RNA–Protein interactions for RNA: ENST00000529349.1

USP50-201, Transcript of ubiquitin specific peptidase 50, humanhuman

TSL 3

Gene USP50, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP50-201ENST00000529349 AEBP2Q6ZN18 517 aaPredicted RBP36.06■■■■□ 3.36
USP50-201ENST00000529349 CHIC1Q5VXU3 224 aa35.14■■■■□ 3.22
USP50-201ENST00000529349 PHF23Q9BUL5 403 aaPredicted RBP30.99■■■□□ 2.55
USP50-201ENST00000529349 SENP3Q9H4L4 574 aaPredicted RBP30.48■■■□□ 2.47
USP50-201ENST00000529349 PLPPR3Q6T4P5 718 aa28.51■■■□□ 2.15
USP50-201ENST00000529349 FOXD1Q16676 465 aa28.38■■■□□ 2.13
USP50-201ENST00000529349 PPP6R1Q9UPN7 881 aa27.39■■□□□ 1.98
USP50-201ENST00000529349 ADRA2BP18089 450 aa27.38■■□□□ 1.97
USP50-201ENST00000529349 PIAS4Q8N2W9 510 aaPredicted RBP26.76■■□□□ 1.87
USP50-201ENST00000529349 MSH5O43196 834 aa26.05■■□□□ 1.76
USP50-201ENST00000529349 PPP4R3CPQ6ZMV5 832 aa25.19■■□□□ 1.62
USP50-201ENST00000529349 SCAF1Q9H7N4 1312 aaKnown RBP24.88■■□□□ 1.57
USP50-201ENST00000529349 MAPK8IP2Q13387 824 aaPredicted RBP24.87■■□□□ 1.57
USP50-201ENST00000529349 KCNA4P22459 653 aa24.67■■□□□ 1.54
USP50-201ENST00000529349 NCBP3Q53F19 620 aaKnown RBP24.46■■□□□ 1.51
USP50-201ENST00000529349 CNKSR2Q8WXI2 1034 aa24.42■■□□□ 1.5
USP50-201ENST00000529349 DMRT2Q9Y5R5 561 aa24.35■■□□□ 1.49
USP50-201ENST00000529349 NPM3O75607 178 aaKnown RBP24.18■■□□□ 1.46
USP50-201ENST00000529349 RNF216Q9NWF9 866 aaPredicted RBP23.92■■□□□ 1.42
USP50-201ENST00000529349 HOXD11P31277 338 aaPredicted RBP23.82■■□□□ 1.4
USP50-201ENST00000529349 POTEDQ86YR6 584 aa23.82■■□□□ 1.4
USP50-201ENST00000529349 DCAF8L1A6NGE4 600 aa23.46■■□□□ 1.35
USP50-201ENST00000529349 SLC4A1APQ9BWU0 796 aaKnown RBP23.45■■□□□ 1.34
USP50-201ENST00000529349 DNAJC5BQ9UF47 199 aa23.24■■□□□ 1.31
USP50-201ENST00000529349 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
USP50-201ENST00000529349 SLC4A2P04920 1241 aa22.84■■□□□ 1.25
USP50-201ENST00000529349 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.81■■□□□ 1.24
USP50-201ENST00000529349 ZBTB22O15209 634 aa22.71■■□□□ 1.23
USP50-201ENST00000529349 FOXD4L1Q9NU39 408 aa22.61■■□□□ 1.21
USP50-201ENST00000529349 CSRNP3Q8WYN3 585 aa22.56■■□□□ 1.2
USP50-201ENST00000529349 U3KPZ7 1027 aaPredicted RBP22.41■■□□□ 1.18
USP50-201ENST00000529349 RNF39Q9H2S5 420 aa22.37■■□□□ 1.17
USP50-201ENST00000529349 MYCNP04198 464 aaPredicted RBP22.27■■□□□ 1.16
USP50-201ENST00000529349 C1QBPQ07021 282 aaKnown RBP22.07■■□□□ 1.12
USP50-201ENST00000529349 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.01■■□□□ 1.11
USP50-201ENST00000529349 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
USP50-201ENST00000529349 SAMD1Q6SPF0 538 aaPredicted RBP21.97■■□□□ 1.11
USP50-201ENST00000529349 CACNB1Q02641 598 aaPredicted RBP21.86■■□□□ 1.09
USP50-201ENST00000529349 SPINK5Q9NQ38 1064 aaPredicted RBP21.85■■□□□ 1.09
USP50-201ENST00000529349 ATF5Q9Y2D1 282 aaPredicted RBP21.82■■□□□ 1.08
USP50-201ENST00000529349 APLP2Q06481 763 aa21.75■■□□□ 1.07
USP50-201ENST00000529349 CAPN15O75808 1086 aa21.74■■□□□ 1.07
USP50-201ENST00000529349 ATXN8OSP0DMR3 200 aa21.74■■□□□ 1.07
USP50-201ENST00000529349 TRHP20396 242 aaPredicted RBP21.68■■□□□ 1.06
USP50-201ENST00000529349 ZNF219Q9P2Y4 722 aaPredicted RBP21.51■■□□□ 1.03
USP50-201ENST00000529349 ABCB7O75027 752 aa21.39■■□□□ 1.01
USP50-201ENST00000529349 DSG3P32926 999 aa21.32■■□□□ 1
USP50-201ENST00000529349 POLA2Q14181 598 aa21.3■■□□□ 1
USP50-201ENST00000529349 MKRN4PQ13434 485 aaPredicted RBP20.83■□□□□ 0.93
USP50-201ENST00000529349 FBLN2P98095 1184 aa20.79■□□□□ 0.92
USP50-201ENST00000529349 ZBTB12Q9Y330 459 aaPredicted RBP20.78■□□□□ 0.92
USP50-201ENST00000529349 OSCARQ8IYS5 282 aa20.56■□□□□ 0.88
USP50-201ENST00000529349 FKBP8Q14318 412 aa20.42■□□□□ 0.86
USP50-201ENST00000529349 SPDYE4A6NLX3 237 aa20.34■□□□□ 0.85
USP50-201ENST00000529349 ZNF692Q9BU19 519 aaPredicted RBP20.29■□□□□ 0.84
USP50-201ENST00000529349 SPDYE2BA6NHP3 402 aa20.27■□□□□ 0.84
USP50-201ENST00000529349 SPDYE6P0CI01 402 aa20.27■□□□□ 0.84
USP50-201ENST00000529349 SPDYE2Q495Y8 402 aa20.27■□□□□ 0.84
USP50-201ENST00000529349 RBM42Q9BTD8 480 aaKnown RBP20.22■□□□□ 0.83
USP50-201ENST00000529349 SSUH2Q9Y2M2 353 aa20.12■□□□□ 0.81
USP50-201ENST00000529349 PABPN1Q86U42 306 aaKnown RBP eCLIP20.02■□□□□ 0.8
USP50-201ENST00000529349 AKT1S1Q96B36 256 aa20.01■□□□□ 0.79
USP50-201ENST00000529349 REM2Q8IYK8 340 aaPredicted RBP19.9■□□□□ 0.78
USP50-201ENST00000529349 PROM2Q8N271 834 aa19.9■□□□□ 0.78
USP50-201ENST00000529349 CLEC11AQ9Y240 323 aa19.73■□□□□ 0.75
USP50-201ENST00000529349 SPDYE1Q8NFV5 336 aaPredicted RBP19.69■□□□□ 0.74
USP50-201ENST00000529349 PITPNM1O00562 1244 aa19.67■□□□□ 0.74
USP50-201ENST00000529349 STAG3Q9UJ98 1225 aa19.58■□□□□ 0.72
USP50-201ENST00000529349 FBXO3Q9UK99 471 aa19.57■□□□□ 0.72
USP50-201ENST00000529349 PRR29P0C7W0 189 aa19.49■□□□□ 0.71
USP50-201ENST00000529349 CHRDL2Q6WN34 429 aa19.47■□□□□ 0.71
USP50-201ENST00000529349 VASPP50552 380 aaPredicted RBP19.36■□□□□ 0.69
USP50-201ENST00000529349 MIER1Q8N108 512 aa19.35■□□□□ 0.69
USP50-201ENST00000529349 PLCD3Q8N3E9 789 aa19.29■□□□□ 0.68
USP50-201ENST00000529349 CHADLQ6NUI6 762 aa19.26■□□□□ 0.67
USP50-201ENST00000529349 FXR2P51116 673 aaKnown RBP eCLIP19.25■□□□□ 0.67
USP50-201ENST00000529349 PIP4P2Q8N4L2 257 aa19.25■□□□□ 0.67
USP50-201ENST00000529349 CREBZFQ9NS37 354 aa19.24■□□□□ 0.67
USP50-201ENST00000529349 PRKAR2AP13861 404 aaKnown RBP19.2■□□□□ 0.66
USP50-201ENST00000529349 IFNLR1Q8IU57 520 aaPredicted RBP19.14■□□□□ 0.65
USP50-201ENST00000529349 PLEKHG5O94827 1062 aa19.13■□□□□ 0.65
USP50-201ENST00000529349 KLHL34Q8N239 644 aa19.12■□□□□ 0.65
USP50-201ENST00000529349 MNX1P50219 401 aaPredicted RBP19.02■□□□□ 0.64
USP50-201ENST00000529349 FARP1Q9Y4F1 1045 aaPredicted RBP18.99■□□□□ 0.63
USP50-201ENST00000529349 ZBTB47Q9UFB7 747 aaPredicted RBP18.94■□□□□ 0.62
USP50-201ENST00000529349 SPOCK2Q92563 424 aa18.88■□□□□ 0.61
USP50-201ENST00000529349 NPM1P06748 294 aaKnown RBP eCLIP18.86■□□□□ 0.61
USP50-201ENST00000529349 POTEHQ6S545 545 aa18.86■□□□□ 0.61
USP50-201ENST00000529349 NUBP1P53384 320 aa18.79■□□□□ 0.6
USP50-201ENST00000529349 RASEFQ8IZ41 740 aa18.74■□□□□ 0.59
USP50-201ENST00000529349 TSPYL2Q9H2G4 693 aaPredicted RBP18.69■□□□□ 0.58
USP50-201ENST00000529349 HAX1O00165 279 aa18.67■□□□□ 0.58
USP50-201ENST00000529349 DCAF8Q5TAQ9 597 aa18.67■□□□□ 0.58
USP50-201ENST00000529349 CIZ1Q9ULV3 898 aaPredicted RBP18.66■□□□□ 0.58
USP50-201ENST00000529349 CD44P16070 742 aaKnown RBP18.63■□□□□ 0.57
USP50-201ENST00000529349 C19orf67A6NJJ6 358 aa18.6■□□□□ 0.57
USP50-201ENST00000529349 FAM212AQ96EL1 285 aa18.6■□□□□ 0.57
USP50-201ENST00000529349 RTN4Q9NQC3 1192 aaKnown RBP18.59■□□□□ 0.57
USP50-201ENST00000529349 EVX2Q03828 476 aa18.56■□□□□ 0.56
USP50-201ENST00000529349 ZRANB1Q9UGI0 708 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms