RNA–Protein interactions for RNA: ENST00000529349.1

USP50-201, Transcript of ubiquitin specific peptidase 50, humanhuman

TSL 3

Gene USP50, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP50-201ENST00000529349 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
USP50-201ENST00000529349 HRH3Q9Y5N1 445 aa13.05□□□□□ -0.32
USP50-201ENST00000529349 POU4F2Q12837 409 aa13.04□□□□□ -0.32
USP50-201ENST00000529349 LYSMD3Q7Z3D4 306 aa13.04□□□□□ -0.32
USP50-201ENST00000529349 GRIP2Q9C0E4 1043 aa13.04□□□□□ -0.32
USP50-201ENST00000529349 ZNF358Q9NW07 568 aa13.04□□□□□ -0.32
USP50-201ENST00000529349 TLR1Q15399 786 aa13.03□□□□□ -0.32
USP50-201ENST00000529349 LARGE2Q8N3Y3 721 aa13.03□□□□□ -0.32
USP50-201ENST00000529349 SFI1A8K8P3 1242 aa13.02□□□□□ -0.33
USP50-201ENST00000529349 GPC1P35052 558 aa13.01□□□□□ -0.33
USP50-201ENST00000529349 VEGFBP49765 207 aa13.01□□□□□ -0.33
USP50-201ENST00000529349 ZSCAN10Q96SZ4 725 aaPredicted RBP13.01□□□□□ -0.33
USP50-201ENST00000529349 FHDC1Q9C0D6 1143 aaPredicted RBP13.01□□□□□ -0.33
USP50-201ENST00000529349 PHKA2P46019 1235 aa13□□□□□ -0.33
USP50-201ENST00000529349 SMTNP53814 917 aa13□□□□□ -0.33
USP50-201ENST00000529349 PTSQ03393 145 aa13□□□□□ -0.33
USP50-201ENST00000529349 PTK7Q13308 1070 aa13□□□□□ -0.33
USP50-201ENST00000529349 TMEM214Q6NUQ4 689 aaKnown RBP13□□□□□ -0.33
USP50-201ENST00000529349 LGR5O75473 907 aa12.99□□□□□ -0.33
USP50-201ENST00000529349 TNS4Q8IZW8 715 aa12.99□□□□□ -0.33
USP50-201ENST00000529349 ZNF775Q96BV0 537 aaPredicted RBP12.99□□□□□ -0.33
USP50-201ENST00000529349 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
USP50-201ENST00000529349 USP17L15C9J2P7 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L10C9JJH3 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L13C9JLJ4 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L12C9JPN9 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L11C9JVI0 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L21D6R901 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L18D6R9N7 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L22D6RA61 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L17D6RBQ6 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L19D6RCP7 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L20D6RJB6 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 DKK1O94907 266 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 SRPK2P78362 688 aaKnown RBP12.98□□□□□ -0.33
USP50-201ENST00000529349 USP17L24Q0WX57 530 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 DPYDQ12882 1025 aa12.98□□□□□ -0.33
USP50-201ENST00000529349 WASLO00401 505 aaPredicted RBP12.97□□□□□ -0.33
USP50-201ENST00000529349 BACH1O14867 736 aa12.97□□□□□ -0.33
USP50-201ENST00000529349 SLC4A9Q96Q91 983 aa12.97□□□□□ -0.33
USP50-201ENST00000529349 USP3Q9Y6I4 520 aa12.97□□□□□ -0.33
USP50-201ENST00000529349 A6NJY4 79 aa12.96□□□□□ -0.33
USP50-201ENST00000529349 TBCELQ5QJ74 424 aa12.96□□□□□ -0.33
USP50-201ENST00000529349 NBPF10Q6P3W6 841 aaKnown RBP12.96□□□□□ -0.33
USP50-201ENST00000529349 ANKMY2Q8IV38 441 aa12.96□□□□□ -0.33
USP50-201ENST00000529349 SIX5Q8N196 739 aa12.96□□□□□ -0.33
USP50-201ENST00000529349 NBPF15Q8N660 670 aa12.96□□□□□ -0.33
USP50-201ENST00000529349 TSEN2Q8NCE0 465 aaKnown RBP12.96□□□□□ -0.33
USP50-201ENST00000529349 GTF2E1P29083 439 aaPredicted RBP12.95□□□□□ -0.34
USP50-201ENST00000529349 FAM196BA6NMK8 535 aa12.94□□□□□ -0.34
USP50-201ENST00000529349 SEC13P55735 322 aa12.94□□□□□ -0.34
USP50-201ENST00000529349 GNASQ5JWF2 1037 aa12.94□□□□□ -0.34
USP50-201ENST00000529349 PPARGC1BQ86YN6 1023 aaKnown RBP12.94□□□□□ -0.34
USP50-201ENST00000529349 NXF1Q9UBU9 619 aaKnown RBP12.94□□□□□ -0.34
USP50-201ENST00000529349 SENP3-EIF4A1A0A087X0R7 540 aa12.93□□□□□ -0.34
USP50-201ENST00000529349 C4orf17Q53FE4 359 aa12.93□□□□□ -0.34
USP50-201ENST00000529349 TAS1R3Q7RTX0 852 aa12.93□□□□□ -0.34
USP50-201ENST00000529349 CCDC155Q8N6L0 562 aa12.93□□□□□ -0.34
USP50-201ENST00000529349 PBXIP1Q96AQ6 731 aa12.93□□□□□ -0.34
USP50-201ENST00000529349 NOVA2Q9UNW9 492 aaKnown RBP12.93□□□□□ -0.34
USP50-201ENST00000529349 SLC35F4A4IF30 521 aa12.92□□□□□ -0.34
USP50-201ENST00000529349 SPATA31C2B4DYI2 1134 aa12.92□□□□□ -0.34
USP50-201ENST00000529349 PPFIA3O75145 1194 aa12.92□□□□□ -0.34
USP50-201ENST00000529349 GAS2L2Q8NHY3 880 aa12.92□□□□□ -0.34
USP50-201ENST00000529349 ARXQ96QS3 562 aa12.92□□□□□ -0.34
USP50-201ENST00000529349 HINFPQ9BQA5 517 aa12.92□□□□□ -0.34
USP50-201ENST00000529349 TIMMDC1Q9NPL8 285 aa12.92□□□□□ -0.34
USP50-201ENST00000529349 CDK2AP1O14519 115 aa12.91□□□□□ -0.34
USP50-201ENST00000529349 TERTO14746 1132 aaKnown RBP12.91□□□□□ -0.34
USP50-201ENST00000529349 FAM200AQ8TCP9 573 aa12.91□□□□□ -0.34
USP50-201ENST00000529349 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
USP50-201ENST00000529349 MTFR1Q15390 333 aa12.9□□□□□ -0.34
USP50-201ENST00000529349 RHBDD1Q8TEB9 315 aa12.9□□□□□ -0.34
USP50-201ENST00000529349 GAS2L1Q99501 681 aaPredicted RBP12.9□□□□□ -0.34
USP50-201ENST00000529349 CABP1Q9NZU7 370 aa12.9□□□□□ -0.34
USP50-201ENST00000529349 SCHIP1Q9P0W5 487 aaPredicted RBP12.9□□□□□ -0.34
USP50-201ENST00000529349 IQSEC3Q9UPP2 1182 aaPredicted RBP12.9□□□□□ -0.34
USP50-201ENST00000529349 EPHA4P54764 986 aa12.89□□□□□ -0.35
USP50-201ENST00000529349 SLC9A9Q8IVB4 645 aa12.89□□□□□ -0.35
USP50-201ENST00000529349 PLA2G4AP47712 749 aa12.88□□□□□ -0.35
USP50-201ENST00000529349 AIDAQ96BJ3 306 aa12.88□□□□□ -0.35
USP50-201ENST00000529349 TSPAN10Q9H1Z9 355 aaPredicted RBP12.88□□□□□ -0.35
USP50-201ENST00000529349 ZMIZ1Q9ULJ6 1067 aa12.88□□□□□ -0.35
USP50-201ENST00000529349 FOXK2Q01167 660 aa12.87□□□□□ -0.35
USP50-201ENST00000529349 STK32AQ8WU08 396 aa12.87□□□□□ -0.35
USP50-201ENST00000529349 NIFKQ9BYG3 293 aaKnown RBP12.87□□□□□ -0.35
USP50-201ENST00000529349 ATG7O95352 703 aa12.86□□□□□ -0.35
USP50-201ENST00000529349 RIPOR1Q6ZS17 1223 aa12.86□□□□□ -0.35
USP50-201ENST00000529349 GPAMQ9HCL2 828 aa12.86□□□□□ -0.35
USP50-201ENST00000529349 CUEDC1Q9NWM3 386 aaPredicted RBP12.86□□□□□ -0.35
USP50-201ENST00000529349 M0R2N6 131 aa12.85□□□□□ -0.35
USP50-201ENST00000529349 WDR44Q5JSH3 913 aa12.85□□□□□ -0.35
USP50-201ENST00000529349 H3BM21 787 aa12.84□□□□□ -0.35
USP50-201ENST00000529349 ZNF295-AS1Q8N0V1 137 aa12.84□□□□□ -0.35
USP50-201ENST00000529349 ZDHHC1Q8WTX9 485 aa12.84□□□□□ -0.35
USP50-201ENST00000529349 CHMP7Q8WUX9 453 aaPredicted RBP12.84□□□□□ -0.35
USP50-201ENST00000529349 SCG3Q8WXD2 468 aaKnown RBP12.84□□□□□ -0.35
USP50-201ENST00000529349 DYRK1BQ9Y463 629 aa12.84□□□□□ -0.35
USP50-201ENST00000529349 ITGA6P23229 1130 aa12.83□□□□□ -0.36
USP50-201ENST00000529349 NFX1Q12986 1120 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms