205ENST00000530521 CRKLP46109 303 aaKnown RBP11.93□□□□□ -0.5
USP35-205ENST00000530521 DDR1Q08345 913 aa11.93□□□□□ -0.5
USP35-205ENST00000530521 DALRD3Q5D0E6 543 aaKnown RBP11.93□□□□□ -0.5
USP35-205ENST00000530521 KLRG1Q96E93 195 aa11.93□□□□□ -0.5
USP35-205ENST00000530521 CNTNAP4Q9C0A0 1308 aa11.92□□□□□ -0.5
USP35-205ENST00000530521 MTHFSP49914 203 aa11.92□□□□□ -0.5
USP35-205ENST00000530521 PLEKHO1Q53GL0 409 aaPredicted RBP11.92□□□□□ -0.5
USP35-205ENST00000530521 ZNF530Q6P9A1 599 aaPredicted RBP11.92□□□□□ -0.5
USP35-205ENST00000530521 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
USP35-205ENST00000530521 DCAF5Q96JK2 942 aa11.92□□□□□ -0.5
USP35-205ENST00000530521 ADRA2BP18089 450 aa11.91□□□□□ -0.5
USP35-205ENST00000530521 RASSF7Q02833 373 aa11.91□□□□□ -0.5
USP35-205ENST00000530521 KDM6AO15550 1401 aaPredicted RBP11.91□□□□□ -0.5
USP35-205ENST00000530521 ZNF831Q5JPB2 1677 aa11.91□□□□□ -0.5
USP35-205ENST00000530521 AFDNP55196 1824 aaKnown RBP11.9□□□□□ -0.5
USP35-205ENST00000530521 TM4SF1P30408 202 aa11.9□□□□□ -0.5
USP35-205ENST00000530521 PRELPP51888 382 aa11.9□□□□□ -0.5
USP35-205ENST00000530521 INTS5Q6P9B9 1019 aaKnown RBP11.9□□□□□ -0.5
USP35-205ENST00000530521 KDM2BQ8NHM5 1336 aa11.89□□□□□ -0.51
USP35-205ENST00000530521 POLRMTO00411 1230 aaKnown RBP11.89□□□□□ -0.51
USP35-205ENST00000530521 FSTL1Q12841 308 aa11.89□□□□□ -0.51
USP35-205ENST00000530521 USPL1Q5W0Q7 1092 aa11.89□□□□□ -0.51
USP35-205ENST00000530521 DIEXFQ68CQ4 756 aaKnown RBP11.89□□□□□ -0.51
USP35-205ENST00000530521 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
USP35-205ENST00000530521 USP42Q9H9J4 1324 aaKnown RBP11.88□□□□□ -0.51
USP35-205ENST00000530521 HSP90AB1P08238 724 aaKnown RBP11.88□□□□□ -0.51
USP35-205ENST00000530521 SLC39A6Q13433 755 aa11.88□□□□□ -0.51
USP35-205ENST00000530521 DNAJC10Q8IXB1 793 aa11.88□□□□□ -0.51
USP35-205ENST00000530521 LGR6Q9HBX8 967 aa11.88□□□□□ -0.51
USP35-205ENST00000530521 TJP1Q07157 1748 aa11.88□□□□□ -0.51
USP35-205ENST00000530521 VIRMAQ69YN4 1812 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms