RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 COL23A1Q86Y22 540 aaPredicted RBP16.3■□□□□ 0.2
COPB1-206ENST00000529210 ARXQ96QS3 562 aa16.3■□□□□ 0.2
COPB1-206ENST00000529210 MRC1P22897 1456 aa16.29■□□□□ 0.2
COPB1-206ENST00000529210 AKAP4Q5JQC9 854 aa16.29■□□□□ 0.2
COPB1-206ENST00000529210 SYT17Q9BSW7 474 aa16.29■□□□□ 0.2
COPB1-206ENST00000529210 COL5A3P25940 1745 aaPredicted RBP16.28■□□□□ 0.2
COPB1-206ENST00000529210 FHDC1Q9C0D6 1143 aaPredicted RBP16.28■□□□□ 0.2
COPB1-206ENST00000529210 SSFA2P28290 1259 aa16.27■□□□□ 0.2
COPB1-206ENST00000529210 POLD1P28340 1107 aa16.27■□□□□ 0.2
COPB1-206ENST00000529210 ITPK1Q13572 414 aa16.27■□□□□ 0.2
COPB1-206ENST00000529210 LINC00116Q8NCU8 138 aa16.27■□□□□ 0.2
COPB1-206ENST00000529210 VIRMAQ69YN4 1812 aaKnown RBP16.26■□□□□ 0.19
COPB1-206ENST00000529210 ATP6V1AP38606 617 aa16.26■□□□□ 0.19
COPB1-206ENST00000529210 CABP4P57796 275 aa16.26■□□□□ 0.19
COPB1-206ENST00000529210 POTEDQ86YR6 584 aa16.26■□□□□ 0.19
COPB1-206ENST00000529210 AK7Q96M32 723 aa16.26■□□□□ 0.19
COPB1-206ENST00000529210 HMOX1P09601 288 aa16.25■□□□□ 0.19
COPB1-206ENST00000529210 RC3H1Q5TC82 1133 aaKnown RBP16.25■□□□□ 0.19
COPB1-206ENST00000529210 SLC4A9Q96Q91 983 aa16.25■□□□□ 0.19
COPB1-206ENST00000529210 AMIGO3Q86WK7 504 aa16.24■□□□□ 0.19
COPB1-206ENST00000529210 NFATC2IPQ8NCF5 419 aa16.24■□□□□ 0.19
COPB1-206ENST00000529210 UTRNP46939 3433 aa16.24■□□□□ 0.19
COPB1-206ENST00000529210 CNTNAP4Q9C0A0 1308 aa16.23■□□□□ 0.19
COPB1-206ENST00000529210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.23■□□□□ 0.19
COPB1-206ENST00000529210 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
COPB1-206ENST00000529210 PPP2R1AP30153 589 aa16.23■□□□□ 0.19
COPB1-206ENST00000529210 MTHFSDQ2M296 383 aaKnown RBP16.23■□□□□ 0.19
COPB1-206ENST00000529210 CFAP53Q96M91 514 aa16.23■□□□□ 0.19
COPB1-206ENST00000529210 SLC52A2Q9HAB3 445 aa16.23■□□□□ 0.19
COPB1-206ENST00000529210 RNMTO43148 476 aaKnown RBP16.22■□□□□ 0.19
COPB1-206ENST00000529210 LGR6Q9HBX8 967 aa16.21■□□□□ 0.19
COPB1-206ENST00000529210 TJP1Q07157 1748 aa16.21■□□□□ 0.19
COPB1-206ENST00000529210 MYH14Q7Z406 1995 aaKnown RBP16.2■□□□□ 0.18
COPB1-206ENST00000529210 GNPATO15228 680 aa16.2■□□□□ 0.18
COPB1-206ENST00000529210 GAS2L2Q8NHY3 880 aa16.2■□□□□ 0.18
COPB1-206ENST00000529210 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
COPB1-206ENST00000529210 UBR2Q8IWV8 1755 aa16.19■□□□□ 0.18
COPB1-206ENST00000529210 U2SURPO15042 1029 aaKnown RBP16.19■□□□□ 0.18
COPB1-206ENST00000529210 NUDCQ9Y266 331 aa16.19■□□□□ 0.18
COPB1-206ENST00000529210 SIPA1L3O60292 1781 aaPredicted RBP16.18■□□□□ 0.18
COPB1-206ENST00000529210 RPS6KA4O75676 772 aa16.18■□□□□ 0.18
COPB1-206ENST00000529210 RSPH6AQ9H0K4 717 aa16.18■□□□□ 0.18
COPB1-206ENST00000529210 RTCBQ9Y3I0 505 aaKnown RBP16.18■□□□□ 0.18
COPB1-206ENST00000529210 KCPQ6ZWJ8 1503 aa16.18■□□□□ 0.18
COPB1-206ENST00000529210 CEMIPQ8WUJ3 1361 aa16.17■□□□□ 0.18
COPB1-206ENST00000529210 PHF14O94880 888 aa16.17■□□□□ 0.18
COPB1-206ENST00000529210 CD2APQ9Y5K6 639 aa16.17■□□□□ 0.18
COPB1-206ENST00000529210 GNAT3A8MTJ3 354 aa16.16■□□□□ 0.18
COPB1-206ENST00000529210 PTCD1O75127 700 aaKnown RBP16.16■□□□□ 0.18
COPB1-206ENST00000529210 FCHSD2O94868 740 aa16.16■□□□□ 0.18
COPB1-206ENST00000529210 CNGB1Q14028 1251 aaPredicted RBP16.16■□□□□ 0.18
COPB1-206ENST00000529210 MSL1Q68DK7 614 aa16.16■□□□□ 0.18
COPB1-206ENST00000529210 VSIG10Q8N0Z9 540 aa16.16■□□□□ 0.18
COPB1-206ENST00000529210 C4AP0C0L4 1744 aa16.16■□□□□ 0.18
COPB1-206ENST00000529210 CHD4Q14839 1912 aa16.15■□□□□ 0.18
COPB1-206ENST00000529210 TRAPPC3LQ5T215 181 aa16.15■□□□□ 0.18
COPB1-206ENST00000529210 GOLGB1Q14789 3259 aaKnown RBP16.15■□□□□ 0.18
COPB1-206ENST00000529210 PRKAR2BP31323 418 aa16.14■□□□□ 0.17
COPB1-206ENST00000529210 CRKLP46109 303 aaKnown RBP16.14■□□□□ 0.17
COPB1-206ENST00000529210 SMIM5Q71RC9 77 aa16.14■□□□□ 0.17
COPB1-206ENST00000529210 IL17REQ8NFR9 667 aa16.14■□□□□ 0.17
COPB1-206ENST00000529210 PHACTR3Q96KR7 559 aa16.14■□□□□ 0.17
COPB1-206ENST00000529210 KIF13BQ9NQT8 1826 aa16.13■□□□□ 0.17
COPB1-206ENST00000529210 YY1P25490 414 aa16.13■□□□□ 0.17
COPB1-206ENST00000529210 NLGN2Q8NFZ4 835 aa16.13■□□□□ 0.17
COPB1-206ENST00000529210 ARHGEF1Q92888 912 aaKnown RBP16.13■□□□□ 0.17
COPB1-206ENST00000529210 U2AF1L5P0DN76 240 aaPredicted RBP16.12■□□□□ 0.17
COPB1-206ENST00000529210 U2AF1Q01081 240 aaKnown RBP eCLIP16.12■□□□□ 0.17
COPB1-206ENST00000529210 SLC39A6Q13433 755 aa16.12■□□□□ 0.17
COPB1-206ENST00000529210 INTS5Q6P9B9 1019 aaKnown RBP16.12■□□□□ 0.17
COPB1-206ENST00000529210 NLGN1Q8N2Q7 840 aa16.12■□□□□ 0.17
COPB1-206ENST00000529210 CYP19A1P11511 503 aaPredicted RBP16.11■□□□□ 0.17
COPB1-206ENST00000529210 GYS1P13807 737 aa16.11■□□□□ 0.17
COPB1-206ENST00000529210 TEFQ10587 303 aa16.11■□□□□ 0.17
COPB1-206ENST00000529210 RALBP1Q15311 655 aa16.11■□□□□ 0.17
COPB1-206ENST00000529210 DNAJC10Q8IXB1 793 aa16.11■□□□□ 0.17
COPB1-206ENST00000529210 HTATSF1O43719 755 aaKnown RBP16.1■□□□□ 0.17
COPB1-206ENST00000529210 RFC4P35249 363 aa16.1■□□□□ 0.17
COPB1-206ENST00000529210 ZNF790Q6PG37 636 aa16.1■□□□□ 0.17
COPB1-206ENST00000529210 CCDC87Q9NVE4 849 aa16.1■□□□□ 0.17
COPB1-206ENST00000529210 KLHL34Q8N239 644 aa16.09■□□□□ 0.17
COPB1-206ENST00000529210 SOS1Q07889 1333 aaPredicted RBP16.09■□□□□ 0.17
COPB1-206ENST00000529210 USP42Q9H9J4 1324 aaKnown RBP16.09■□□□□ 0.17
COPB1-206ENST00000529210 MMP10P09238 476 aa16.08■□□□□ 0.16
COPB1-206ENST00000529210 GPR162Q16538 588 aa16.08■□□□□ 0.16
COPB1-206ENST00000529210 TTC5Q8N0Z6 440 aa16.08■□□□□ 0.16
COPB1-206ENST00000529210 HEG1Q9ULI3 1381 aa16.08■□□□□ 0.16
COPB1-206ENST00000529210 KIAA1551Q9HCM1 1747 aa16.08■□□□□ 0.16
COPB1-206ENST00000529210 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
COPB1-206ENST00000529210 C10orf71Q711Q0 1435 aa16.07■□□□□ 0.16
COPB1-206ENST00000529210 GRIN3BO60391 1043 aa16.06■□□□□ 0.16
COPB1-206ENST00000529210 ZNF496Q96IT1 587 aaPredicted RBP16.06■□□□□ 0.16
COPB1-206ENST00000529210 PLEKHF1Q96S99 279 aa16.06■□□□□ 0.16
COPB1-206ENST00000529210 COL15A1P39059 1388 aa16.05■□□□□ 0.16
COPB1-206ENST00000529210 STARD3NLO95772 234 aa16.05■□□□□ 0.16
COPB1-206ENST00000529210 YBX3P16989 372 aaKnown RBP eCLIP16.05■□□□□ 0.16
COPB1-206ENST00000529210 ZBTB1Q9Y2K1 713 aa16.05■□□□□ 0.16
COPB1-206ENST00000529210 DLG5Q8TDM6 1919 aa16.05■□□□□ 0.16
COPB1-206ENST00000529210 TGFB2P61812 414 aa16.04■□□□□ 0.16
COPB1-206ENST00000529210 RTF1Q92541 710 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms