RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 RRAGCQ9HB90 399 aa16.41■□□□□ 0.22
AMBRA1-207ENST00000529553 UBR3Q6ZT12 1888 aa16.41■□□□□ 0.22
AMBRA1-207ENST00000529553 KIF24Q5T7B8 1368 aa16.4■□□□□ 0.22
AMBRA1-207ENST00000529553 TOGARAM1Q9Y4F4 1720 aa16.4■□□□□ 0.22
AMBRA1-207ENST00000529553 ADRA2BP18089 450 aa16.4■□□□□ 0.22
AMBRA1-207ENST00000529553 ITPK1Q13572 414 aa16.4■□□□□ 0.22
AMBRA1-207ENST00000529553 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
AMBRA1-207ENST00000529553 SIN3AQ96ST3 1273 aa16.4■□□□□ 0.22
AMBRA1-207ENST00000529553 PIM2Q9P1W9 311 aa16.4■□□□□ 0.22
AMBRA1-207ENST00000529553 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
AMBRA1-207ENST00000529553 RTCBQ9Y3I0 505 aaKnown RBP16.4■□□□□ 0.22
AMBRA1-207ENST00000529553 FYB1O15117 783 aa16.39■□□□□ 0.21
AMBRA1-207ENST00000529553 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
AMBRA1-207ENST00000529553 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.21
AMBRA1-207ENST00000529553 TMOD3Q9NYL9 352 aa16.39■□□□□ 0.21
AMBRA1-207ENST00000529553 PCNTO95613 3336 aa16.38■□□□□ 0.21
AMBRA1-207ENST00000529553 DCAF5Q96JK2 942 aa16.38■□□□□ 0.21
AMBRA1-207ENST00000529553 ASAP1Q9ULH1 1129 aa16.38■□□□□ 0.21
AMBRA1-207ENST00000529553 PARP3Q9Y6F1 533 aa16.38■□□□□ 0.21
AMBRA1-207ENST00000529553 ARHGEF1Q92888 912 aaKnown RBP16.37■□□□□ 0.21
AMBRA1-207ENST00000529553 KIF13BQ9NQT8 1826 aa16.37■□□□□ 0.21
AMBRA1-207ENST00000529553 RGPD2P0DJD1 1756 aa16.36■□□□□ 0.21
AMBRA1-207ENST00000529553 HSPA1AP0DMV8 641 aaKnown RBP16.36■□□□□ 0.21
AMBRA1-207ENST00000529553 HSPA1BP0DMV9 641 aaKnown RBP16.36■□□□□ 0.21
AMBRA1-207ENST00000529553 GYS1P13807 737 aa16.36■□□□□ 0.21
AMBRA1-207ENST00000529553 NEUROD1Q13562 356 aa16.36■□□□□ 0.21
AMBRA1-207ENST00000529553 DALRD3Q5D0E6 543 aaKnown RBP16.36■□□□□ 0.21
AMBRA1-207ENST00000529553 ATG3Q9NT62 314 aa16.36■□□□□ 0.21
AMBRA1-207ENST00000529553 RNF181Q9P0P0 153 aa16.36■□□□□ 0.21
AMBRA1-207ENST00000529553 ZC3H4Q9UPT8 1303 aaKnown RBP16.36■□□□□ 0.21
AMBRA1-207ENST00000529553 FLT4P35916 1363 aa16.36■□□□□ 0.21
AMBRA1-207ENST00000529553 RFC4P35249 363 aa16.35■□□□□ 0.21
AMBRA1-207ENST00000529553 KCPQ6ZWJ8 1503 aa16.35■□□□□ 0.21
AMBRA1-207ENST00000529553 KIAA1551Q9HCM1 1747 aa16.34■□□□□ 0.21
AMBRA1-207ENST00000529553 GGNBP2Q9H3C7 697 aa16.34■□□□□ 0.21
AMBRA1-207ENST00000529553 MAP2P11137 1827 aaKnown RBP16.33■□□□□ 0.21
AMBRA1-207ENST00000529553 RPS6KA4O75676 772 aa16.33■□□□□ 0.2
AMBRA1-207ENST00000529553 VEGFAP15692 232 aaPredicted RBP16.33■□□□□ 0.2
AMBRA1-207ENST00000529553 IFNL2Q8IZJ0 200 aa16.33■□□□□ 0.2
AMBRA1-207ENST00000529553 TESK2Q96S53 571 aa16.33■□□□□ 0.2
AMBRA1-207ENST00000529553 N4BP2Q86UW6 1770 aaPredicted RBP16.31■□□□□ 0.2
AMBRA1-207ENST00000529553 NCAPD2Q15021 1401 aa16.31■□□□□ 0.2
AMBRA1-207ENST00000529553 TONSLQ96HA7 1378 aa16.31■□□□□ 0.2
AMBRA1-207ENST00000529553 SLC34A2O95436 690 aa16.31■□□□□ 0.2
AMBRA1-207ENST00000529553 PHKG2P15735 406 aa16.31■□□□□ 0.2
AMBRA1-207ENST00000529553 ITGB4P16144 1822 aa16.31■□□□□ 0.2
AMBRA1-207ENST00000529553 CNTNAP4Q9C0A0 1308 aa16.3■□□□□ 0.2
AMBRA1-207ENST00000529553 GLTPD2A6NH11 291 aa16.3■□□□□ 0.2
AMBRA1-207ENST00000529553 ERVV-2B6SEH9 535 aa16.29■□□□□ 0.2
AMBRA1-207ENST00000529553 SLC4A9Q96Q91 983 aa16.29■□□□□ 0.2
AMBRA1-207ENST00000529553 KDRP35968 1356 aa16.28■□□□□ 0.2
AMBRA1-207ENST00000529553 C4AP0C0L4 1744 aa16.28■□□□□ 0.2
AMBRA1-207ENST00000529553 ST20-MTHFSA0A0A6YYL1 179 aa16.27■□□□□ 0.2
AMBRA1-207ENST00000529553 LMNB1P20700 586 aa16.27■□□□□ 0.2
AMBRA1-207ENST00000529553 RBM42Q9BTD8 480 aaKnown RBP16.27■□□□□ 0.2
AMBRA1-207ENST00000529553 PKD1L3Q7Z443 1732 aa16.27■□□□□ 0.19
AMBRA1-207ENST00000529553 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
AMBRA1-207ENST00000529553 EYA1Q99502 592 aa16.26■□□□□ 0.19
AMBRA1-207ENST00000529553 ARFGEF1Q9Y6D6 1849 aa16.26■□□□□ 0.19
AMBRA1-207ENST00000529553 TNRC6CQ9HCJ0 1690 aaKnown RBP16.25■□□□□ 0.19
AMBRA1-207ENST00000529553 EMILIN1Q9Y6C2 1016 aa16.25■□□□□ 0.19
AMBRA1-207ENST00000529553 KDM6AO15550 1401 aaPredicted RBP16.25■□□□□ 0.19
AMBRA1-207ENST00000529553 BRCA1P38398 1863 aaKnown RBP16.25■□□□□ 0.19
AMBRA1-207ENST00000529553 HSP90AB1P08238 724 aaKnown RBP16.24■□□□□ 0.19
AMBRA1-207ENST00000529553 TM4SF1P30408 202 aa16.24■□□□□ 0.19
AMBRA1-207ENST00000529553 CHRNA5P30532 468 aa16.24■□□□□ 0.19
AMBRA1-207ENST00000529553 PRDM10Q9NQV6 1147 aa16.24■□□□□ 0.19
AMBRA1-207ENST00000529553 DDR1Q08345 913 aa16.23■□□□□ 0.19
AMBRA1-207ENST00000529553 FKBP8Q14318 412 aa16.23■□□□□ 0.19
AMBRA1-207ENST00000529553 CREBZFQ9NS37 354 aa16.23■□□□□ 0.19
AMBRA1-207ENST00000529553 ZNF831Q5JPB2 1677 aa16.23■□□□□ 0.19
AMBRA1-207ENST00000529553 USP42Q9H9J4 1324 aaKnown RBP16.22■□□□□ 0.19
AMBRA1-207ENST00000529553 DPY19L2Q6NUT2 758 aa16.22■□□□□ 0.19
AMBRA1-207ENST00000529553 POLRMTO00411 1230 aaKnown RBP16.21■□□□□ 0.19
AMBRA1-207ENST00000529553 POTECB2RU33 542 aa16.2■□□□□ 0.18
AMBRA1-207ENST00000529553 PPM1GO15355 546 aaPredicted RBP16.2■□□□□ 0.18
AMBRA1-207ENST00000529553 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
AMBRA1-207ENST00000529553 PCDH10Q9P2E7 1040 aa16.2■□□□□ 0.18
AMBRA1-207ENST00000529553 SRP68Q9UHB9 627 aaKnown RBP16.2■□□□□ 0.18
AMBRA1-207ENST00000529553 RASSF7Q02833 373 aa16.19■□□□□ 0.18
AMBRA1-207ENST00000529553 CDCA8Q53HL2 280 aa16.19■□□□□ 0.18
AMBRA1-207ENST00000529553 CABP4P57796 275 aa16.18■□□□□ 0.18
AMBRA1-207ENST00000529553 TTLL6Q8N841 843 aa16.18■□□□□ 0.18
AMBRA1-207ENST00000529553 SBF1O95248 1867 aa16.17■□□□□ 0.18
AMBRA1-207ENST00000529553 FOXN1O15353 648 aa16.17■□□□□ 0.18
AMBRA1-207ENST00000529553 ZPR1O75312 459 aa16.17■□□□□ 0.18
AMBRA1-207ENST00000529553 CTCFP49711 727 aaPredicted RBP16.17■□□□□ 0.18
AMBRA1-207ENST00000529553 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
AMBRA1-207ENST00000529553 CHADLQ6NUI6 762 aa16.17■□□□□ 0.18
AMBRA1-207ENST00000529553 CARD14Q9BXL6 1004 aa16.17■□□□□ 0.18
AMBRA1-207ENST00000529553 PTCD1O75127 700 aaKnown RBP16.16■□□□□ 0.18
AMBRA1-207ENST00000529553 AMOTQ4VCS5 1084 aa16.16■□□□□ 0.18
AMBRA1-207ENST00000529553 MKRN1Q9UHC7 482 aaKnown RBP16.16■□□□□ 0.18
AMBRA1-207ENST00000529553 INTS5Q6P9B9 1019 aaKnown RBP16.15■□□□□ 0.18
AMBRA1-207ENST00000529553 POLKQ9UBT6 870 aa16.15■□□□□ 0.18
AMBRA1-207ENST00000529553 AIDAQ96BJ3 306 aa16.14■□□□□ 0.17
AMBRA1-207ENST00000529553 COL5A3P25940 1745 aaPredicted RBP16.14■□□□□ 0.17
AMBRA1-207ENST00000529553 CNTNAP1P78357 1384 aa16.13■□□□□ 0.17
AMBRA1-207ENST00000529553 H0YIN7 160 aa16.13■□□□□ 0.17
AMBRA1-207ENST00000529553 NFKBIEO00221 500 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms