RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 ZSCAN1Q8NBB4 408 aa9.26□□□□□ -0.93
CSDE1-212ENST00000529046 CALR3Q96L12 384 aaKnown RBP9.26□□□□□ -0.93
CSDE1-212ENST00000529046 FHDC1Q9C0D6 1143 aaPredicted RBP9.26□□□□□ -0.93
CSDE1-212ENST00000529046 DYRK1BQ9Y463 629 aa9.26□□□□□ -0.93
CSDE1-212ENST00000529046 USP17L5A8MUK1 530 aa9.25□□□□□ -0.93
CSDE1-212ENST00000529046 SCNN1DP51172 638 aa9.25□□□□□ -0.93
CSDE1-212ENST00000529046 NCOA4Q13772 614 aa9.25□□□□□ -0.93
CSDE1-212ENST00000529046 TLR1Q15399 786 aa9.25□□□□□ -0.93
CSDE1-212ENST00000529046 GNASQ5JWF2 1037 aa9.25□□□□□ -0.93
CSDE1-212ENST00000529046 TMEM214Q6NUQ4 689 aaKnown RBP9.25□□□□□ -0.93
CSDE1-212ENST00000529046 CCDC82Q8N4S0 544 aa9.25□□□□□ -0.93
CSDE1-212ENST00000529046 TIMMDC1Q9NPL8 285 aa9.25□□□□□ -0.93
CSDE1-212ENST00000529046 CUEDC1Q9NWM3 386 aaPredicted RBP9.25□□□□□ -0.93
CSDE1-212ENST00000529046 SERPINA10Q9UK55 444 aa9.25□□□□□ -0.93
CSDE1-212ENST00000529046 NOD1Q9Y239 953 aa9.25□□□□□ -0.93
CSDE1-212ENST00000529046 INHAP05111 366 aa9.24□□□□□ -0.93
CSDE1-212ENST00000529046 RIPOR1Q6ZS17 1223 aa9.24□□□□□ -0.93
CSDE1-212ENST00000529046 GAS2L1Q99501 681 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-212ENST00000529046 COL25A1Q9BXS0 654 aaPredicted RBP9.24□□□□□ -0.93
CSDE1-212ENST00000529046 DEPDC4Q8N2C3 294 aa9.23□□□□□ -0.93
CSDE1-212ENST00000529046 CNTNAP3BQ96NU0 1288 aa9.23□□□□□ -0.93
CSDE1-212ENST00000529046 CNTNAP3Q9BZ76 1288 aa9.23□□□□□ -0.93
CSDE1-212ENST00000529046 LORP23490 312 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-212ENST00000529046 PHKA2P46019 1235 aa9.22□□□□□ -0.93
CSDE1-212ENST00000529046 KRT76Q01546 638 aa9.22□□□□□ -0.93
CSDE1-212ENST00000529046 TRIM22Q8IYM9 498 aa9.22□□□□□ -0.93
CSDE1-212ENST00000529046 ZNF837Q96EG3 531 aaPredicted RBP9.22□□□□□ -0.93
CSDE1-212ENST00000529046 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
CSDE1-212ENST00000529046 PCDHGA11Q9Y5H2 935 aa9.22□□□□□ -0.93
CSDE1-212ENST00000529046 FAM181BA6NEQ2 426 aa9.21□□□□□ -0.94
CSDE1-212ENST00000529046 H7C1W4 665 aa9.21□□□□□ -0.94
CSDE1-212ENST00000529046 GTF2IP78347 998 aa9.21□□□□□ -0.94
CSDE1-212ENST00000529046 PSME1Q06323 249 aa9.21□□□□□ -0.94
CSDE1-212ENST00000529046 C4orf17Q53FE4 359 aa9.21□□□□□ -0.94
CSDE1-212ENST00000529046 CFAP70Q5T0N1 1121 aa9.21□□□□□ -0.94
CSDE1-212ENST00000529046 TBC1D9Q6ZT07 1266 aa9.21□□□□□ -0.94
CSDE1-212ENST00000529046 RHBDD1Q8TEB9 315 aa9.21□□□□□ -0.94
CSDE1-212ENST00000529046 PPP1R12CQ9BZL4 782 aa9.21□□□□□ -0.94
CSDE1-212ENST00000529046 TMEM229AB2RXF0 380 aa9.2□□□□□ -0.94
CSDE1-212ENST00000529046 ATP9BO43861 1147 aa9.2□□□□□ -0.94
CSDE1-212ENST00000529046 F11P03951 625 aa9.2□□□□□ -0.94
CSDE1-212ENST00000529046 SRPK2P78362 688 aaKnown RBP9.2□□□□□ -0.94
CSDE1-212ENST00000529046 RNFT1Q5M7Z0 435 aa9.2□□□□□ -0.94
CSDE1-212ENST00000529046 PPARGC1BQ86YN6 1023 aaKnown RBP9.2□□□□□ -0.94
CSDE1-212ENST00000529046 PLEKHM2Q8IWE5 1019 aa9.2□□□□□ -0.94
CSDE1-212ENST00000529046 SERTAD1Q9UHV2 236 aa9.2□□□□□ -0.94
CSDE1-212ENST00000529046 A0A1B0GTH6 734 aa9.19□□□□□ -0.94
CSDE1-212ENST00000529046 USP17L3A6NCW0 530 aa9.19□□□□□ -0.94
CSDE1-212ENST00000529046 USP17L4A6NCW7 530 aa9.19□□□□□ -0.94
CSDE1-212ENST00000529046 SMTNP53814 917 aa9.19□□□□□ -0.94
CSDE1-212ENST00000529046 DBN1Q16643 649 aa9.19□□□□□ -0.94
CSDE1-212ENST00000529046 FOXR1Q6PIV2 292 aa9.19□□□□□ -0.94
CSDE1-212ENST00000529046 USP17L2Q6R6M4 530 aa9.19□□□□□ -0.94
CSDE1-212ENST00000529046 USP17L1Q7RTZ2 530 aa9.19□□□□□ -0.94
CSDE1-212ENST00000529046 PALM3A6NDB9 673 aaPredicted RBP9.18□□□□□ -0.94
CSDE1-212ENST00000529046 TRIM50Q86XT4 487 aa9.18□□□□□ -0.94
CSDE1-212ENST00000529046 GPAMQ9HCL2 828 aa9.18□□□□□ -0.94
CSDE1-212ENST00000529046 MAFBQ9Y5Q3 323 aaPredicted RBP9.18□□□□□ -0.94
CSDE1-212ENST00000529046 CCDC97Q96F63 343 aaPredicted RBP9.17□□□□□ -0.94
CSDE1-212ENST00000529046 SLC4A9Q96Q91 983 aa9.17□□□□□ -0.94
CSDE1-212ENST00000529046 NUCKS1Q9H1E3 243 aaKnown RBP9.17□□□□□ -0.94
CSDE1-212ENST00000529046 TFIP11Q9UBB9 837 aaKnown RBP9.17□□□□□ -0.94
CSDE1-212ENST00000529046 GPR25O00155 361 aa9.16□□□□□ -0.94
CSDE1-212ENST00000529046 BACH1O14867 736 aa9.16□□□□□ -0.94
CSDE1-212ENST00000529046 PLA2G4AP47712 749 aa9.16□□□□□ -0.94
CSDE1-212ENST00000529046 ATP1A2P50993 1020 aa9.16□□□□□ -0.94
CSDE1-212ENST00000529046 GTPBP3Q969Y2 492 aaKnown RBP9.16□□□□□ -0.94
CSDE1-212ENST00000529046 TRERF1Q96PN7 1200 aa9.16□□□□□ -0.94
CSDE1-212ENST00000529046 A6NJY4 79 aa9.15□□□□□ -0.94
CSDE1-212ENST00000529046 GAS6Q14393 721 aa9.15□□□□□ -0.94
CSDE1-212ENST00000529046 MTFR1Q15390 333 aa9.15□□□□□ -0.94
CSDE1-212ENST00000529046 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.15□□□□□ -0.94
CSDE1-212ENST00000529046 NIFKQ9BYG3 293 aaKnown RBP9.15□□□□□ -0.94
CSDE1-212ENST00000529046 ZNF358Q9NW07 568 aa9.15□□□□□ -0.94
CSDE1-212ENST00000529046 CSB-PGBD3P0DP91 1061 aa9.14□□□□□ -0.95
CSDE1-212ENST00000529046 MSX1P28360 303 aa9.14□□□□□ -0.95
CSDE1-212ENST00000529046 PGBD3Q8N328 593 aa9.14□□□□□ -0.95
CSDE1-212ENST00000529046 CDK2AP1O14519 115 aa9.13□□□□□ -0.95
CSDE1-212ENST00000529046 TPCN2Q8NHX9 752 aa9.13□□□□□ -0.95
CSDE1-212ENST00000529046 MKRN1Q9UHC7 482 aaKnown RBP9.13□□□□□ -0.95
CSDE1-212ENST00000529046 SLURP2P0DP57 97 aa9.12□□□□□ -0.95
CSDE1-212ENST00000529046 CLDN10P78369 228 aa9.12□□□□□ -0.95
CSDE1-212ENST00000529046 SRSF11Q05519 484 aaKnown RBP9.12□□□□□ -0.95
CSDE1-212ENST00000529046 LBRQ14739 615 aaKnown RBP9.12□□□□□ -0.95
CSDE1-212ENST00000529046 KANK4Q5T7N3 995 aaPredicted RBP9.12□□□□□ -0.95
CSDE1-212ENST00000529046 OGFOD1Q8N543 542 aa9.12□□□□□ -0.95
CSDE1-212ENST00000529046 RUBCNLQ9H714 662 aa9.12□□□□□ -0.95
CSDE1-212ENST00000529046 MBIPQ9NS73 344 aa9.12□□□□□ -0.95
CSDE1-212ENST00000529046 DNAAF2Q9NVR5 837 aaKnown RBP9.12□□□□□ -0.95
CSDE1-212ENST00000529046 IQSEC3Q9UPP2 1182 aaPredicted RBP9.12□□□□□ -0.95
CSDE1-212ENST00000529046 KIAA1024Q9UPX6 916 aa9.12□□□□□ -0.95
CSDE1-212ENST00000529046 USP3Q9Y6I4 520 aa9.12□□□□□ -0.95
CSDE1-212ENST00000529046 ADAMTS2O95450 1211 aa9.11□□□□□ -0.95
CSDE1-212ENST00000529046 THBS1P07996 1170 aa9.11□□□□□ -0.95
CSDE1-212ENST00000529046 EFHC2Q5JST6 749 aa9.11□□□□□ -0.95
CSDE1-212ENST00000529046 CCDC102BQ68D86 513 aa9.11□□□□□ -0.95
CSDE1-212ENST00000529046 AIDAQ96BJ3 306 aa9.11□□□□□ -0.95
CSDE1-212ENST00000529046 CABP1Q9NZU7 370 aa9.11□□□□□ -0.95
CSDE1-212ENST00000529046 ZBTB7BO15156 539 aaPredicted RBP9.1□□□□□ -0.95
CSDE1-212ENST00000529046 PPP1R15AO75807 674 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms