RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 COL25A1Q9BXS0 654 aaPredicted RBP13.88□□□□□ -0.19
CCDC90B-217ENST00000530253 CCDC18Q5T9S5 1454 aa13.87□□□□□ -0.19
CCDC90B-217ENST00000530253 TSPOAP1O95153 1857 aa13.87□□□□□ -0.19
CCDC90B-217ENST00000530253 KRT76Q01546 638 aa13.87□□□□□ -0.19
CCDC90B-217ENST00000530253 SEPT12Q8IYM1 358 aa13.87□□□□□ -0.19
CCDC90B-217ENST00000530253 ZNF784Q8NCA9 323 aaPredicted RBP13.87□□□□□ -0.19
CCDC90B-217ENST00000530253 SV2AQ7L0J3 742 aa13.86□□□□□ -0.19
CCDC90B-217ENST00000530253 MAGI3Q5TCQ9 1506 aa13.85□□□□□ -0.19
CCDC90B-217ENST00000530253 RNF217Q8TC41 542 aa13.85□□□□□ -0.19
CCDC90B-217ENST00000530253 CFAP43Q8NDM7 1665 aa13.85□□□□□ -0.19
CCDC90B-217ENST00000530253 RFC5P40937 340 aa13.84□□□□□ -0.19
CCDC90B-217ENST00000530253 RAB15P59190 212 aa13.84□□□□□ -0.19
CCDC90B-217ENST00000530253 EPS8L1Q8TE68 723 aa13.84□□□□□ -0.19
CCDC90B-217ENST00000530253 HMX1Q9NP08 348 aaPredicted RBP13.84□□□□□ -0.19
CCDC90B-217ENST00000530253 TMPRSS4Q9NRS4 437 aa13.84□□□□□ -0.19
CCDC90B-217ENST00000530253 GLI2P10070 1586 aa13.83□□□□□ -0.19
CCDC90B-217ENST00000530253 CDC14CA4D256 554 aa13.83□□□□□ -0.2
CCDC90B-217ENST00000530253 ESPNB1AK53 854 aa13.83□□□□□ -0.2
CCDC90B-217ENST00000530253 BCANQ96GW7 911 aa13.83□□□□□ -0.2
CCDC90B-217ENST00000530253 ZNF395Q9H8N7 513 aaPredicted RBP13.83□□□□□ -0.2
CCDC90B-217ENST00000530253 GOPCQ9HD26 462 aa13.83□□□□□ -0.2
CCDC90B-217ENST00000530253 ERVH48-1M5A8F1 160 aa13.82□□□□□ -0.2
CCDC90B-217ENST00000530253 CCDC125Q86Z20 511 aa13.82□□□□□ -0.2
CCDC90B-217ENST00000530253 TIAM1Q13009 1591 aa13.82□□□□□ -0.2
CCDC90B-217ENST00000530253 PTGIRP43119 386 aa13.81□□□□□ -0.2
CCDC90B-217ENST00000530253 TMEM259Q4ZIN3 620 aa13.81□□□□□ -0.2
CCDC90B-217ENST00000530253 VWA5B2Q8N398 1253 aa13.81□□□□□ -0.2
CCDC90B-217ENST00000530253 SVOPQ8N4V2 548 aa13.81□□□□□ -0.2
CCDC90B-217ENST00000530253 TROQ12816 1431 aaPredicted RBP13.81□□□□□ -0.2
CCDC90B-217ENST00000530253 MAP3K1Q13233 1512 aa13.8□□□□□ -0.2
CCDC90B-217ENST00000530253 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
CCDC90B-217ENST00000530253 LILRA1O75019 489 aa13.79□□□□□ -0.2
CCDC90B-217ENST00000530253 ADAMTS8Q9UP79 889 aa13.79□□□□□ -0.2
CCDC90B-217ENST00000530253 SLURP2P0DP57 97 aa13.78□□□□□ -0.2
CCDC90B-217ENST00000530253 LYSMD3Q7Z3D4 306 aa13.78□□□□□ -0.2
CCDC90B-217ENST00000530253 KIF14Q15058 1648 aa13.78□□□□□ -0.2
CCDC90B-217ENST00000530253 ABCA9Q8IUA7 1624 aa13.78□□□□□ -0.2
CCDC90B-217ENST00000530253 MAP3K4Q9Y6R4 1608 aa13.78□□□□□ -0.2
CCDC90B-217ENST00000530253 RNFT1Q5M7Z0 435 aa13.77□□□□□ -0.21
CCDC90B-217ENST00000530253 TMEM151AQ8N4L1 468 aa13.77□□□□□ -0.21
CCDC90B-217ENST00000530253 ZNF592Q92610 1267 aa13.77□□□□□ -0.21
CCDC90B-217ENST00000530253 TTC37Q6PGP7 1564 aa13.76□□□□□ -0.21
CCDC90B-217ENST00000530253 EHBP1L1Q8N3D4 1523 aa13.76□□□□□ -0.21
CCDC90B-217ENST00000530253 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.76□□□□□ -0.21
CCDC90B-217ENST00000530253 PLEKHD1A6NEE1 506 aa13.76□□□□□ -0.21
CCDC90B-217ENST00000530253 FOXD4L5Q5VV16 416 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-217ENST00000530253 ZNF385CQ66K41 422 aaPredicted RBP13.76□□□□□ -0.21
CCDC90B-217ENST00000530253 PPRC1Q5VV67 1664 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-217ENST00000530253 SENP3-EIF4A1A0A087X0R7 540 aa13.75□□□□□ -0.21
CCDC90B-217ENST00000530253 ZBBXA8MT70 800 aa13.75□□□□□ -0.21
CCDC90B-217ENST00000530253 ADD1P35611 737 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-217ENST00000530253 LRRC9Q6ZRR7 1453 aa13.74□□□□□ -0.21
CCDC90B-217ENST00000530253 RASSF7Q02833 373 aa13.73□□□□□ -0.21
CCDC90B-217ENST00000530253 GMCL1Q96IK5 515 aa13.73□□□□□ -0.21
CCDC90B-217ENST00000530253 TRIM34Q9BYJ4 488 aa13.73□□□□□ -0.21
CCDC90B-217ENST00000530253 CYLDQ9NQC7 956 aa13.73□□□□□ -0.21
CCDC90B-217ENST00000530253 CDK11AQ9UQ88 783 aaPredicted RBP13.73□□□□□ -0.21
CCDC90B-217ENST00000530253 KDM6BO15054 1643 aa13.72□□□□□ -0.21
CCDC90B-217ENST00000530253 GDF11O95390 407 aa13.72□□□□□ -0.21
CCDC90B-217ENST00000530253 GSK3AP49840 483 aa13.72□□□□□ -0.21
CCDC90B-217ENST00000530253 RNF144AP50876 292 aaPredicted RBP13.72□□□□□ -0.21
CCDC90B-217ENST00000530253 RNF20Q5VTR2 975 aa13.72□□□□□ -0.21
CCDC90B-217ENST00000530253 PCDHB9Q9Y5E1 797 aa13.72□□□□□ -0.21
CCDC90B-217ENST00000530253 ATP5J2-PTCD1G3V325 749 aa13.71□□□□□ -0.21
CCDC90B-217ENST00000530253 GPC1P35052 558 aa13.71□□□□□ -0.21
CCDC90B-217ENST00000530253 MCCD1P59942 119 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-217ENST00000530253 KDF1Q8NAX2 398 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-217ENST00000530253 MTUS2Q5JR59 1369 aa13.71□□□□□ -0.22
CCDC90B-217ENST00000530253 CD109Q6YHK3 1445 aa13.7□□□□□ -0.22
CCDC90B-217ENST00000530253 SRSF11Q05519 484 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-217ENST00000530253 KANK4Q5T7N3 995 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-217ENST00000530253 KCTD17Q8N5Z5 321 aa13.69□□□□□ -0.22
CCDC90B-217ENST00000530253 MAP3K10Q02779 954 aa13.68□□□□□ -0.22
CCDC90B-217ENST00000530253 FOXR1Q6PIV2 292 aa13.68□□□□□ -0.22
CCDC90B-217ENST00000530253 ZNF330Q9Y3S2 320 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-217ENST00000530253 ARAP3Q8WWN8 1544 aa13.68□□□□□ -0.22
CCDC90B-217ENST00000530253 MARSP56192 900 aaKnown RBP13.67□□□□□ -0.22
CCDC90B-217ENST00000530253 SUPT6HQ7KZ85 1726 aaKnown RBP13.67□□□□□ -0.22
CCDC90B-217ENST00000530253 NCOA2Q15596 1464 aa13.67□□□□□ -0.22
CCDC90B-217ENST00000530253 PREX2Q70Z35 1606 aa13.66□□□□□ -0.22
CCDC90B-217ENST00000530253 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
CCDC90B-217ENST00000530253 ADAMTS2O95450 1211 aa13.66□□□□□ -0.22
CCDC90B-217ENST00000530253 PRICKLE2Q7Z3G6 844 aa13.66□□□□□ -0.22
CCDC90B-217ENST00000530253 SCARF2Q96GP6 870 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-217ENST00000530253 MYO5CQ9NQX4 1742 aa13.66□□□□□ -0.22
CCDC90B-217ENST00000530253 PLCH2O75038 1416 aa13.65□□□□□ -0.22
CCDC90B-217ENST00000530253 CDC42BPAQ5VT25 1732 aa13.65□□□□□ -0.22
CCDC90B-217ENST00000530253 GIGYF1O75420 1035 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-217ENST00000530253 FBXO45P0C2W1 286 aa13.65□□□□□ -0.22
CCDC90B-217ENST00000530253 CC2D2BQ6DHV5 1058 aa13.65□□□□□ -0.22
CCDC90B-217ENST00000530253 KANK3Q6NY19 840 aa13.65□□□□□ -0.22
CCDC90B-217ENST00000530253 COL17A1Q9UMD9 1497 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-217ENST00000530253 GPATCH8Q9UKJ3 1502 aaKnown RBP13.64□□□□□ -0.23
CCDC90B-217ENST00000530253 TEX14Q8IWB6 1497 aa13.64□□□□□ -0.23
CCDC90B-217ENST00000530253 WHAMMQ8TF30 809 aa13.64□□□□□ -0.23
CCDC90B-217ENST00000530253 ENAMQ9NRM1 1142 aa13.64□□□□□ -0.23
CCDC90B-217ENST00000530253 MEN1O00255 615 aa13.63□□□□□ -0.23
CCDC90B-217ENST00000530253 ERVK-9P63128 1117 aa13.63□□□□□ -0.23
CCDC90B-217ENST00000530253 CYP2U1Q7Z449 544 aa13.63□□□□□ -0.23
CCDC90B-217ENST00000530253 TRIM22Q8IYM9 498 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms